Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.07■□□□□ 0.8
Trav5-1A0A075B5Z7 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trav5-1A0A075B5Z7 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.07■□□□□ 0.8
Trav5-1A0A075B5Z7 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trav5-1A0A075B5Z7 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Trav5-1A0A075B5Z7 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.05■□□□□ 0.8
Trav5-1A0A075B5Z7 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.04■□□□□ 0.8
Trav5-1A0A075B5Z7 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav5-1A0A075B5Z7 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.04■□□□□ 0.8
Trav5-1A0A075B5Z7 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav5-1A0A075B5Z7 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trav5-1A0A075B5Z7 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav5-1A0A075B5Z7 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trav5-1A0A075B5Z7 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trav5-1A0A075B5Z7 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Trav5-1A0A075B5Z7 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.01■□□□□ 0.79
Trav5-1A0A075B5Z7 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.01■□□□□ 0.79
Trav5-1A0A075B5Z7 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trav5-1A0A075B5Z7 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trav5-1A0A075B5Z7 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trav5-1A0A075B5Z7 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20■□□□□ 0.79
Trav5-1A0A075B5Z7 Pkd1-207ENSMUST00000228550 1050 ntBASIC20■□□□□ 0.79
Trav5-1A0A075B5Z7 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trav5-1A0A075B5Z7 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trav5-1A0A075B5Z7 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trav5-1A0A075B5Z7 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trav5-1A0A075B5Z7 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trav5-1A0A075B5Z7 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.99■□□□□ 0.79
Trav5-1A0A075B5Z7 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trav5-1A0A075B5Z7 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav5-1A0A075B5Z7 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Trav5-1A0A075B5Z7 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trav5-1A0A075B5Z7 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trav5-1A0A075B5Z7 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trav5-1A0A075B5Z7 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trav5-1A0A075B5Z7 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav5-1A0A075B5Z7 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav5-1A0A075B5Z7 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav5-1A0A075B5Z7 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav5-1A0A075B5Z7 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.96■□□□□ 0.79
Trav5-1A0A075B5Z7 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav5-1A0A075B5Z7 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trav5-1A0A075B5Z7 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.95■□□□□ 0.78
Trav5-1A0A075B5Z7 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trav5-1A0A075B5Z7 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trav5-1A0A075B5Z7 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.95■□□□□ 0.78
Trav5-1A0A075B5Z7 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trav5-1A0A075B5Z7 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trav5-1A0A075B5Z7 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trav5-1A0A075B5Z7 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trav5-1A0A075B5Z7 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trav5-1A0A075B5Z7 Mir6538-201ENSMUST00000183713 110 ntBASIC19.94■□□□□ 0.78
Trav5-1A0A075B5Z7 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trav5-1A0A075B5Z7 Gm45364-201ENSMUST00000210883 159 ntBASIC19.94■□□□□ 0.78
Trav5-1A0A075B5Z7 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav5-1A0A075B5Z7 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Trav5-1A0A075B5Z7 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trav5-1A0A075B5Z7 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trav5-1A0A075B5Z7 Gm9812-201ENSMUST00000061934 968 ntBASIC19.92■□□□□ 0.78
Trav5-1A0A075B5Z7 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav5-1A0A075B5Z7 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav5-1A0A075B5Z7 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav5-1A0A075B5Z7 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trav5-1A0A075B5Z7 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trav5-1A0A075B5Z7 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav5-1A0A075B5Z7 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Trav5-1A0A075B5Z7 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav5-1A0A075B5Z7 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Trav5-1A0A075B5Z7 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.9■□□□□ 0.78
Trav5-1A0A075B5Z7 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav5-1A0A075B5Z7 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trav5-1A0A075B5Z7 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
Trav5-1A0A075B5Z7 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trav5-1A0A075B5Z7 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav5-1A0A075B5Z7 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trav5-1A0A075B5Z7 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trav5-1A0A075B5Z7 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trav5-1A0A075B5Z7 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.88■□□□□ 0.77
Trav5-1A0A075B5Z7 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav5-1A0A075B5Z7 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.88■□□□□ 0.77
Trav5-1A0A075B5Z7 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.87■□□□□ 0.77
Trav5-1A0A075B5Z7 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav5-1A0A075B5Z7 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav5-1A0A075B5Z7 Gm9806-201ENSMUST00000051080 552 ntBASIC19.87■□□□□ 0.77
Trav5-1A0A075B5Z7 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav5-1A0A075B5Z7 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav5-1A0A075B5Z7 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.87■□□□□ 0.77
Trav5-1A0A075B5Z7 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav5-1A0A075B5Z7 Gm11687-201ENSMUST00000118911 886 ntBASIC19.86■□□□□ 0.77
Trav5-1A0A075B5Z7 Scarna2-201ENSMUST00000157560 414 ntBASIC19.86■□□□□ 0.77
Trav5-1A0A075B5Z7 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.86■□□□□ 0.77
Trav5-1A0A075B5Z7 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav5-1A0A075B5Z7 Gm11175-201ENSMUST00000116172 543 ntBASIC19.85■□□□□ 0.77
Trav5-1A0A075B5Z7 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trav5-1A0A075B5Z7 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav5-1A0A075B5Z7 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Trav5-1A0A075B5Z7 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav5-1A0A075B5Z7 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav5-1A0A075B5Z7 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.85■□□□□ 0.77
Trav5-1A0A075B5Z7 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms