Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
PCDHGA3Q9Y5H0 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.25□□□□□ -1.73
PCDHGA3Q9Y5H0 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
PCDHGA3Q9Y5H0 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.25□□□□□ -1.73
PCDHGA3Q9Y5H0 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PCDHGA3Q9Y5H0 PRO1804-201ENST00000623780 2050 ntBASIC4.25□□□□□ -1.73
PCDHGA3Q9Y5H0 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PCDHGA3Q9Y5H0 AP001486.2-201ENST00000561652 5113 ntBASIC4.25□□□□□ -1.73
PCDHGA3Q9Y5H0 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
PCDHGA3Q9Y5H0 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.25□□□□□ -1.73
PCDHGA3Q9Y5H0 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PCDHGA3Q9Y5H0 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
PCDHGA3Q9Y5H0 SNORA11F-201ENST00000408237 128 ntBASIC4.25□□□□□ -1.73
PCDHGA3Q9Y5H0 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.25□□□□□ -1.73
PCDHGA3Q9Y5H0 AL161631.1-201ENST00000417933 486 ntBASIC4.25□□□□□ -1.73
PCDHGA3Q9Y5H0 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.25□□□□□ -1.73
PCDHGA3Q9Y5H0 SDCBPP3-201ENST00000419629 891 ntBASIC4.25□□□□□ -1.73
PCDHGA3Q9Y5H0 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.25□□□□□ -1.73
PCDHGA3Q9Y5H0 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.25□□□□□ -1.73
PCDHGA3Q9Y5H0 ATP5JP1-201ENST00000431631 322 ntBASIC4.25□□□□□ -1.73
PCDHGA3Q9Y5H0 RPS6P12-201ENST00000432491 726 ntBASIC4.25□□□□□ -1.73
PCDHGA3Q9Y5H0 VDAC1P3-201ENST00000434069 851 ntBASIC4.25□□□□□ -1.73
PCDHGA3Q9Y5H0 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC4.25□□□□□ -1.73
PCDHGA3Q9Y5H0 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.25□□□□□ -1.73
PCDHGA3Q9Y5H0 AC012158.1-204ENST00000483430 465 ntBASIC4.25□□□□□ -1.73
PCDHGA3Q9Y5H0 VN1R105P-201ENST00000486595 910 ntBASIC4.25□□□□□ -1.73
PCDHGA3Q9Y5H0 PPBPP1-201ENST00000510807 373 ntBASIC4.25□□□□□ -1.73
PCDHGA3Q9Y5H0 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.25□□□□□ -1.73
PCDHGA3Q9Y5H0 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.25□□□□□ -1.73
PCDHGA3Q9Y5H0 OR5AL2P-201ENST00000532185 920 ntBASIC4.25□□□□□ -1.73
PCDHGA3Q9Y5H0 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.25□□□□□ -1.73
PCDHGA3Q9Y5H0 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.25□□□□□ -1.73
PCDHGA3Q9Y5H0 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.25□□□□□ -1.73
PCDHGA3Q9Y5H0 AC025946.2-201ENST00000603398 234 ntBASIC4.25□□□□□ -1.73
PCDHGA3Q9Y5H0 AP001330.4-201ENST00000604350 154 ntBASIC4.25□□□□□ -1.73
PCDHGA3Q9Y5H0 AL365204.3-201ENST00000612448 685 ntBASIC4.25□□□□□ -1.73
PCDHGA3Q9Y5H0 AC004696.1-201ENST00000614345 607 ntBASIC4.25□□□□□ -1.73
PCDHGA3Q9Y5H0 AC025034.2-201ENST00000623264 286 ntBASIC4.25□□□□□ -1.73
PCDHGA3Q9Y5H0 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.25□□□□□ -1.73
PCDHGA3Q9Y5H0 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.25□□□□□ -1.73
PCDHGA3Q9Y5H0 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
PCDHGA3Q9Y5H0 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PCDHGA3Q9Y5H0 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
PCDHGA3Q9Y5H0 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PCDHGA3Q9Y5H0 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PCDHGA3Q9Y5H0 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PCDHGA3Q9Y5H0 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PCDHGA3Q9Y5H0 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PCDHGA3Q9Y5H0 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.24□□□□□ -1.73
PCDHGA3Q9Y5H0 SNORD74.4-201ENST00000364129 80 ntBASIC4.24□□□□□ -1.73
PCDHGA3Q9Y5H0 SNORA62.1-201ENST00000364287 154 ntBASIC4.24□□□□□ -1.73
PCDHGA3Q9Y5H0 RNU1-132P-201ENST00000364300 164 ntBASIC4.24□□□□□ -1.73
PCDHGA3Q9Y5H0 RNU1-64P-201ENST00000365443 163 ntBASIC4.24□□□□□ -1.73
PCDHGA3Q9Y5H0 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
PCDHGA3Q9Y5H0 RNU6-946P-201ENST00000383878 107 ntBASIC4.24□□□□□ -1.73
PCDHGA3Q9Y5H0 RNU6-701P-201ENST00000384059 107 ntBASIC4.24□□□□□ -1.73
PCDHGA3Q9Y5H0 MIR3065-201ENST00000390137 79 ntBASIC4.24□□□□□ -1.73
PCDHGA3Q9Y5H0 AC068050.1-201ENST00000394891 380 ntBASIC4.24□□□□□ -1.73
PCDHGA3Q9Y5H0 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.24□□□□□ -1.73
PCDHGA3Q9Y5H0 CYP4F29P-201ENST00000420685 446 ntBASIC4.24□□□□□ -1.73
PCDHGA3Q9Y5H0 EIF1P3-201ENST00000423841 334 ntBASIC4.24□□□□□ -1.73
PCDHGA3Q9Y5H0 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.24□□□□□ -1.73
PCDHGA3Q9Y5H0 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.24□□□□□ -1.73
PCDHGA3Q9Y5H0 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.24□□□□□ -1.73
PCDHGA3Q9Y5H0 GTF2IP20-201ENST00000431663 360 ntBASIC4.24□□□□□ -1.73
PCDHGA3Q9Y5H0 AL138799.3-201ENST00000438968 350 ntBASIC4.24□□□□□ -1.73
PCDHGA3Q9Y5H0 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.24□□□□□ -1.73
PCDHGA3Q9Y5H0 NEFMP1-201ENST00000443423 1006 ntBASIC4.24□□□□□ -1.73
PCDHGA3Q9Y5H0 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC4.24□□□□□ -1.73
PCDHGA3Q9Y5H0 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.24□□□□□ -1.73
PCDHGA3Q9Y5H0 PCBP2P3-201ENST00000509726 843 ntBASIC4.24□□□□□ -1.73
PCDHGA3Q9Y5H0 AC026402.1-201ENST00000513642 170 ntBASIC4.24□□□□□ -1.73
PCDHGA3Q9Y5H0 AL352979.3-201ENST00000553515 247 ntBASIC4.24□□□□□ -1.73
PCDHGA3Q9Y5H0 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.24□□□□□ -1.73
PCDHGA3Q9Y5H0 MIR1254-2-201ENST00000579553 63 ntBASIC4.24□□□□□ -1.73
PCDHGA3Q9Y5H0 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.24□□□□□ -1.73
PCDHGA3Q9Y5H0 BPIFA4P-203ENST00000603168 689 ntBASIC4.24□□□□□ -1.73
PCDHGA3Q9Y5H0 RNA5SP196-201ENST00000625967 102 ntBASIC4.24□□□□□ -1.73
PCDHGA3Q9Y5H0 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PCDHGA3Q9Y5H0 MAPK10-253ENST00000641010 4072 ntBASIC4.24□□□□□ -1.73
PCDHGA3Q9Y5H0 MTND4P14-201ENST00000435799 1354 ntBASIC4.24□□□□□ -1.73
PCDHGA3Q9Y5H0 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.24□□□□□ -1.73
PCDHGA3Q9Y5H0 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.24□□□□□ -1.73
PCDHGA3Q9Y5H0 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PCDHGA3Q9Y5H0 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
PCDHGA3Q9Y5H0 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHGA3Q9Y5H0 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHGA3Q9Y5H0 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
PCDHGA3Q9Y5H0 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.23□□□□□ -1.73
PCDHGA3Q9Y5H0 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHGA3Q9Y5H0 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHGA3Q9Y5H0 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHGA3Q9Y5H0 RNU6-188P-201ENST00000364207 107 ntBASIC4.23□□□□□ -1.73
PCDHGA3Q9Y5H0 RNA5SP151-201ENST00000365632 117 ntBASIC4.23□□□□□ -1.73
PCDHGA3Q9Y5H0 RNU6-817P-201ENST00000391083 104 ntBASIC4.23□□□□□ -1.73
PCDHGA3Q9Y5H0 AL022722.2-201ENST00000402519 180 ntBASIC4.23□□□□□ -1.73
PCDHGA3Q9Y5H0 AL591416.1-201ENST00000404015 867 ntBASIC4.23□□□□□ -1.73
PCDHGA3Q9Y5H0 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.23□□□□□ -1.73
PCDHGA3Q9Y5H0 Y_RNA.604-201ENST00000410574 102 ntBASIC4.23□□□□□ -1.73
PCDHGA3Q9Y5H0 AL513331.1-201ENST00000411908 397 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 180.7 ms