Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav13n-1A0A0G2JEU8 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav13n-1A0A0G2JEU8 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav13n-1A0A0G2JEU8 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav13n-1A0A0G2JEU8 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav13n-1A0A0G2JEU8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav13n-1A0A0G2JEU8 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav13n-1A0A0G2JEU8 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Trav13n-1A0A0G2JEU8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav13n-1A0A0G2JEU8 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav13n-1A0A0G2JEU8 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav13n-1A0A0G2JEU8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trav13n-1A0A0G2JEU8 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trav13n-1A0A0G2JEU8 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav13n-1A0A0G2JEU8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav13n-1A0A0G2JEU8 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Trav13n-1A0A0G2JEU8 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav13n-1A0A0G2JEU8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC16.65■□□□□ 0.26
Trav13n-1A0A0G2JEU8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav13n-1A0A0G2JEU8 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav13n-1A0A0G2JEU8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav13n-1A0A0G2JEU8 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trav13n-1A0A0G2JEU8 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Trav13n-1A0A0G2JEU8 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav13n-1A0A0G2JEU8 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav13n-1A0A0G2JEU8 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Trav13n-1A0A0G2JEU8 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav13n-1A0A0G2JEU8 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Trav13n-1A0A0G2JEU8 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav13n-1A0A0G2JEU8 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav13n-1A0A0G2JEU8 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC16.63■□□□□ 0.25
Trav13n-1A0A0G2JEU8 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trav13n-1A0A0G2JEU8 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav13n-1A0A0G2JEU8 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav13n-1A0A0G2JEU8 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav13n-1A0A0G2JEU8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav13n-1A0A0G2JEU8 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Trav13n-1A0A0G2JEU8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav13n-1A0A0G2JEU8 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav13n-1A0A0G2JEU8 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Trav13n-1A0A0G2JEU8 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC16.6■□□□□ 0.25
Trav13n-1A0A0G2JEU8 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC16.6■□□□□ 0.25
Trav13n-1A0A0G2JEU8 Gm6311-201ENSMUST00000073790 878 ntBASIC16.6■□□□□ 0.25
Trav13n-1A0A0G2JEU8 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav13n-1A0A0G2JEU8 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav13n-1A0A0G2JEU8 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav13n-1A0A0G2JEU8 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC16.6■□□□□ 0.25
Trav13n-1A0A0G2JEU8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC16.6■□□□□ 0.25
Trav13n-1A0A0G2JEU8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Trav13n-1A0A0G2JEU8 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav13n-1A0A0G2JEU8 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav13n-1A0A0G2JEU8 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Trav13n-1A0A0G2JEU8 AC167019.3-201ENSMUST00000228225 1266 ntBASIC16.59■□□□□ 0.25
Trav13n-1A0A0G2JEU8 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Trav13n-1A0A0G2JEU8 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC16.59■□□□□ 0.25
Trav13n-1A0A0G2JEU8 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Trav13n-1A0A0G2JEU8 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav13n-1A0A0G2JEU8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav13n-1A0A0G2JEU8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav13n-1A0A0G2JEU8 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav13n-1A0A0G2JEU8 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav13n-1A0A0G2JEU8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav13n-1A0A0G2JEU8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav13n-1A0A0G2JEU8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav13n-1A0A0G2JEU8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC16.56■□□□□ 0.24
Trav13n-1A0A0G2JEU8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav13n-1A0A0G2JEU8 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav13n-1A0A0G2JEU8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav13n-1A0A0G2JEU8 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav13n-1A0A0G2JEU8 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trav13n-1A0A0G2JEU8 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav13n-1A0A0G2JEU8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav13n-1A0A0G2JEU8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Trav13n-1A0A0G2JEU8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav13n-1A0A0G2JEU8 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trav13n-1A0A0G2JEU8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav13n-1A0A0G2JEU8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
Trav13n-1A0A0G2JEU8 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav13n-1A0A0G2JEU8 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav13n-1A0A0G2JEU8 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
Trav13n-1A0A0G2JEU8 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav13n-1A0A0G2JEU8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav13n-1A0A0G2JEU8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trav13n-1A0A0G2JEU8 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav13n-1A0A0G2JEU8 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Trav13n-1A0A0G2JEU8 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC16.52■□□□□ 0.24
Trav13n-1A0A0G2JEU8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
Trav13n-1A0A0G2JEU8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav13n-1A0A0G2JEU8 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav13n-1A0A0G2JEU8 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav13n-1A0A0G2JEU8 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav13n-1A0A0G2JEU8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trav13n-1A0A0G2JEU8 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC16.5■□□□□ 0.23
Trav13n-1A0A0G2JEU8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav13n-1A0A0G2JEU8 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC16.5■□□□□ 0.23
Trav13n-1A0A0G2JEU8 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trav13n-1A0A0G2JEU8 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC16.49■□□□□ 0.23
Trav13n-1A0A0G2JEU8 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav13n-1A0A0G2JEU8 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav13n-1A0A0G2JEU8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 8.7 ms