Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 AC002546.1-201ENST00000588041 2504 ntBASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 OR5J1P-201ENST00000313544 939 ntBASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 U3.11-201ENST00000364476 212 ntBASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 RNU6-282P-201ENST00000365357 103 ntBASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 RNU6-76P-201ENST00000384060 104 ntBASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 RNU6-456P-201ENST00000384493 107 ntBASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 U8.11-201ENST00000384699 133 ntBASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 U8.12-201ENST00000384701 133 ntBASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 TXNP7-201ENST00000406296 293 ntBASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 SNORA3.3-201ENST00000408712 125 ntBASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 RNU4-55P-201ENST00000410731 137 ntBASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 PPP1R11P2-201ENST00000423543 382 ntBASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 DUTP6-201ENST00000425573 462 ntBASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 DPPA2P1-201ENST00000428060 556 ntBASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 C8orf59P1-201ENST00000429930 303 ntBASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 USP9YP28-201ENST00000435142 589 ntBASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 DNAJC19P4-201ENST00000440115 345 ntBASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 U8.18-201ENST00000459285 133 ntBASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 RPS23P3-201ENST00000470993 430 ntBASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 RPS26P15-201ENST00000488067 348 ntBASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 AC026726.1-201ENST00000512859 601 ntBASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 GMPSP1-201ENST00000514075 579 ntBASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 RNU2-10P-201ENST00000516375 211 ntBASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 RPL21P12-201ENST00000559810 515 ntBASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 MIR5685-201ENST00000579080 79 ntBASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 AC006130.2-201ENST00000586202 326 ntBASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 Z84480.1-201ENST00000605131 311 ntBASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 AL136363.1-201ENST00000605349 337 ntBASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 RNU1-30P-201ENST00000606575 163 ntBASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 AC233309.1-201ENST00000619522 751 ntBASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 AC091905.1-201ENST00000624400 311 ntBASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 MIR4275-201ENST00000636486 87 ntBASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CLDN16Q9Y5I7 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CLDN16Q9Y5I7 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
CLDN16Q9Y5I7 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.59□□□□□ -1.84
CLDN16Q9Y5I7 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CLDN16Q9Y5I7 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CLDN16Q9Y5I7 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
CLDN16Q9Y5I7 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
CLDN16Q9Y5I7 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLDN16Q9Y5I7 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CLDN16Q9Y5I7 RPL7P26-201ENST00000333817 754 ntBASIC3.58□□□□□ -1.84
CLDN16Q9Y5I7 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.58□□□□□ -1.84
CLDN16Q9Y5I7 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.58□□□□□ -1.84
CLDN16Q9Y5I7 JKAMPP1-201ENST00000413804 919 ntBASIC3.58□□□□□ -1.84
CLDN16Q9Y5I7 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.58□□□□□ -1.84
CLDN16Q9Y5I7 AL139247.1-201ENST00000422768 325 ntBASIC3.58□□□□□ -1.84
CLDN16Q9Y5I7 AC002486.1-201ENST00000435098 391 ntBASIC3.58□□□□□ -1.84
CLDN16Q9Y5I7 MTND1P4-201ENST00000435196 415 ntBASIC3.58□□□□□ -1.84
CLDN16Q9Y5I7 AC005094.1-201ENST00000440420 368 ntBASIC3.58□□□□□ -1.84
CLDN16Q9Y5I7 MTCO3P45-201ENST00000443036 613 ntBASIC3.58□□□□□ -1.84
CLDN16Q9Y5I7 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.58□□□□□ -1.84
CLDN16Q9Y5I7 AC006480.1-201ENST00000449887 378 ntBASIC3.58□□□□□ -1.84
CLDN16Q9Y5I7 AC140076.1-201ENST00000449897 361 ntBASIC3.58□□□□□ -1.84
CLDN16Q9Y5I7 PSPHP1-201ENST00000450062 261 ntBASIC3.58□□□□□ -1.84
CLDN16Q9Y5I7 FTH1P2-201ENST00000466086 412 ntBASIC3.58□□□□□ -1.84
CLDN16Q9Y5I7 AC004924.1-201ENST00000480160 781 ntBASIC3.58□□□□□ -1.84
CLDN16Q9Y5I7 AC108860.1-201ENST00000484521 383 ntBASIC3.58□□□□□ -1.84
CLDN16Q9Y5I7 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.58□□□□□ -1.84
CLDN16Q9Y5I7 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.58□□□□□ -1.84
CLDN16Q9Y5I7 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.58□□□□□ -1.84
CLDN16Q9Y5I7 RNU6-1220P-201ENST00000517126 108 ntBASIC3.58□□□□□ -1.84
CLDN16Q9Y5I7 FAM92A1P1-201ENST00000528023 890 ntBASIC3.58□□□□□ -1.84
CLDN16Q9Y5I7 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.58□□□□□ -1.84
CLDN16Q9Y5I7 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.58□□□□□ -1.84
CLDN16Q9Y5I7 AL163153.1-201ENST00000554223 283 ntBASIC3.58□□□□□ -1.84
CLDN16Q9Y5I7 SUB1P2-201ENST00000556401 297 ntBASIC3.58□□□□□ -1.84
CLDN16Q9Y5I7 SNORA62.6-201ENST00000606322 83 ntBASIC3.58□□□□□ -1.84
CLDN16Q9Y5I7 AL591424.2-201ENST00000617023 128 ntBASIC3.58□□□□□ -1.84
CLDN16Q9Y5I7 FRG1KP-201ENST00000623592 341 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms