Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trav12d-1A0N8R0 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.69■□□□□ 0.58
Trav12d-1A0N8R0 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Trav12d-1A0N8R0 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trav12d-1A0N8R0 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.68■□□□□ 0.58
Trav12d-1A0N8R0 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav12d-1A0N8R0 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav12d-1A0N8R0 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
Trav12d-1A0N8R0 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav12d-1A0N8R0 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.68■□□□□ 0.58
Trav12d-1A0N8R0 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav12d-1A0N8R0 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trav12d-1A0N8R0 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav12d-1A0N8R0 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav12d-1A0N8R0 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav12d-1A0N8R0 Gm24970-201ENSMUST00000175582 82 ntBASIC18.66■□□□□ 0.58
Trav12d-1A0N8R0 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC18.66■□□□□ 0.58
Trav12d-1A0N8R0 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC18.66■□□□□ 0.58
Trav12d-1A0N8R0 Gm30023-201ENSMUST00000197970 889 ntBASIC18.66■□□□□ 0.58
Trav12d-1A0N8R0 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18.66■□□□□ 0.58
Trav12d-1A0N8R0 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav12d-1A0N8R0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav12d-1A0N8R0 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trav12d-1A0N8R0 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav12d-1A0N8R0 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Trav12d-1A0N8R0 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trav12d-1A0N8R0 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav12d-1A0N8R0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav12d-1A0N8R0 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav12d-1A0N8R0 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trav12d-1A0N8R0 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav12d-1A0N8R0 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trav12d-1A0N8R0 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trav12d-1A0N8R0 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trav12d-1A0N8R0 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trav12d-1A0N8R0 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trav12d-1A0N8R0 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Trav12d-1A0N8R0 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav12d-1A0N8R0 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18.62■□□□□ 0.57
Trav12d-1A0N8R0 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trav12d-1A0N8R0 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Trav12d-1A0N8R0 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trav12d-1A0N8R0 Gm9397-201ENSMUST00000200125 605 ntBASIC18.61■□□□□ 0.57
Trav12d-1A0N8R0 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav12d-1A0N8R0 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav12d-1A0N8R0 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav12d-1A0N8R0 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trav12d-1A0N8R0 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC18.6■□□□□ 0.57
Trav12d-1A0N8R0 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
Trav12d-1A0N8R0 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav12d-1A0N8R0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav12d-1A0N8R0 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
Trav12d-1A0N8R0 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Trav12d-1A0N8R0 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trav12d-1A0N8R0 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Trav12d-1A0N8R0 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Trav12d-1A0N8R0 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trav12d-1A0N8R0 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC18.58■□□□□ 0.56
Trav12d-1A0N8R0 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav12d-1A0N8R0 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav12d-1A0N8R0 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Trav12d-1A0N8R0 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Trav12d-1A0N8R0 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav12d-1A0N8R0 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav12d-1A0N8R0 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav12d-1A0N8R0 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav12d-1A0N8R0 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav12d-1A0N8R0 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.55■□□□□ 0.56
Trav12d-1A0N8R0 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Trav12d-1A0N8R0 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav12d-1A0N8R0 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav12d-1A0N8R0 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav12d-1A0N8R0 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav12d-1A0N8R0 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC18.54■□□□□ 0.56
Trav12d-1A0N8R0 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav12d-1A0N8R0 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Trav12d-1A0N8R0 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav12d-1A0N8R0 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Trav12d-1A0N8R0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav12d-1A0N8R0 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Trav12d-1A0N8R0 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.55
Trav12d-1A0N8R0 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.52■□□□□ 0.55
Trav12d-1A0N8R0 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav12d-1A0N8R0 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav12d-1A0N8R0 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Trav12d-1A0N8R0 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav12d-1A0N8R0 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav12d-1A0N8R0 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.5■□□□□ 0.55
Trav12d-1A0N8R0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Trav12d-1A0N8R0 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav12d-1A0N8R0 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav12d-1A0N8R0 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav12d-1A0N8R0 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trav12d-1A0N8R0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trav12d-1A0N8R0 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav12d-1A0N8R0 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav12d-1A0N8R0 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Trav12d-1A0N8R0 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.48■□□□□ 0.55
Trav12d-1A0N8R0 Tdp2-203ENSMUST00000223804 1136 ntBASIC18.48■□□□□ 0.55
Trav12d-1A0N8R0 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms