Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHB1Q9Y5F3 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 Y_RNA.255-201ENST00000364581 97 ntBASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 RNU6-996P-201ENST00000365438 107 ntBASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 Y_RNA.381-201ENST00000365666 102 ntBASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 RNU6-373P-201ENST00000411247 98 ntBASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 RAC1P6-201ENST00000423911 575 ntBASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 MTATP6P16-201ENST00000434543 526 ntBASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 RPL23AP89-201ENST00000439324 255 ntBASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 USP9YP8-201ENST00000441913 500 ntBASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 AL162151.2-201ENST00000448875 158 ntBASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 RPS11P1-201ENST00000451072 473 ntBASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 GMFBP1-201ENST00000467831 427 ntBASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 RN7SL432P-201ENST00000484057 298 ntBASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 RPS27AP13-201ENST00000498403 237 ntBASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 VN1R104P-201ENST00000505115 1009 ntBASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 SNORD60.2-201ENST00000516883 86 ntBASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 IFITM8P-201ENST00000522529 394 ntBASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 HIF1AP1-201ENST00000553642 175 ntBASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 MIR4286-201ENST00000580651 93 ntBASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 MIR4444-1-201ENST00000581696 74 ntBASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 MIR4444-2-201ENST00000584390 74 ntBASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 AC006116.10-201ENST00000591836 581 ntBASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 AL022099.1-201ENST00000604551 712 ntBASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 AC012443.1-201ENST00000605605 231 ntBASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 AC007390.2-201ENST00000606229 3803 ntBASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 AC015967.1-201ENST00000619893 476 ntBASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 AC024940.5-201ENST00000622889 474 ntBASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 AL445363.3-201ENST00000623080 671 ntBASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 AC110801.1-201ENST00000623590 212 ntBASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 AP005264.7-201ENST00000625003 745 ntBASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 AC011266.1-201ENST00000624119 3569 ntBASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 AC006020.1-201ENST00000420179 1854 ntBASIC4.2□□□□□ -1.74
PCDHB1Q9Y5F3 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 RNA5SP235-201ENST00000365411 114 ntBASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 AL591416.1-201ENST00000404015 867 ntBASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 AL359634.1-202ENST00000404721 284 ntBASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 RNA5SP36-201ENST00000410197 133 ntBASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 EI24P1-201ENST00000416584 867 ntBASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 RPL23AP46-201ENST00000438548 490 ntBASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 AL138799.3-201ENST00000438968 350 ntBASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 AL358232.1-201ENST00000448030 501 ntBASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 RPL23AP2-201ENST00000471227 466 ntBASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 AC010631.1-201ENST00000474150 156 ntBASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 S100A11P1-201ENST00000477525 312 ntBASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 RPS29P19-201ENST00000479709 171 ntBASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 AC091951.2-201ENST00000500762 203 ntBASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 AC017037.1-201ENST00000508460 471 ntBASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 PCBP2P3-201ENST00000509726 843 ntBASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 RNA5SP401-201ENST00000515920 127 ntBASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 RNA5SP49-201ENST00000516450 115 ntBASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 RAB11AP2-201ENST00000545905 639 ntBASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 AC063950.1-201ENST00000552036 308 ntBASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 SNRPGP15-201ENST00000600149 222 ntBASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 C8orf59P2-201ENST00000603441 271 ntBASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 BNIP3P9-201ENST00000603714 553 ntBASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 AL353748.2-201ENST00000622148 471 ntBASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms