Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav15d-1-dv6d-1A0A075B624 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
Trav15d-1-dv6d-1A0A075B624 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trav15d-1-dv6d-1A0A075B624 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Trav15d-1-dv6d-1A0A075B624 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav15d-1-dv6d-1A0A075B624 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav15d-1-dv6d-1A0A075B624 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Trav15d-1-dv6d-1A0A075B624 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav15d-1-dv6d-1A0A075B624 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav15d-1-dv6d-1A0A075B624 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav15d-1-dv6d-1A0A075B624 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav15d-1-dv6d-1A0A075B624 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav15d-1-dv6d-1A0A075B624 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav15d-1-dv6d-1A0A075B624 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav15d-1-dv6d-1A0A075B624 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav15d-1-dv6d-1A0A075B624 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav15d-1-dv6d-1A0A075B624 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav15d-1-dv6d-1A0A075B624 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav15d-1-dv6d-1A0A075B624 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav15d-1-dv6d-1A0A075B624 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.69■□□□□ 0.74
Trav15d-1-dv6d-1A0A075B624 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.69■□□□□ 0.74
Trav15d-1-dv6d-1A0A075B624 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav15d-1-dv6d-1A0A075B624 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Trav15d-1-dv6d-1A0A075B624 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav15d-1-dv6d-1A0A075B624 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trav15d-1-dv6d-1A0A075B624 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav15d-1-dv6d-1A0A075B624 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.66■□□□□ 0.74
Trav15d-1-dv6d-1A0A075B624 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav15d-1-dv6d-1A0A075B624 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.66■□□□□ 0.74
Trav15d-1-dv6d-1A0A075B624 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Trav15d-1-dv6d-1A0A075B624 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.66■□□□□ 0.74
Trav15d-1-dv6d-1A0A075B624 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav15d-1-dv6d-1A0A075B624 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav15d-1-dv6d-1A0A075B624 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav15d-1-dv6d-1A0A075B624 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Trav15d-1-dv6d-1A0A075B624 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.65■□□□□ 0.74
Trav15d-1-dv6d-1A0A075B624 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.65■□□□□ 0.74
Trav15d-1-dv6d-1A0A075B624 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav15d-1-dv6d-1A0A075B624 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav15d-1-dv6d-1A0A075B624 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Trav15d-1-dv6d-1A0A075B624 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.64■□□□□ 0.73
Trav15d-1-dv6d-1A0A075B624 Zfp131-205ENSMUST00000223812 663 ntBASIC19.64■□□□□ 0.73
Trav15d-1-dv6d-1A0A075B624 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trav15d-1-dv6d-1A0A075B624 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trav15d-1-dv6d-1A0A075B624 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Trav15d-1-dv6d-1A0A075B624 Particl-201ENSMUST00000205370 1560 ntBASIC19.63■□□□□ 0.73
Trav15d-1-dv6d-1A0A075B624 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trav15d-1-dv6d-1A0A075B624 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.62■□□□□ 0.73
Trav15d-1-dv6d-1A0A075B624 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Trav15d-1-dv6d-1A0A075B624 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav15d-1-dv6d-1A0A075B624 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav15d-1-dv6d-1A0A075B624 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav15d-1-dv6d-1A0A075B624 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
Trav15d-1-dv6d-1A0A075B624 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trav15d-1-dv6d-1A0A075B624 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Trav15d-1-dv6d-1A0A075B624 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Trav15d-1-dv6d-1A0A075B624 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.6■□□□□ 0.73
Trav15d-1-dv6d-1A0A075B624 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.6■□□□□ 0.73
Trav15d-1-dv6d-1A0A075B624 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trav15d-1-dv6d-1A0A075B624 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav15d-1-dv6d-1A0A075B624 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Trav15d-1-dv6d-1A0A075B624 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav15d-1-dv6d-1A0A075B624 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19.58■□□□□ 0.72
Trav15d-1-dv6d-1A0A075B624 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Trav15d-1-dv6d-1A0A075B624 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trav15d-1-dv6d-1A0A075B624 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav15d-1-dv6d-1A0A075B624 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav15d-1-dv6d-1A0A075B624 Gm24970-201ENSMUST00000175582 82 ntBASIC19.57■□□□□ 0.72
Trav15d-1-dv6d-1A0A075B624 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Trav15d-1-dv6d-1A0A075B624 Gm30023-201ENSMUST00000197970 889 ntBASIC19.56■□□□□ 0.72
Trav15d-1-dv6d-1A0A075B624 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav15d-1-dv6d-1A0A075B624 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav15d-1-dv6d-1A0A075B624 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav15d-1-dv6d-1A0A075B624 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav15d-1-dv6d-1A0A075B624 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav15d-1-dv6d-1A0A075B624 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav15d-1-dv6d-1A0A075B624 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav15d-1-dv6d-1A0A075B624 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.53■□□□□ 0.72
Trav15d-1-dv6d-1A0A075B624 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Trav15d-1-dv6d-1A0A075B624 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.53■□□□□ 0.72
Trav15d-1-dv6d-1A0A075B624 Gm9397-201ENSMUST00000200125 605 ntBASIC19.53■□□□□ 0.72
Trav15d-1-dv6d-1A0A075B624 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trav15d-1-dv6d-1A0A075B624 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.52■□□□□ 0.72
Trav15d-1-dv6d-1A0A075B624 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.52■□□□□ 0.72
Trav15d-1-dv6d-1A0A075B624 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trav15d-1-dv6d-1A0A075B624 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trav15d-1-dv6d-1A0A075B624 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Trav15d-1-dv6d-1A0A075B624 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Trav15d-1-dv6d-1A0A075B624 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
Trav15d-1-dv6d-1A0A075B624 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trav15d-1-dv6d-1A0A075B624 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav15d-1-dv6d-1A0A075B624 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav15d-1-dv6d-1A0A075B624 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Trav15d-1-dv6d-1A0A075B624 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav15d-1-dv6d-1A0A075B624 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav15d-1-dv6d-1A0A075B624 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trav15d-1-dv6d-1A0A075B624 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav15d-1-dv6d-1A0A075B624 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.5■□□□□ 0.71
Trav15d-1-dv6d-1A0A075B624 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav15d-1-dv6d-1A0A075B624 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms