Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.46□□□□□ -1.54
HCN4Q9Y3Q4 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.46□□□□□ -1.54
HCN4Q9Y3Q4 AC090971.4-201ENST00000560291 1800 ntBASIC5.46□□□□□ -1.54
HCN4Q9Y3Q4 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HCN4Q9Y3Q4 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HCN4Q9Y3Q4 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HCN4Q9Y3Q4 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HCN4Q9Y3Q4 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HCN4Q9Y3Q4 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
HCN4Q9Y3Q4 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.45□□□□□ -1.54
HCN4Q9Y3Q4 MAPK10-328ENST00000641553 4009 ntBASIC5.45□□□□□ -1.54
HCN4Q9Y3Q4 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HCN4Q9Y3Q4 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
HCN4Q9Y3Q4 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HCN4Q9Y3Q4 RNA5SP187-201ENST00000384400 119 ntBASIC5.45□□□□□ -1.54
HCN4Q9Y3Q4 AP000580.1-201ENST00000404439 358 ntBASIC5.45□□□□□ -1.54
HCN4Q9Y3Q4 AC096921.1-201ENST00000411661 375 ntBASIC5.45□□□□□ -1.54
HCN4Q9Y3Q4 ELOCP20-201ENST00000422460 345 ntBASIC5.45□□□□□ -1.54
HCN4Q9Y3Q4 HMGN2P27-201ENST00000427352 270 ntBASIC5.45□□□□□ -1.54
HCN4Q9Y3Q4 AC090774.1-201ENST00000435925 246 ntBASIC5.45□□□□□ -1.54
HCN4Q9Y3Q4 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.45□□□□□ -1.54
HCN4Q9Y3Q4 AC004866.2-201ENST00000438285 481 ntBASIC5.45□□□□□ -1.54
HCN4Q9Y3Q4 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HCN4Q9Y3Q4 MRPL48P1-201ENST00000445390 636 ntBASIC5.45□□□□□ -1.54
HCN4Q9Y3Q4 RPL7L1P1-201ENST00000448259 785 ntBASIC5.45□□□□□ -1.54
HCN4Q9Y3Q4 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC5.45□□□□□ -1.54
HCN4Q9Y3Q4 RPL12P20-201ENST00000475538 479 ntBASIC5.45□□□□□ -1.54
HCN4Q9Y3Q4 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.45□□□□□ -1.54
HCN4Q9Y3Q4 AC140172.1-201ENST00000502928 141 ntBASIC5.45□□□□□ -1.54
HCN4Q9Y3Q4 AC093840.1-201ENST00000511599 336 ntBASIC5.45□□□□□ -1.54
HCN4Q9Y3Q4 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
HCN4Q9Y3Q4 SNORA25.11-201ENST00000515935 105 ntBASIC5.45□□□□□ -1.54
HCN4Q9Y3Q4 RNU6-1095P-201ENST00000516148 108 ntBASIC5.45□□□□□ -1.54
HCN4Q9Y3Q4 RNA5SP464-201ENST00000516251 108 ntBASIC5.45□□□□□ -1.54
HCN4Q9Y3Q4 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5.45□□□□□ -1.54
HCN4Q9Y3Q4 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.45□□□□□ -1.54
HCN4Q9Y3Q4 AC012339.2-201ENST00000523996 453 ntBASIC5.45□□□□□ -1.54
HCN4Q9Y3Q4 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC5.45□□□□□ -1.54
HCN4Q9Y3Q4 SARNP-203ENST00000552080 726 ntTSL 2 BASIC5.45□□□□□ -1.54
HCN4Q9Y3Q4 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.45□□□□□ -1.54
HCN4Q9Y3Q4 AC009852.2-201ENST00000567898 485 ntBASIC5.45□□□□□ -1.54
HCN4Q9Y3Q4 AL450472.3-201ENST00000615578 367 ntBASIC5.45□□□□□ -1.54
HCN4Q9Y3Q4 AC025574.2-201ENST00000615621 514 ntBASIC5.45□□□□□ -1.54
HCN4Q9Y3Q4 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
HCN4Q9Y3Q4 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
HCN4Q9Y3Q4 FAM91A3P-201ENST00000456826 2544 ntBASIC5.45□□□□□ -1.54
HCN4Q9Y3Q4 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.45□□□□□ -1.54
HCN4Q9Y3Q4 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HCN4Q9Y3Q4 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HCN4Q9Y3Q4 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
HCN4Q9Y3Q4 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
HCN4Q9Y3Q4 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HCN4Q9Y3Q4 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.44□□□□□ -1.54
HCN4Q9Y3Q4 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.44□□□□□ -1.54
HCN4Q9Y3Q4 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HCN4Q9Y3Q4 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HCN4Q9Y3Q4 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.44□□□□□ -1.54
HCN4Q9Y3Q4 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HCN4Q9Y3Q4 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.44□□□□□ -1.54
HCN4Q9Y3Q4 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HCN4Q9Y3Q4 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
HCN4Q9Y3Q4 AL450326.2-201ENST00000421913 1962 ntBASIC5.44□□□□□ -1.54
HCN4Q9Y3Q4 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.44□□□□□ -1.54
HCN4Q9Y3Q4 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.44□□□□□ -1.54
HCN4Q9Y3Q4 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HCN4Q9Y3Q4 AL121886.1-201ENST00000358609 435 ntBASIC5.44□□□□□ -1.54
HCN4Q9Y3Q4 RNU6-1303P-201ENST00000364841 107 ntBASIC5.44□□□□□ -1.54
HCN4Q9Y3Q4 Y_RNA.483-201ENST00000384380 101 ntBASIC5.44□□□□□ -1.54
HCN4Q9Y3Q4 Y_RNA.518-201ENST00000384552 113 ntBASIC5.44□□□□□ -1.54
HCN4Q9Y3Q4 Y_RNA.526-201ENST00000384572 110 ntBASIC5.44□□□□□ -1.54
HCN4Q9Y3Q4 MIR1250-201ENST00000408098 113 ntBASIC5.44□□□□□ -1.54
HCN4Q9Y3Q4 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.44□□□□□ -1.54
HCN4Q9Y3Q4 AL137014.1-201ENST00000420490 1226 ntBASIC5.44□□□□□ -1.54
HCN4Q9Y3Q4 PPP1R11P2-201ENST00000423543 382 ntBASIC5.44□□□□□ -1.54
HCN4Q9Y3Q4 RPS27AP12-201ENST00000429552 465 ntBASIC5.44□□□□□ -1.54
HCN4Q9Y3Q4 AC138761.5-201ENST00000433967 325 ntBASIC5.44□□□□□ -1.54
HCN4Q9Y3Q4 GSTM5P1-201ENST00000434751 660 ntBASIC5.44□□□□□ -1.54
HCN4Q9Y3Q4 FCF1P4-201ENST00000448326 183 ntBASIC5.44□□□□□ -1.54
HCN4Q9Y3Q4 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.44□□□□□ -1.54
HCN4Q9Y3Q4 MTCO3P8-201ENST00000453691 755 ntBASIC5.44□□□□□ -1.54
HCN4Q9Y3Q4 AP000942.1-201ENST00000463969 747 ntBASIC5.44□□□□□ -1.54
HCN4Q9Y3Q4 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.44□□□□□ -1.54
HCN4Q9Y3Q4 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC5.44□□□□□ -1.54
HCN4Q9Y3Q4 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.44□□□□□ -1.54
HCN4Q9Y3Q4 AC105384.2-201ENST00000508433 640 ntBASIC5.44□□□□□ -1.54
HCN4Q9Y3Q4 RNU7-4P-201ENST00000516961 62 ntBASIC5.44□□□□□ -1.54
HCN4Q9Y3Q4 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.44□□□□□ -1.54
HCN4Q9Y3Q4 AC087369.1-201ENST00000520775 996 ntBASIC5.44□□□□□ -1.54
HCN4Q9Y3Q4 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.44□□□□□ -1.54
HCN4Q9Y3Q4 OR4H12P-201ENST00000556269 907 ntBASIC5.44□□□□□ -1.54
HCN4Q9Y3Q4 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC5.44□□□□□ -1.54
HCN4Q9Y3Q4 AC006272.2-201ENST00000594725 163 ntBASIC5.44□□□□□ -1.54
HCN4Q9Y3Q4 RNU6-85P-201ENST00000605989 107 ntBASIC5.44□□□□□ -1.54
HCN4Q9Y3Q4 AC098479.1-201ENST00000609225 154 ntBASIC5.44□□□□□ -1.54
HCN4Q9Y3Q4 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
HCN4Q9Y3Q4 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
HCN4Q9Y3Q4 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.44□□□□□ -1.54
HCN4Q9Y3Q4 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HCN4Q9Y3Q4 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HCN4Q9Y3Q4 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms