Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 NUP58P1-201ENST00000502546 1738 ntBASIC2.25□□□□□ -2.05
SHANK2Q9UPX8 SNORD56.5-201ENST00000364281 72 ntBASIC2.25□□□□□ -2.05
SHANK2Q9UPX8 RNU1-101P-201ENST00000391171 127 ntBASIC2.25□□□□□ -2.05
SHANK2Q9UPX8 AL589994.1-201ENST00000404962 340 ntBASIC2.25□□□□□ -2.05
SHANK2Q9UPX8 SRIP3-201ENST00000413200 219 ntBASIC2.25□□□□□ -2.05
SHANK2Q9UPX8 HSPE1P1-201ENST00000421494 318 ntBASIC2.25□□□□□ -2.05
SHANK2Q9UPX8 RFESDP1-201ENST00000422350 461 ntBASIC2.25□□□□□ -2.05
SHANK2Q9UPX8 ELOCP6-201ENST00000429066 328 ntBASIC2.25□□□□□ -2.05
SHANK2Q9UPX8 HMGN1P33-201ENST00000432945 451 ntBASIC2.25□□□□□ -2.05
SHANK2Q9UPX8 KATNBL1P3-201ENST00000443475 909 ntBASIC2.25□□□□□ -2.05
SHANK2Q9UPX8 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.25□□□□□ -2.05
SHANK2Q9UPX8 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.25□□□□□ -2.05
SHANK2Q9UPX8 ELOCP12-201ENST00000458706 328 ntBASIC2.25□□□□□ -2.05
SHANK2Q9UPX8 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
SHANK2Q9UPX8 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.25□□□□□ -2.05
SHANK2Q9UPX8 RNU1-92P-201ENST00000517017 135 ntBASIC2.25□□□□□ -2.05
SHANK2Q9UPX8 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC2.25□□□□□ -2.05
SHANK2Q9UPX8 RPL21P5-201ENST00000554662 472 ntBASIC2.25□□□□□ -2.05
SHANK2Q9UPX8 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.25□□□□□ -2.05
SHANK2Q9UPX8 AC068944.2-201ENST00000610373 403 ntBASIC2.25□□□□□ -2.05
SHANK2Q9UPX8 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
SHANK2Q9UPX8 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
SHANK2Q9UPX8 PRELID3BP11-201ENST00000414230 479 ntBASIC2.24□□□□□ -2.05
SHANK2Q9UPX8 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.24□□□□□ -2.05
SHANK2Q9UPX8 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.24□□□□□ -2.05
SHANK2Q9UPX8 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
SHANK2Q9UPX8 AL359273.1-201ENST00000510918 627 ntBASIC2.24□□□□□ -2.05
SHANK2Q9UPX8 RNA5SP364-201ENST00000516938 78 ntBASIC2.24□□□□□ -2.05
SHANK2Q9UPX8 OR4R1P-201ENST00000529879 463 ntBASIC2.24□□□□□ -2.05
SHANK2Q9UPX8 FAM106CP-201ENST00000582212 507 ntBASIC2.24□□□□□ -2.05
SHANK2Q9UPX8 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
SHANK2Q9UPX8 STMN1P1-201ENST00000617809 440 ntBASIC2.24□□□□□ -2.05
SHANK2Q9UPX8 AL158801.5-201ENST00000623123 465 ntBASIC2.24□□□□□ -2.05
SHANK2Q9UPX8 AL133216.2-202ENST00000634512 349 ntBASIC2.24□□□□□ -2.05
SHANK2Q9UPX8 MTND4P34-201ENST00000572715 1371 ntBASIC2.24□□□□□ -2.05
SHANK2Q9UPX8 RPL23AP29-201ENST00000397284 453 ntBASIC2.23□□□□□ -2.05
SHANK2Q9UPX8 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.23□□□□□ -2.05
SHANK2Q9UPX8 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.23□□□□□ -2.05
SHANK2Q9UPX8 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
SHANK2Q9UPX8 CALM1P2-201ENST00000452941 448 ntBASIC2.23□□□□□ -2.05
SHANK2Q9UPX8 snoU109.4-201ENST00000458953 143 ntBASIC2.23□□□□□ -2.05
SHANK2Q9UPX8 RN7SKP49-201ENST00000516675 260 ntBASIC2.23□□□□□ -2.05
SHANK2Q9UPX8 RNU6-1223P-201ENST00000517124 104 ntBASIC2.23□□□□□ -2.05
SHANK2Q9UPX8 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.23□□□□□ -2.05
SHANK2Q9UPX8 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.23□□□□□ -2.05
SHANK2Q9UPX8 MIR6840-201ENST00000611937 71 ntBASIC2.23□□□□□ -2.05
SHANK2Q9UPX8 AC121761.2-201ENST00000617300 689 ntBASIC2.23□□□□□ -2.05
SHANK2Q9UPX8 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
SHANK2Q9UPX8 AC131280.1-202ENST00000624067 4211 ntBASIC2.23□□□□□ -2.05
SHANK2Q9UPX8 AL157700.1-201ENST00000561973 1432 ntBASIC2.23□□□□□ -2.05
SHANK2Q9UPX8 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.23□□□□□ -2.05
SHANK2Q9UPX8 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SHANK2Q9UPX8 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC2.22□□□□□ -2.05
SHANK2Q9UPX8 Z85995.1-201ENST00000415547 335 ntBASIC2.22□□□□□ -2.05
SHANK2Q9UPX8 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.22□□□□□ -2.05
SHANK2Q9UPX8 RPS29P29-201ENST00000456396 171 ntBASIC2.22□□□□□ -2.05
SHANK2Q9UPX8 AF131216.2-201ENST00000512316 564 ntBASIC2.22□□□□□ -2.05
SHANK2Q9UPX8 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC2.22□□□□□ -2.05
SHANK2Q9UPX8 AC022634.1-201ENST00000520765 532 ntBASIC2.22□□□□□ -2.05
SHANK2Q9UPX8 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2.22□□□□□ -2.05
SHANK2Q9UPX8 AP005435.4-201ENST00000529514 284 ntBASIC2.22□□□□□ -2.05
SHANK2Q9UPX8 AC011712.1-201ENST00000588959 234 ntBASIC2.22□□□□□ -2.05
SHANK2Q9UPX8 AL391646.1-201ENST00000603860 190 ntBASIC2.22□□□□□ -2.05
SHANK2Q9UPX8 AC091895.1-201ENST00000624494 256 ntBASIC2.22□□□□□ -2.05
SHANK2Q9UPX8 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.22□□□□□ -2.05
SHANK2Q9UPX8 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.05
SHANK2Q9UPX8 AC002546.1-201ENST00000588041 2504 ntBASIC2.21□□□□□ -2.06
SHANK2Q9UPX8 RNU1-22P-201ENST00000363334 158 ntBASIC2.21□□□□□ -2.06
SHANK2Q9UPX8 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.21□□□□□ -2.06
SHANK2Q9UPX8 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.21□□□□□ -2.06
SHANK2Q9UPX8 OR4V1P-201ENST00000525394 1140 ntBASIC2.21□□□□□ -2.06
SHANK2Q9UPX8 AC139103.1-201ENST00000534696 1030 ntBASIC2.21□□□□□ -2.06
SHANK2Q9UPX8 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.21□□□□□ -2.06
SHANK2Q9UPX8 MIR3660-201ENST00000584845 100 ntBASIC2.21□□□□□ -2.06
SHANK2Q9UPX8 AC140725.3-201ENST00000616193 880 ntBASIC2.21□□□□□ -2.06
SHANK2Q9UPX8 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
SHANK2Q9UPX8 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
SHANK2Q9UPX8 AL354695.1-201ENST00000427935 228 ntBASIC2.2□□□□□ -2.06
SHANK2Q9UPX8 AC034244.1-201ENST00000507687 207 ntBASIC2.2□□□□□ -2.06
SHANK2Q9UPX8 AC006390.1-201ENST00000508068 283 ntBASIC2.2□□□□□ -2.06
SHANK2Q9UPX8 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.2□□□□□ -2.06
SHANK2Q9UPX8 AC110792.3-201ENST00000595906 1614 ntBASIC2.2□□□□□ -2.06
SHANK2Q9UPX8 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.2□□□□□ -2.06
SHANK2Q9UPX8 MIR320A-201ENST00000385302 82 ntBASIC2.2□□□□□ -2.06
SHANK2Q9UPX8 FO393413.1-201ENST00000402892 195 ntBASIC2.2□□□□□ -2.06
SHANK2Q9UPX8 AL030996.1-201ENST00000411430 235 ntBASIC2.2□□□□□ -2.06
SHANK2Q9UPX8 AL357078.2-201ENST00000416486 427 ntBASIC2.2□□□□□ -2.06
SHANK2Q9UPX8 AL513185.2-201ENST00000425543 193 ntBASIC2.2□□□□□ -2.06
SHANK2Q9UPX8 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.2□□□□□ -2.06
SHANK2Q9UPX8 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.2□□□□□ -2.06
SHANK2Q9UPX8 Z96811.1-201ENST00000445880 108 ntBASIC2.2□□□□□ -2.06
SHANK2Q9UPX8 RPS29P20-201ENST00000489592 171 ntBASIC2.2□□□□□ -2.06
SHANK2Q9UPX8 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.2□□□□□ -2.06
SHANK2Q9UPX8 OR5H4P-201ENST00000510851 923 ntBASIC2.2□□□□□ -2.06
SHANK2Q9UPX8 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.2□□□□□ -2.06
SHANK2Q9UPX8 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.2□□□□□ -2.06
SHANK2Q9UPX8 SNORA67.1-201ENST00000364749 141 ntBASIC2.19□□□□□ -2.06
SHANK2Q9UPX8 RPL23AP47-201ENST00000408017 460 ntBASIC2.19□□□□□ -2.06
SHANK2Q9UPX8 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC2.19□□□□□ -2.06
SHANK2Q9UPX8 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms