Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 CDC27P3-201ENST00000635418 1910 ntBASIC1.46□□□□□ -2.18
AP4S1Q9Y587 RNA5SP258-201ENST00000362750 119 ntBASIC1.45□□□□□ -2.18
AP4S1Q9Y587 RNU6-374P-201ENST00000364146 108 ntBASIC1.45□□□□□ -2.18
AP4S1Q9Y587 RNA5SP387-201ENST00000364226 106 ntBASIC1.45□□□□□ -2.18
AP4S1Q9Y587 Z98749.2-208ENST00000381646 500 ntBASIC1.45□□□□□ -2.18
AP4S1Q9Y587 U8.14-201ENST00000390843 143 ntBASIC1.45□□□□□ -2.18
AP4S1Q9Y587 RNA5SP56-201ENST00000410277 118 ntBASIC1.45□□□□□ -2.18
AP4S1Q9Y587 Z92545.1-201ENST00000411782 234 ntBASIC1.45□□□□□ -2.18
AP4S1Q9Y587 BX510359.4-201ENST00000423750 193 ntBASIC1.45□□□□□ -2.18
AP4S1Q9Y587 AC079780.1-201ENST00000428259 207 ntBASIC1.45□□□□□ -2.18
AP4S1Q9Y587 TPTE2P6-202ENST00000445572 1007 ntBASIC1.45□□□□□ -2.18
AP4S1Q9Y587 HMGB1P48-201ENST00000446155 598 ntBASIC1.45□□□□□ -2.18
AP4S1Q9Y587 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC1.45□□□□□ -2.18
AP4S1Q9Y587 RPL23AP63-201ENST00000498752 471 ntBASIC1.45□□□□□ -2.18
AP4S1Q9Y587 AC096751.1-202ENST00000502691 1067 ntBASIC1.45□□□□□ -2.18
AP4S1Q9Y587 CBX3P3-201ENST00000508108 532 ntBASIC1.45□□□□□ -2.18
AP4S1Q9Y587 AC108157.1-201ENST00000510511 539 ntBASIC1.45□□□□□ -2.18
AP4S1Q9Y587 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC1.45□□□□□ -2.18
AP4S1Q9Y587 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.45□□□□□ -2.18
AP4S1Q9Y587 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.45□□□□□ -2.18
AP4S1Q9Y587 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.45□□□□□ -2.18
AP4S1Q9Y587 CBX3P4-201ENST00000538909 354 ntBASIC1.45□□□□□ -2.18
AP4S1Q9Y587 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.45□□□□□ -2.18
AP4S1Q9Y587 MIR3609-201ENST00000582661 80 ntBASIC1.45□□□□□ -2.18
AP4S1Q9Y587 AC090312.2-201ENST00000582687 378 ntBASIC1.45□□□□□ -2.18
AP4S1Q9Y587 MIR3616-201ENST00000584070 92 ntBASIC1.45□□□□□ -2.18
AP4S1Q9Y587 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.45□□□□□ -2.18
AP4S1Q9Y587 AC003001.2-201ENST00000616294 831 ntBASIC1.45□□□□□ -2.18
AP4S1Q9Y587 HPVC1-201ENST00000629899 1198 ntBASIC1.45□□□□□ -2.18
AP4S1Q9Y587 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC1.45□□□□□ -2.18
AP4S1Q9Y587 RNU1-62P-201ENST00000362599 164 ntBASIC1.44□□□□□ -2.18
AP4S1Q9Y587 Y_RNA.493-201ENST00000384422 102 ntBASIC1.44□□□□□ -2.18
AP4S1Q9Y587 MIR483-201ENST00000385070 76 ntBASIC1.44□□□□□ -2.18
AP4S1Q9Y587 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
AP4S1Q9Y587 MIR1304-201ENST00000408243 91 ntBASIC1.44□□□□□ -2.18
AP4S1Q9Y587 RN7SKP51-201ENST00000410781 304 ntBASIC1.44□□□□□ -2.18
AP4S1Q9Y587 AC092745.2-202ENST00000411880 369 ntBASIC1.44□□□□□ -2.18
AP4S1Q9Y587 FCF1P2-201ENST00000415284 583 ntBASIC1.44□□□□□ -2.18
AP4S1Q9Y587 AC006946.1-201ENST00000429106 328 ntBASIC1.44□□□□□ -2.18
AP4S1Q9Y587 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.44□□□□□ -2.18
AP4S1Q9Y587 USP9YP10-201ENST00000454868 628 ntBASIC1.44□□□□□ -2.18
AP4S1Q9Y587 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.44□□□□□ -2.18
AP4S1Q9Y587 PNPLA4P1-201ENST00000458328 305 ntBASIC1.44□□□□□ -2.18
AP4S1Q9Y587 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.44□□□□□ -2.18
AP4S1Q9Y587 MTCYBP17-201ENST00000503579 789 ntBASIC1.44□□□□□ -2.18
AP4S1Q9Y587 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.44□□□□□ -2.18
AP4S1Q9Y587 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.44□□□□□ -2.18
AP4S1Q9Y587 Y_RNA.675-201ENST00000516389 149 ntBASIC1.44□□□□□ -2.18
AP4S1Q9Y587 RNU6-1004P-201ENST00000516584 111 ntBASIC1.44□□□□□ -2.18
AP4S1Q9Y587 AP005902.1-201ENST00000521358 186 ntBASIC1.44□□□□□ -2.18
AP4S1Q9Y587 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.44□□□□□ -2.18
AP4S1Q9Y587 ARL2BPP2-201ENST00000550907 489 ntBASIC1.44□□□□□ -2.18
AP4S1Q9Y587 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC1.44□□□□□ -2.18
AP4S1Q9Y587 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.44□□□□□ -2.18
AP4S1Q9Y587 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.44□□□□□ -2.18
AP4S1Q9Y587 AC087241.4-201ENST00000612441 480 ntBASIC1.44□□□□□ -2.18
AP4S1Q9Y587 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
AP4S1Q9Y587 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
AP4S1Q9Y587 AC104454.1-201ENST00000421341 1401 ntBASIC1.43□□□□□ -2.18
AP4S1Q9Y587 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
AP4S1Q9Y587 RNU5D-1-201ENST00000363299 116 ntBASIC1.43□□□□□ -2.18
AP4S1Q9Y587 MTCO3P46-201ENST00000425787 232 ntBASIC1.43□□□□□ -2.18
AP4S1Q9Y587 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.43□□□□□ -2.18
AP4S1Q9Y587 VN1R108P-201ENST00000431580 830 ntBASIC1.43□□□□□ -2.18
AP4S1Q9Y587 BX248409.1-201ENST00000455497 255 ntBASIC1.43□□□□□ -2.18
AP4S1Q9Y587 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.43□□□□□ -2.18
AP4S1Q9Y587 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.43□□□□□ -2.18
AP4S1Q9Y587 AC072039.1-201ENST00000477611 581 ntBASIC1.43□□□□□ -2.18
AP4S1Q9Y587 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC1.43□□□□□ -2.18
AP4S1Q9Y587 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.43□□□□□ -2.18
AP4S1Q9Y587 RNU6-970P-201ENST00000516312 107 ntBASIC1.43□□□□□ -2.18
AP4S1Q9Y587 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.43□□□□□ -2.18
AP4S1Q9Y587 AL669831.4-202ENST00000590817 238 ntBASIC1.43□□□□□ -2.18
AP4S1Q9Y587 AL355812.1-201ENST00000603215 216 ntBASIC1.43□□□□□ -2.18
AP4S1Q9Y587 AC087359.1-201ENST00000508335 1740 ntBASIC1.43□□□□□ -2.18
AP4S1Q9Y587 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
AP4S1Q9Y587 RNU1-105P-201ENST00000363470 161 ntBASIC1.42□□□□□ -2.18
AP4S1Q9Y587 RNU6-1243P-201ENST00000364028 107 ntBASIC1.42□□□□□ -2.18
AP4S1Q9Y587 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
AP4S1Q9Y587 SNORA40.18-201ENST00000391200 128 ntBASIC1.42□□□□□ -2.18
AP4S1Q9Y587 SNRPEP2-201ENST00000397592 279 ntBASIC1.42□□□□□ -2.18
AP4S1Q9Y587 AL133384.1-201ENST00000412744 351 ntBASIC1.42□□□□□ -2.18
AP4S1Q9Y587 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.42□□□□□ -2.18
AP4S1Q9Y587 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.42□□□□□ -2.18
AP4S1Q9Y587 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.42□□□□□ -2.18
AP4S1Q9Y587 ARPC3P1-201ENST00000437218 533 ntBASIC1.42□□□□□ -2.18
AP4S1Q9Y587 RPS15AP27-201ENST00000449183 343 ntBASIC1.42□□□□□ -2.18
AP4S1Q9Y587 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.42□□□□□ -2.18
AP4S1Q9Y587 AC092798.1-201ENST00000458542 409 ntBASIC1.42□□□□□ -2.18
AP4S1Q9Y587 AC140059.1-201ENST00000489238 361 ntBASIC1.42□□□□□ -2.18
AP4S1Q9Y587 AC026801.1-201ENST00000497178 464 ntBASIC1.42□□□□□ -2.18
AP4S1Q9Y587 SNORA31.25-201ENST00000517242 134 ntBASIC1.42□□□□□ -2.18
AP4S1Q9Y587 RNU2-19P-201ENST00000517288 84 ntBASIC1.42□□□□□ -2.18
AP4S1Q9Y587 HSBP1P1-201ENST00000555205 166 ntBASIC1.42□□□□□ -2.18
AP4S1Q9Y587 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.42□□□□□ -2.18
AP4S1Q9Y587 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.42□□□□□ -2.18
AP4S1Q9Y587 MIR4287-201ENST00000579398 78 ntBASIC1.42□□□□□ -2.18
AP4S1Q9Y587 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.42□□□□□ -2.18
AP4S1Q9Y587 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.42□□□□□ -2.18
AP4S1Q9Y587 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms