Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ighv1-43A0A0A6YXN5 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ighv1-43A0A0A6YXN5 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.69■■□□□ 1.06
Ighv1-43A0A0A6YXN5 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ighv1-43A0A0A6YXN5 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.68■■□□□ 1.06
Ighv1-43A0A0A6YXN5 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ighv1-43A0A0A6YXN5 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ighv1-43A0A0A6YXN5 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ighv1-43A0A0A6YXN5 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Ighv1-43A0A0A6YXN5 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ighv1-43A0A0A6YXN5 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.68■■□□□ 1.06
Ighv1-43A0A0A6YXN5 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.67■■□□□ 1.06
Ighv1-43A0A0A6YXN5 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ighv1-43A0A0A6YXN5 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ighv1-43A0A0A6YXN5 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ighv1-43A0A0A6YXN5 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ighv1-43A0A0A6YXN5 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ighv1-43A0A0A6YXN5 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.65■■□□□ 1.06
Ighv1-43A0A0A6YXN5 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ighv1-43A0A0A6YXN5 Scarna2-201ENSMUST00000157560 414 ntBASIC21.65■■□□□ 1.06
Ighv1-43A0A0A6YXN5 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.64■■□□□ 1.05
Ighv1-43A0A0A6YXN5 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Ighv1-43A0A0A6YXN5 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ighv1-43A0A0A6YXN5 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ighv1-43A0A0A6YXN5 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Ighv1-43A0A0A6YXN5 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ighv1-43A0A0A6YXN5 Gm9806-201ENSMUST00000051080 552 ntBASIC21.63■■□□□ 1.05
Ighv1-43A0A0A6YXN5 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Ighv1-43A0A0A6YXN5 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ighv1-43A0A0A6YXN5 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.61■■□□□ 1.05
Ighv1-43A0A0A6YXN5 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ighv1-43A0A0A6YXN5 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ighv1-43A0A0A6YXN5 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ighv1-43A0A0A6YXN5 Gm11687-201ENSMUST00000118911 886 ntBASIC21.6■■□□□ 1.05
Ighv1-43A0A0A6YXN5 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ighv1-43A0A0A6YXN5 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ighv1-43A0A0A6YXN5 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Ighv1-43A0A0A6YXN5 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ighv1-43A0A0A6YXN5 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.59■■□□□ 1.05
Ighv1-43A0A0A6YXN5 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ighv1-43A0A0A6YXN5 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Ighv1-43A0A0A6YXN5 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ighv1-43A0A0A6YXN5 Gm9812-201ENSMUST00000061934 968 ntBASIC21.58■■□□□ 1.05
Ighv1-43A0A0A6YXN5 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.58■■□□□ 1.04
Ighv1-43A0A0A6YXN5 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ighv1-43A0A0A6YXN5 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ighv1-43A0A0A6YXN5 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ighv1-43A0A0A6YXN5 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.57■■□□□ 1.04
Ighv1-43A0A0A6YXN5 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ighv1-43A0A0A6YXN5 Gm16437-201ENSMUST00000025669 507 ntBASIC21.56■■□□□ 1.04
Ighv1-43A0A0A6YXN5 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ighv1-43A0A0A6YXN5 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
Ighv1-43A0A0A6YXN5 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ighv1-43A0A0A6YXN5 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.54■■□□□ 1.04
Ighv1-43A0A0A6YXN5 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ighv1-43A0A0A6YXN5 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ighv1-43A0A0A6YXN5 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.53■■□□□ 1.04
Ighv1-43A0A0A6YXN5 Cap2-205ENSMUST00000225824 1634 ntBASIC21.53■■□□□ 1.04
Ighv1-43A0A0A6YXN5 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ighv1-43A0A0A6YXN5 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.52■■□□□ 1.04
Ighv1-43A0A0A6YXN5 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ighv1-43A0A0A6YXN5 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.51■■□□□ 1.03
Ighv1-43A0A0A6YXN5 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ighv1-43A0A0A6YXN5 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ighv1-43A0A0A6YXN5 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ighv1-43A0A0A6YXN5 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ighv1-43A0A0A6YXN5 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ighv1-43A0A0A6YXN5 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.49■■□□□ 1.03
Ighv1-43A0A0A6YXN5 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.49■■□□□ 1.03
Ighv1-43A0A0A6YXN5 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ighv1-43A0A0A6YXN5 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ighv1-43A0A0A6YXN5 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ighv1-43A0A0A6YXN5 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ighv1-43A0A0A6YXN5 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ighv1-43A0A0A6YXN5 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.48■■□□□ 1.03
Ighv1-43A0A0A6YXN5 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ighv1-43A0A0A6YXN5 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Ighv1-43A0A0A6YXN5 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ighv1-43A0A0A6YXN5 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ighv1-43A0A0A6YXN5 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ighv1-43A0A0A6YXN5 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ighv1-43A0A0A6YXN5 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Ighv1-43A0A0A6YXN5 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ighv1-43A0A0A6YXN5 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.45■■□□□ 1.02
Ighv1-43A0A0A6YXN5 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ighv1-43A0A0A6YXN5 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.45■■□□□ 1.02
Ighv1-43A0A0A6YXN5 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ighv1-43A0A0A6YXN5 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ighv1-43A0A0A6YXN5 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.45■■□□□ 1.02
Ighv1-43A0A0A6YXN5 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ighv1-43A0A0A6YXN5 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ighv1-43A0A0A6YXN5 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.44■■□□□ 1.02
Ighv1-43A0A0A6YXN5 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.44■■□□□ 1.02
Ighv1-43A0A0A6YXN5 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ighv1-43A0A0A6YXN5 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ighv1-43A0A0A6YXN5 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ighv1-43A0A0A6YXN5 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ighv1-43A0A0A6YXN5 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ighv1-43A0A0A6YXN5 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
Ighv1-43A0A0A6YXN5 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms