Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19,24■□□□□ 0,67
Trav5-4A0A075B652 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19,24■□□□□ 0,67
Trav5-4A0A075B652 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19,23■□□□□ 0,67
Trav5-4A0A075B652 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19,23■□□□□ 0,67
Trav5-4A0A075B652 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19,23■□□□□ 0,67
Trav5-4A0A075B652 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19,23■□□□□ 0,67
Trav5-4A0A075B652 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19,22■□□□□ 0,67
Trav5-4A0A075B652 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19,22■□□□□ 0,67
Trav5-4A0A075B652 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19,22■□□□□ 0,67
Trav5-4A0A075B652 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19,21■□□□□ 0,67
Trav5-4A0A075B652 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19,21■□□□□ 0,67
Trav5-4A0A075B652 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19,21■□□□□ 0,67
Trav5-4A0A075B652 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19,2■□□□□ 0,66
Trav5-4A0A075B652 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19,2■□□□□ 0,66
Trav5-4A0A075B652 Gm37847-201ENSMUST00000192163 1497 ntBASIC19,2■□□□□ 0,66
Trav5-4A0A075B652 Gm31748-201ENSMUST00000194938 1497 ntBASIC19,2■□□□□ 0,66
Trav5-4A0A075B652 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19,2■□□□□ 0,66
Trav5-4A0A075B652 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19,19■□□□□ 0,66
Trav5-4A0A075B652 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19,19■□□□□ 0,66
Trav5-4A0A075B652 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19,19■□□□□ 0,66
Trav5-4A0A075B652 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19,18■□□□□ 0,66
Trav5-4A0A075B652 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19,18■□□□□ 0,66
Trav5-4A0A075B652 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19,18■□□□□ 0,66
Trav5-4A0A075B652 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19,18■□□□□ 0,66
Trav5-4A0A075B652 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19,17■□□□□ 0,66
Trav5-4A0A075B652 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19,17■□□□□ 0,66
Trav5-4A0A075B652 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19,16■□□□□ 0,66
Trav5-4A0A075B652 Nkain2-201ENSMUST00000092602 558 ntBASIC19,16■□□□□ 0,66
Trav5-4A0A075B652 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19,16■□□□□ 0,66
Trav5-4A0A075B652 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19,16■□□□□ 0,66
Trav5-4A0A075B652 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19,16■□□□□ 0,66
Trav5-4A0A075B652 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19,15■□□□□ 0,66
Trav5-4A0A075B652 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19,15■□□□□ 0,66
Trav5-4A0A075B652 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19,15■□□□□ 0,66
Trav5-4A0A075B652 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19,15■□□□□ 0,66
Trav5-4A0A075B652 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19,15■□□□□ 0,66
Trav5-4A0A075B652 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19,14■□□□□ 0,66
Trav5-4A0A075B652 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19,14■□□□□ 0,65
Trav5-4A0A075B652 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19,14■□□□□ 0,65
Trav5-4A0A075B652 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19,14■□□□□ 0,65
Trav5-4A0A075B652 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19,13■□□□□ 0,65
Trav5-4A0A075B652 Particl-201ENSMUST00000205370 1560 ntBASIC19,13■□□□□ 0,65
Trav5-4A0A075B652 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19,13■□□□□ 0,65
Trav5-4A0A075B652 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19,13■□□□□ 0,65
Trav5-4A0A075B652 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19,12■□□□□ 0,65
Trav5-4A0A075B652 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19,12■□□□□ 0,65
Trav5-4A0A075B652 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19,11■□□□□ 0,65
Trav5-4A0A075B652 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19,11■□□□□ 0,65
Trav5-4A0A075B652 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19,11■□□□□ 0,65
Trav5-4A0A075B652 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19,11■□□□□ 0,65
Trav5-4A0A075B652 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19,1■□□□□ 0,65
Trav5-4A0A075B652 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19,1■□□□□ 0,65
Trav5-4A0A075B652 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19,1■□□□□ 0,65
Trav5-4A0A075B652 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19,1■□□□□ 0,65
Trav5-4A0A075B652 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19,09■□□□□ 0,65
Trav5-4A0A075B652 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19,09■□□□□ 0,65
Trav5-4A0A075B652 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19,09■□□□□ 0,65
Trav5-4A0A075B652 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19,09■□□□□ 0,65
Trav5-4A0A075B652 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19,09■□□□□ 0,65
Trav5-4A0A075B652 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19,09■□□□□ 0,65
Trav5-4A0A075B652 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19,09■□□□□ 0,65
Trav5-4A0A075B652 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19,08■□□□□ 0,65
Trav5-4A0A075B652 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19,08■□□□□ 0,65
Trav5-4A0A075B652 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19,08■□□□□ 0,65
Trav5-4A0A075B652 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19,08■□□□□ 0,65
Trav5-4A0A075B652 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19,08■□□□□ 0,64
Trav5-4A0A075B652 Gm42809-201ENSMUST00000198429 1138 ntBASIC19,08■□□□□ 0,64
Trav5-4A0A075B652 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19,08■□□□□ 0,64
Trav5-4A0A075B652 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19,08■□□□□ 0,64
Trav5-4A0A075B652 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19,08■□□□□ 0,64
Trav5-4A0A075B652 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19,07■□□□□ 0,64
Trav5-4A0A075B652 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19,07■□□□□ 0,64
Trav5-4A0A075B652 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19,07■□□□□ 0,64
Trav5-4A0A075B652 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19,06■□□□□ 0,64
Trav5-4A0A075B652 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19,06■□□□□ 0,64
Trav5-4A0A075B652 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19,06■□□□□ 0,64
Trav5-4A0A075B652 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19,06■□□□□ 0,64
Trav5-4A0A075B652 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19,06■□□□□ 0,64
Trav5-4A0A075B652 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19,05■□□□□ 0,64
Trav5-4A0A075B652 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19,04■□□□□ 0,64
Trav5-4A0A075B652 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19,04■□□□□ 0,64
Trav5-4A0A075B652 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19,04■□□□□ 0,64
Trav5-4A0A075B652 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19,04■□□□□ 0,64
Trav5-4A0A075B652 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19,03■□□□□ 0,64
Trav5-4A0A075B652 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19,03■□□□□ 0,64
Trav5-4A0A075B652 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19,03■□□□□ 0,64
Trav5-4A0A075B652 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19,02■□□□□ 0,64
Trav5-4A0A075B652 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19,02■□□□□ 0,64
Trav5-4A0A075B652 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19,02■□□□□ 0,64
Trav5-4A0A075B652 Gm9939-201ENSMUST00000067161 1154 ntBASIC19,02■□□□□ 0,64
Trav5-4A0A075B652 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19,02■□□□□ 0,64
Trav5-4A0A075B652 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19,02■□□□□ 0,64
Trav5-4A0A075B652 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19,02■□□□□ 0,64
Trav5-4A0A075B652 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19,02■□□□□ 0,63
Trav5-4A0A075B652 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19,02■□□□□ 0,63
Trav5-4A0A075B652 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19,02■□□□□ 0,63
Trav5-4A0A075B652 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19,02■□□□□ 0,63
Trav5-4A0A075B652 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19,01■□□□□ 0,63
Trav5-4A0A075B652 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19,01■□□□□ 0,63
Trav5-4A0A075B652 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19,01■□□□□ 0,63
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms