Protein–RNA interactions for Protein: A0A0G2JEV5

Trav7-1, T cell receptor alpha variable 7-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1A0A0G2JEV5 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav7-1A0A0G2JEV5 Gm30023-201ENSMUST00000197970 889 ntBASIC17.85■□□□□ 0.45
Trav7-1A0A0G2JEV5 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.85■□□□□ 0.45
Trav7-1A0A0G2JEV5 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
Trav7-1A0A0G2JEV5 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav7-1A0A0G2JEV5 Gm37847-201ENSMUST00000192163 1497 ntBASIC17.84■□□□□ 0.45
Trav7-1A0A0G2JEV5 Gm31748-201ENSMUST00000194938 1497 ntBASIC17.84■□□□□ 0.45
Trav7-1A0A0G2JEV5 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav7-1A0A0G2JEV5 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav7-1A0A0G2JEV5 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC17.83■□□□□ 0.45
Trav7-1A0A0G2JEV5 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Trav7-1A0A0G2JEV5 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trav7-1A0A0G2JEV5 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC17.83■□□□□ 0.44
Trav7-1A0A0G2JEV5 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav7-1A0A0G2JEV5 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav7-1A0A0G2JEV5 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav7-1A0A0G2JEV5 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav7-1A0A0G2JEV5 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav7-1A0A0G2JEV5 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trav7-1A0A0G2JEV5 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav7-1A0A0G2JEV5 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav7-1A0A0G2JEV5 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav7-1A0A0G2JEV5 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav7-1A0A0G2JEV5 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav7-1A0A0G2JEV5 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
Trav7-1A0A0G2JEV5 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav7-1A0A0G2JEV5 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav7-1A0A0G2JEV5 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav7-1A0A0G2JEV5 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav7-1A0A0G2JEV5 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav7-1A0A0G2JEV5 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav7-1A0A0G2JEV5 Particl-201ENSMUST00000205370 1560 ntBASIC17.78■□□□□ 0.44
Trav7-1A0A0G2JEV5 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav7-1A0A0G2JEV5 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav7-1A0A0G2JEV5 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav7-1A0A0G2JEV5 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav7-1A0A0G2JEV5 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC17.77■□□□□ 0.44
Trav7-1A0A0G2JEV5 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav7-1A0A0G2JEV5 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17.76■□□□□ 0.43
Trav7-1A0A0G2JEV5 Tdp2-203ENSMUST00000223804 1136 ntBASIC17.76■□□□□ 0.43
Trav7-1A0A0G2JEV5 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav7-1A0A0G2JEV5 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav7-1A0A0G2JEV5 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav7-1A0A0G2JEV5 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav7-1A0A0G2JEV5 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Trav7-1A0A0G2JEV5 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC17.74■□□□□ 0.43
Trav7-1A0A0G2JEV5 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav7-1A0A0G2JEV5 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
Trav7-1A0A0G2JEV5 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav7-1A0A0G2JEV5 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav7-1A0A0G2JEV5 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav7-1A0A0G2JEV5 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav7-1A0A0G2JEV5 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Trav7-1A0A0G2JEV5 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav7-1A0A0G2JEV5 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav7-1A0A0G2JEV5 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Trav7-1A0A0G2JEV5 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav7-1A0A0G2JEV5 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav7-1A0A0G2JEV5 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav7-1A0A0G2JEV5 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav7-1A0A0G2JEV5 Gm45855-201ENSMUST00000212546 880 ntBASIC17.7■□□□□ 0.42
Trav7-1A0A0G2JEV5 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav7-1A0A0G2JEV5 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav7-1A0A0G2JEV5 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav7-1A0A0G2JEV5 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav7-1A0A0G2JEV5 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav7-1A0A0G2JEV5 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav7-1A0A0G2JEV5 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trav7-1A0A0G2JEV5 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trav7-1A0A0G2JEV5 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav7-1A0A0G2JEV5 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav7-1A0A0G2JEV5 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav7-1A0A0G2JEV5 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav7-1A0A0G2JEV5 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav7-1A0A0G2JEV5 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav7-1A0A0G2JEV5 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav7-1A0A0G2JEV5 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav7-1A0A0G2JEV5 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav7-1A0A0G2JEV5 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC17.66■□□□□ 0.42
Trav7-1A0A0G2JEV5 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trav7-1A0A0G2JEV5 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav7-1A0A0G2JEV5 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trav7-1A0A0G2JEV5 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trav7-1A0A0G2JEV5 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav7-1A0A0G2JEV5 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav7-1A0A0G2JEV5 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC17.65■□□□□ 0.42
Trav7-1A0A0G2JEV5 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav7-1A0A0G2JEV5 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Trav7-1A0A0G2JEV5 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trav7-1A0A0G2JEV5 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trav7-1A0A0G2JEV5 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav7-1A0A0G2JEV5 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav7-1A0A0G2JEV5 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav7-1A0A0G2JEV5 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav7-1A0A0G2JEV5 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trav7-1A0A0G2JEV5 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav7-1A0A0G2JEV5 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Trav7-1A0A0G2JEV5 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav7-1A0A0G2JEV5 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav7-1A0A0G2JEV5 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms