Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Trav12d-3A0A075B6A4 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav12d-3A0A075B6A4 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Trav12d-3A0A075B6A4 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav12d-3A0A075B6A4 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav12d-3A0A075B6A4 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trav12d-3A0A075B6A4 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.48■□□□□ 0.39
Trav12d-3A0A075B6A4 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav12d-3A0A075B6A4 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC17.48■□□□□ 0.39
Trav12d-3A0A075B6A4 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav12d-3A0A075B6A4 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav12d-3A0A075B6A4 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav12d-3A0A075B6A4 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Trav12d-3A0A075B6A4 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav12d-3A0A075B6A4 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trav12d-3A0A075B6A4 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav12d-3A0A075B6A4 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav12d-3A0A075B6A4 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav12d-3A0A075B6A4 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav12d-3A0A075B6A4 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav12d-3A0A075B6A4 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav12d-3A0A075B6A4 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
Trav12d-3A0A075B6A4 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Trav12d-3A0A075B6A4 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav12d-3A0A075B6A4 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav12d-3A0A075B6A4 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav12d-3A0A075B6A4 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Trav12d-3A0A075B6A4 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav12d-3A0A075B6A4 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav12d-3A0A075B6A4 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC17.45■□□□□ 0.38
Trav12d-3A0A075B6A4 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.44■□□□□ 0.38
Trav12d-3A0A075B6A4 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav12d-3A0A075B6A4 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav12d-3A0A075B6A4 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trav12d-3A0A075B6A4 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trav12d-3A0A075B6A4 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav12d-3A0A075B6A4 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav12d-3A0A075B6A4 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav12d-3A0A075B6A4 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav12d-3A0A075B6A4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Trav12d-3A0A075B6A4 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav12d-3A0A075B6A4 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav12d-3A0A075B6A4 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Trav12d-3A0A075B6A4 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Trav12d-3A0A075B6A4 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Trav12d-3A0A075B6A4 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.41■□□□□ 0.38
Trav12d-3A0A075B6A4 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav12d-3A0A075B6A4 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav12d-3A0A075B6A4 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav12d-3A0A075B6A4 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trav12d-3A0A075B6A4 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav12d-3A0A075B6A4 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav12d-3A0A075B6A4 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav12d-3A0A075B6A4 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav12d-3A0A075B6A4 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav12d-3A0A075B6A4 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav12d-3A0A075B6A4 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav12d-3A0A075B6A4 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav12d-3A0A075B6A4 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav12d-3A0A075B6A4 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav12d-3A0A075B6A4 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav12d-3A0A075B6A4 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Trav12d-3A0A075B6A4 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav12d-3A0A075B6A4 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.38■□□□□ 0.37
Trav12d-3A0A075B6A4 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav12d-3A0A075B6A4 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav12d-3A0A075B6A4 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav12d-3A0A075B6A4 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav12d-3A0A075B6A4 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav12d-3A0A075B6A4 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav12d-3A0A075B6A4 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC17.36■□□□□ 0.37
Trav12d-3A0A075B6A4 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Trav12d-3A0A075B6A4 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav12d-3A0A075B6A4 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav12d-3A0A075B6A4 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav12d-3A0A075B6A4 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav12d-3A0A075B6A4 AC166822.3-201ENSMUST00000227394 661 ntBASIC17.35■□□□□ 0.37
Trav12d-3A0A075B6A4 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav12d-3A0A075B6A4 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav12d-3A0A075B6A4 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav12d-3A0A075B6A4 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
Trav12d-3A0A075B6A4 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav12d-3A0A075B6A4 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Trav12d-3A0A075B6A4 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trav12d-3A0A075B6A4 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav12d-3A0A075B6A4 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Trav12d-3A0A075B6A4 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav12d-3A0A075B6A4 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav12d-3A0A075B6A4 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC17.32■□□□□ 0.36
Trav12d-3A0A075B6A4 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Trav12d-3A0A075B6A4 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav12d-3A0A075B6A4 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav12d-3A0A075B6A4 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav12d-3A0A075B6A4 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
Trav12d-3A0A075B6A4 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav12d-3A0A075B6A4 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav12d-3A0A075B6A4 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav12d-3A0A075B6A4 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav12d-3A0A075B6A4 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.31■□□□□ 0.36
Trav12d-3A0A075B6A4 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms