Protein–RNA interactions for Protein: A0A0B4J1F6

BC053393, cDNA sequence BC053393, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC053393A0A0B4J1F6 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
BC053393A0A0B4J1F6 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BC053393A0A0B4J1F6 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
BC053393A0A0B4J1F6 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BC053393A0A0B4J1F6 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BC053393A0A0B4J1F6 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
BC053393A0A0B4J1F6 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
BC053393A0A0B4J1F6 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.48■□□□□ 0.55
BC053393A0A0B4J1F6 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
BC053393A0A0B4J1F6 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BC053393A0A0B4J1F6 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BC053393A0A0B4J1F6 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BC053393A0A0B4J1F6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
BC053393A0A0B4J1F6 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
BC053393A0A0B4J1F6 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BC053393A0A0B4J1F6 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
BC053393A0A0B4J1F6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
BC053393A0A0B4J1F6 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BC053393A0A0B4J1F6 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18.45■□□□□ 0.54
BC053393A0A0B4J1F6 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BC053393A0A0B4J1F6 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
BC053393A0A0B4J1F6 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
BC053393A0A0B4J1F6 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BC053393A0A0B4J1F6 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BC053393A0A0B4J1F6 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
BC053393A0A0B4J1F6 Gm24970-201ENSMUST00000175582 82 ntBASIC18.43■□□□□ 0.54
BC053393A0A0B4J1F6 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BC053393A0A0B4J1F6 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BC053393A0A0B4J1F6 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
BC053393A0A0B4J1F6 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
BC053393A0A0B4J1F6 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.43■□□□□ 0.54
BC053393A0A0B4J1F6 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
BC053393A0A0B4J1F6 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.42■□□□□ 0.54
BC053393A0A0B4J1F6 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.42■□□□□ 0.54
BC053393A0A0B4J1F6 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BC053393A0A0B4J1F6 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC18.42■□□□□ 0.54
BC053393A0A0B4J1F6 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
BC053393A0A0B4J1F6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
BC053393A0A0B4J1F6 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BC053393A0A0B4J1F6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BC053393A0A0B4J1F6 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
BC053393A0A0B4J1F6 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.41■□□□□ 0.54
BC053393A0A0B4J1F6 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
BC053393A0A0B4J1F6 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.41■□□□□ 0.54
BC053393A0A0B4J1F6 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BC053393A0A0B4J1F6 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BC053393A0A0B4J1F6 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
BC053393A0A0B4J1F6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BC053393A0A0B4J1F6 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BC053393A0A0B4J1F6 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
BC053393A0A0B4J1F6 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
BC053393A0A0B4J1F6 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BC053393A0A0B4J1F6 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BC053393A0A0B4J1F6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
BC053393A0A0B4J1F6 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
BC053393A0A0B4J1F6 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
BC053393A0A0B4J1F6 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC18.37■□□□□ 0.53
BC053393A0A0B4J1F6 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.37■□□□□ 0.53
BC053393A0A0B4J1F6 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
BC053393A0A0B4J1F6 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
BC053393A0A0B4J1F6 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BC053393A0A0B4J1F6 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BC053393A0A0B4J1F6 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BC053393A0A0B4J1F6 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BC053393A0A0B4J1F6 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
BC053393A0A0B4J1F6 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BC053393A0A0B4J1F6 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
BC053393A0A0B4J1F6 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
BC053393A0A0B4J1F6 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BC053393A0A0B4J1F6 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BC053393A0A0B4J1F6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
BC053393A0A0B4J1F6 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BC053393A0A0B4J1F6 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
BC053393A0A0B4J1F6 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
BC053393A0A0B4J1F6 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BC053393A0A0B4J1F6 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
BC053393A0A0B4J1F6 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
BC053393A0A0B4J1F6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BC053393A0A0B4J1F6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BC053393A0A0B4J1F6 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
BC053393A0A0B4J1F6 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
BC053393A0A0B4J1F6 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BC053393A0A0B4J1F6 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BC053393A0A0B4J1F6 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
BC053393A0A0B4J1F6 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BC053393A0A0B4J1F6 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BC053393A0A0B4J1F6 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.32■□□□□ 0.52
BC053393A0A0B4J1F6 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
BC053393A0A0B4J1F6 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BC053393A0A0B4J1F6 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
BC053393A0A0B4J1F6 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.32■□□□□ 0.52
BC053393A0A0B4J1F6 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BC053393A0A0B4J1F6 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.31■□□□□ 0.52
BC053393A0A0B4J1F6 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BC053393A0A0B4J1F6 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BC053393A0A0B4J1F6 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BC053393A0A0B4J1F6 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
BC053393A0A0B4J1F6 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BC053393A0A0B4J1F6 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BC053393A0A0B4J1F6 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms