Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav6-5A0A075B6B5 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.04■□□□□ 0.48
Trav6-5A0A075B6B5 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav6-5A0A075B6B5 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav6-5A0A075B6B5 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav6-5A0A075B6B5 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav6-5A0A075B6B5 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav6-5A0A075B6B5 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav6-5A0A075B6B5 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav6-5A0A075B6B5 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trav6-5A0A075B6B5 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Trav6-5A0A075B6B5 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trav6-5A0A075B6B5 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trav6-5A0A075B6B5 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.01■□□□□ 0.47
Trav6-5A0A075B6B5 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav6-5A0A075B6B5 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav6-5A0A075B6B5 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav6-5A0A075B6B5 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav6-5A0A075B6B5 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav6-5A0A075B6B5 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav6-5A0A075B6B5 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav6-5A0A075B6B5 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav6-5A0A075B6B5 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav6-5A0A075B6B5 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.98■□□□□ 0.47
Trav6-5A0A075B6B5 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC17.98■□□□□ 0.47
Trav6-5A0A075B6B5 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6-5A0A075B6B5 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
Trav6-5A0A075B6B5 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6-5A0A075B6B5 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6-5A0A075B6B5 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trav6-5A0A075B6B5 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav6-5A0A075B6B5 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Trav6-5A0A075B6B5 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav6-5A0A075B6B5 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav6-5A0A075B6B5 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
Trav6-5A0A075B6B5 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav6-5A0A075B6B5 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav6-5A0A075B6B5 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav6-5A0A075B6B5 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav6-5A0A075B6B5 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav6-5A0A075B6B5 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav6-5A0A075B6B5 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trav6-5A0A075B6B5 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trav6-5A0A075B6B5 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trav6-5A0A075B6B5 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav6-5A0A075B6B5 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav6-5A0A075B6B5 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav6-5A0A075B6B5 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trav6-5A0A075B6B5 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.94■□□□□ 0.46
Trav6-5A0A075B6B5 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6-5A0A075B6B5 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.94■□□□□ 0.46
Trav6-5A0A075B6B5 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6-5A0A075B6B5 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6-5A0A075B6B5 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6-5A0A075B6B5 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6-5A0A075B6B5 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6-5A0A075B6B5 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav6-5A0A075B6B5 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav6-5A0A075B6B5 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Trav6-5A0A075B6B5 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav6-5A0A075B6B5 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav6-5A0A075B6B5 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav6-5A0A075B6B5 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav6-5A0A075B6B5 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
Trav6-5A0A075B6B5 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6-5A0A075B6B5 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6-5A0A075B6B5 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6-5A0A075B6B5 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6-5A0A075B6B5 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav6-5A0A075B6B5 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav6-5A0A075B6B5 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.9■□□□□ 0.46
Trav6-5A0A075B6B5 Gm26115-201ENSMUST00000175605 87 ntBASIC17.9■□□□□ 0.46
Trav6-5A0A075B6B5 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Trav6-5A0A075B6B5 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav6-5A0A075B6B5 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav6-5A0A075B6B5 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav6-5A0A075B6B5 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.9■□□□□ 0.46
Trav6-5A0A075B6B5 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trav6-5A0A075B6B5 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Trav6-5A0A075B6B5 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Trav6-5A0A075B6B5 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trav6-5A0A075B6B5 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
Trav6-5A0A075B6B5 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav6-5A0A075B6B5 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Trav6-5A0A075B6B5 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav6-5A0A075B6B5 Particl-201ENSMUST00000205370 1560 ntBASIC17.87■□□□□ 0.45
Trav6-5A0A075B6B5 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Trav6-5A0A075B6B5 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav6-5A0A075B6B5 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Trav6-5A0A075B6B5 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav6-5A0A075B6B5 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC17.87■□□□□ 0.45
Trav6-5A0A075B6B5 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav6-5A0A075B6B5 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav6-5A0A075B6B5 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav6-5A0A075B6B5 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav6-5A0A075B6B5 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav6-5A0A075B6B5 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav6-5A0A075B6B5 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trav6-5A0A075B6B5 Gm37847-201ENSMUST00000192163 1497 ntBASIC17.85■□□□□ 0.45
Trav6-5A0A075B6B5 Gm31748-201ENSMUST00000194938 1497 ntBASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms