Protein–RNA interactions for Protein: A0A0A6YXG2

Ighv1-56, Immunoglobulin heavy variable 1-56 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-56A0A0A6YXG2 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ighv1-56A0A0A6YXG2 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ighv1-56A0A0A6YXG2 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
Ighv1-56A0A0A6YXG2 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Ighv1-56A0A0A6YXG2 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Ighv1-56A0A0A6YXG2 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Ighv1-56A0A0A6YXG2 Gm30023-201ENSMUST00000197970 889 ntBASIC15.53■□□□□ 0.08
Ighv1-56A0A0A6YXG2 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv1-56A0A0A6YXG2 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv1-56A0A0A6YXG2 Gm17641-201ENSMUST00000166328 2350 ntBASIC15.53■□□□□ 0.08
Ighv1-56A0A0A6YXG2 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ighv1-56A0A0A6YXG2 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ighv1-56A0A0A6YXG2 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ighv1-56A0A0A6YXG2 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-56A0A0A6YXG2 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-56A0A0A6YXG2 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Ighv1-56A0A0A6YXG2 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-56A0A0A6YXG2 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-56A0A0A6YXG2 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-56A0A0A6YXG2 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-56A0A0A6YXG2 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-56A0A0A6YXG2 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-56A0A0A6YXG2 Gm45855-201ENSMUST00000212546 880 ntBASIC15.5■□□□□ 0.07
Ighv1-56A0A0A6YXG2 Gm37847-201ENSMUST00000192163 1497 ntBASIC15.5■□□□□ 0.07
Ighv1-56A0A0A6YXG2 Gm31748-201ENSMUST00000194938 1497 ntBASIC15.5■□□□□ 0.07
Ighv1-56A0A0A6YXG2 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-56A0A0A6YXG2 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-56A0A0A6YXG2 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-56A0A0A6YXG2 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-56A0A0A6YXG2 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Ighv1-56A0A0A6YXG2 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Ighv1-56A0A0A6YXG2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-56A0A0A6YXG2 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
Ighv1-56A0A0A6YXG2 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-56A0A0A6YXG2 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-56A0A0A6YXG2 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-56A0A0A6YXG2 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-56A0A0A6YXG2 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-56A0A0A6YXG2 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Ighv1-56A0A0A6YXG2 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Ighv1-56A0A0A6YXG2 Particl-201ENSMUST00000205370 1560 ntBASIC15.48■□□□□ 0.07
Ighv1-56A0A0A6YXG2 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv1-56A0A0A6YXG2 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv1-56A0A0A6YXG2 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv1-56A0A0A6YXG2 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv1-56A0A0A6YXG2 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv1-56A0A0A6YXG2 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Ighv1-56A0A0A6YXG2 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv1-56A0A0A6YXG2 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Ighv1-56A0A0A6YXG2 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Ighv1-56A0A0A6YXG2 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv1-56A0A0A6YXG2 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv1-56A0A0A6YXG2 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv1-56A0A0A6YXG2 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv1-56A0A0A6YXG2 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv1-56A0A0A6YXG2 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-56A0A0A6YXG2 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
Ighv1-56A0A0A6YXG2 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-56A0A0A6YXG2 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-56A0A0A6YXG2 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-56A0A0A6YXG2 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
Ighv1-56A0A0A6YXG2 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ighv1-56A0A0A6YXG2 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ighv1-56A0A0A6YXG2 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ighv1-56A0A0A6YXG2 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Ighv1-56A0A0A6YXG2 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Ighv1-56A0A0A6YXG2 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Ighv1-56A0A0A6YXG2 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC15.43■□□□□ 0.06
Ighv1-56A0A0A6YXG2 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ighv1-56A0A0A6YXG2 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ighv1-56A0A0A6YXG2 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ighv1-56A0A0A6YXG2 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ighv1-56A0A0A6YXG2 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ighv1-56A0A0A6YXG2 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ighv1-56A0A0A6YXG2 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ighv1-56A0A0A6YXG2 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ighv1-56A0A0A6YXG2 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ighv1-56A0A0A6YXG2 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ighv1-56A0A0A6YXG2 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
Ighv1-56A0A0A6YXG2 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ighv1-56A0A0A6YXG2 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC15.42■□□□□ 0.06
Ighv1-56A0A0A6YXG2 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC15.41■□□□□ 0.06
Ighv1-56A0A0A6YXG2 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Ighv1-56A0A0A6YXG2 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ighv1-56A0A0A6YXG2 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC15.41■□□□□ 0.06
Ighv1-56A0A0A6YXG2 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC15.41■□□□□ 0.06
Ighv1-56A0A0A6YXG2 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ighv1-56A0A0A6YXG2 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ighv1-56A0A0A6YXG2 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ighv1-56A0A0A6YXG2 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ighv1-56A0A0A6YXG2 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ighv1-56A0A0A6YXG2 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-56A0A0A6YXG2 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-56A0A0A6YXG2 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-56A0A0A6YXG2 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-56A0A0A6YXG2 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC15.39■□□□□ 0.05
Ighv1-56A0A0A6YXG2 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-56A0A0A6YXG2 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-56A0A0A6YXG2 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC15.38■□□□□ 0.05
Ighv1-56A0A0A6YXG2 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms