Protein–RNA interactions for Protein: A0A0A6YXF1

Ighv3-4, Immunoglobulin heavy variable V3-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-4A0A0A6YXF1 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.62■□□□□ 0.73
Ighv3-4A0A0A6YXF1 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Ighv3-4A0A0A6YXF1 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.61■□□□□ 0.73
Ighv3-4A0A0A6YXF1 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ighv3-4A0A0A6YXF1 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Ighv3-4A0A0A6YXF1 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Ighv3-4A0A0A6YXF1 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ighv3-4A0A0A6YXF1 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Ighv3-4A0A0A6YXF1 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ighv3-4A0A0A6YXF1 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ighv3-4A0A0A6YXF1 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ighv3-4A0A0A6YXF1 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Ighv3-4A0A0A6YXF1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ighv3-4A0A0A6YXF1 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ighv3-4A0A0A6YXF1 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ighv3-4A0A0A6YXF1 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ighv3-4A0A0A6YXF1 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ighv3-4A0A0A6YXF1 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.57■□□□□ 0.72
Ighv3-4A0A0A6YXF1 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ighv3-4A0A0A6YXF1 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
Ighv3-4A0A0A6YXF1 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Ighv3-4A0A0A6YXF1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ighv3-4A0A0A6YXF1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Ighv3-4A0A0A6YXF1 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Ighv3-4A0A0A6YXF1 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ighv3-4A0A0A6YXF1 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ighv3-4A0A0A6YXF1 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ighv3-4A0A0A6YXF1 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ighv3-4A0A0A6YXF1 Zxda-201ENSMUST00000117281 2621 ntBASIC19.54■□□□□ 0.72
Ighv3-4A0A0A6YXF1 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.54■□□□□ 0.72
Ighv3-4A0A0A6YXF1 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ighv3-4A0A0A6YXF1 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.53■□□□□ 0.72
Ighv3-4A0A0A6YXF1 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ighv3-4A0A0A6YXF1 Gm14523-201ENSMUST00000117260 558 ntBASIC19.53■□□□□ 0.72
Ighv3-4A0A0A6YXF1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ighv3-4A0A0A6YXF1 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ighv3-4A0A0A6YXF1 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ighv3-4A0A0A6YXF1 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ighv3-4A0A0A6YXF1 Gm9812-201ENSMUST00000061934 968 ntBASIC19.52■□□□□ 0.72
Ighv3-4A0A0A6YXF1 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
Ighv3-4A0A0A6YXF1 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ighv3-4A0A0A6YXF1 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ighv3-4A0A0A6YXF1 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ighv3-4A0A0A6YXF1 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ighv3-4A0A0A6YXF1 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ighv3-4A0A0A6YXF1 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.51■□□□□ 0.71
Ighv3-4A0A0A6YXF1 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ighv3-4A0A0A6YXF1 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Ighv3-4A0A0A6YXF1 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ighv3-4A0A0A6YXF1 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ighv3-4A0A0A6YXF1 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.5■□□□□ 0.71
Ighv3-4A0A0A6YXF1 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ighv3-4A0A0A6YXF1 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ighv3-4A0A0A6YXF1 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ighv3-4A0A0A6YXF1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ighv3-4A0A0A6YXF1 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.49■□□□□ 0.71
Ighv3-4A0A0A6YXF1 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.49■□□□□ 0.71
Ighv3-4A0A0A6YXF1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ighv3-4A0A0A6YXF1 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.49■□□□□ 0.71
Ighv3-4A0A0A6YXF1 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ighv3-4A0A0A6YXF1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Ighv3-4A0A0A6YXF1 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Ighv3-4A0A0A6YXF1 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Ighv3-4A0A0A6YXF1 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ighv3-4A0A0A6YXF1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ighv3-4A0A0A6YXF1 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.46■□□□□ 0.71
Ighv3-4A0A0A6YXF1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.46■□□□□ 0.71
Ighv3-4A0A0A6YXF1 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ighv3-4A0A0A6YXF1 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ighv3-4A0A0A6YXF1 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ighv3-4A0A0A6YXF1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.45■□□□□ 0.7
Ighv3-4A0A0A6YXF1 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.44■□□□□ 0.7
Ighv3-4A0A0A6YXF1 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ighv3-4A0A0A6YXF1 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ighv3-4A0A0A6YXF1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ighv3-4A0A0A6YXF1 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ighv3-4A0A0A6YXF1 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.42■□□□□ 0.7
Ighv3-4A0A0A6YXF1 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ighv3-4A0A0A6YXF1 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ighv3-4A0A0A6YXF1 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ighv3-4A0A0A6YXF1 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Ighv3-4A0A0A6YXF1 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.4■□□□□ 0.7
Ighv3-4A0A0A6YXF1 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ighv3-4A0A0A6YXF1 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ighv3-4A0A0A6YXF1 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ighv3-4A0A0A6YXF1 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ighv3-4A0A0A6YXF1 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.39■□□□□ 0.69
Ighv3-4A0A0A6YXF1 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ighv3-4A0A0A6YXF1 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.38■□□□□ 0.69
Ighv3-4A0A0A6YXF1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.38■□□□□ 0.69
Ighv3-4A0A0A6YXF1 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ighv3-4A0A0A6YXF1 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.37■□□□□ 0.69
Ighv3-4A0A0A6YXF1 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ighv3-4A0A0A6YXF1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ighv3-4A0A0A6YXF1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ighv3-4A0A0A6YXF1 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ighv3-4A0A0A6YXF1 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ighv3-4A0A0A6YXF1 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ighv3-4A0A0A6YXF1 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ighv3-4A0A0A6YXF1 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms