Protein–RNA interactions for Protein: A0A0G2JES9

Igkv4-54, Immunoglobulin kappa chain variable 4-54 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-54A0A0G2JES9 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Igkv4-54A0A0G2JES9 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Igkv4-54A0A0G2JES9 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Igkv4-54A0A0G2JES9 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Igkv4-54A0A0G2JES9 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Igkv4-54A0A0G2JES9 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Igkv4-54A0A0G2JES9 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Igkv4-54A0A0G2JES9 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Igkv4-54A0A0G2JES9 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Igkv4-54A0A0G2JES9 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Igkv4-54A0A0G2JES9 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Igkv4-54A0A0G2JES9 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Igkv4-54A0A0G2JES9 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Igkv4-54A0A0G2JES9 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Igkv4-54A0A0G2JES9 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Igkv4-54A0A0G2JES9 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC16.54■□□□□ 0.24
Igkv4-54A0A0G2JES9 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Igkv4-54A0A0G2JES9 Particl-201ENSMUST00000205370 1560 ntBASIC16.54■□□□□ 0.24
Igkv4-54A0A0G2JES9 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC16.53■□□□□ 0.24
Igkv4-54A0A0G2JES9 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Igkv4-54A0A0G2JES9 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Igkv4-54A0A0G2JES9 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Igkv4-54A0A0G2JES9 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Igkv4-54A0A0G2JES9 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Igkv4-54A0A0G2JES9 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Igkv4-54A0A0G2JES9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Igkv4-54A0A0G2JES9 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Igkv4-54A0A0G2JES9 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Igkv4-54A0A0G2JES9 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Igkv4-54A0A0G2JES9 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Igkv4-54A0A0G2JES9 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC16.51■□□□□ 0.23
Igkv4-54A0A0G2JES9 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Igkv4-54A0A0G2JES9 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC16.51■□□□□ 0.23
Igkv4-54A0A0G2JES9 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Igkv4-54A0A0G2JES9 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Igkv4-54A0A0G2JES9 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Igkv4-54A0A0G2JES9 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Igkv4-54A0A0G2JES9 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Igkv4-54A0A0G2JES9 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv4-54A0A0G2JES9 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Igkv4-54A0A0G2JES9 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv4-54A0A0G2JES9 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC16.49■□□□□ 0.23
Igkv4-54A0A0G2JES9 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Igkv4-54A0A0G2JES9 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
Igkv4-54A0A0G2JES9 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Igkv4-54A0A0G2JES9 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Igkv4-54A0A0G2JES9 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC16.48■□□□□ 0.23
Igkv4-54A0A0G2JES9 Gm7432-201ENSMUST00000210343 879 ntBASIC16.48■□□□□ 0.23
Igkv4-54A0A0G2JES9 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Igkv4-54A0A0G2JES9 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC16.47■□□□□ 0.23
Igkv4-54A0A0G2JES9 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv4-54A0A0G2JES9 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv4-54A0A0G2JES9 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Igkv4-54A0A0G2JES9 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
Igkv4-54A0A0G2JES9 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv4-54A0A0G2JES9 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv4-54A0A0G2JES9 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv4-54A0A0G2JES9 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Igkv4-54A0A0G2JES9 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Igkv4-54A0A0G2JES9 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv4-54A0A0G2JES9 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv4-54A0A0G2JES9 AC131739.1-201ENSMUST00000221692 1245 ntBASIC16.45■□□□□ 0.22
Igkv4-54A0A0G2JES9 Gm37847-201ENSMUST00000192163 1497 ntBASIC16.45■□□□□ 0.22
Igkv4-54A0A0G2JES9 Gm31748-201ENSMUST00000194938 1497 ntBASIC16.45■□□□□ 0.22
Igkv4-54A0A0G2JES9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv4-54A0A0G2JES9 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv4-54A0A0G2JES9 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv4-54A0A0G2JES9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv4-54A0A0G2JES9 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Igkv4-54A0A0G2JES9 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv4-54A0A0G2JES9 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Igkv4-54A0A0G2JES9 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv4-54A0A0G2JES9 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv4-54A0A0G2JES9 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv4-54A0A0G2JES9 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv4-54A0A0G2JES9 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv4-54A0A0G2JES9 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv4-54A0A0G2JES9 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv4-54A0A0G2JES9 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
Igkv4-54A0A0G2JES9 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv4-54A0A0G2JES9 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC16.43■□□□□ 0.22
Igkv4-54A0A0G2JES9 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv4-54A0A0G2JES9 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Igkv4-54A0A0G2JES9 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv4-54A0A0G2JES9 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv4-54A0A0G2JES9 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv4-54A0A0G2JES9 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv4-54A0A0G2JES9 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv4-54A0A0G2JES9 Gm11599-201ENSMUST00000118720 878 ntBASIC16.41■□□□□ 0.22
Igkv4-54A0A0G2JES9 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv4-54A0A0G2JES9 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Igkv4-54A0A0G2JES9 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Igkv4-54A0A0G2JES9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC16.4■□□□□ 0.22
Igkv4-54A0A0G2JES9 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Igkv4-54A0A0G2JES9 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Igkv4-54A0A0G2JES9 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Igkv4-54A0A0G2JES9 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Igkv4-54A0A0G2JES9 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Igkv4-54A0A0G2JES9 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Igkv4-54A0A0G2JES9 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms