Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ZC3H4Q9UPT8 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
ZC3H4Q9UPT8 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ZC3H4Q9UPT8 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC6.1□□□□□ -1.43
ZC3H4Q9UPT8 AC000374.1-201ENST00000434698 1745 ntBASIC6.1□□□□□ -1.43
ZC3H4Q9UPT8 Y_RNA.14-201ENST00000362415 103 ntBASIC6.1□□□□□ -1.43
ZC3H4Q9UPT8 SNORA37-201ENST00000384504 129 ntBASIC6.1□□□□□ -1.43
ZC3H4Q9UPT8 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
ZC3H4Q9UPT8 RPS23P10-201ENST00000416185 486 ntBASIC6.1□□□□□ -1.43
ZC3H4Q9UPT8 RPS27AP12-201ENST00000429552 465 ntBASIC6.1□□□□□ -1.43
ZC3H4Q9UPT8 AL158071.1-201ENST00000430315 461 ntBASIC6.1□□□□□ -1.43
ZC3H4Q9UPT8 CYCSP43-201ENST00000438233 310 ntBASIC6.1□□□□□ -1.43
ZC3H4Q9UPT8 NEFMP1-201ENST00000443423 1006 ntBASIC6.1□□□□□ -1.43
ZC3H4Q9UPT8 LINC02210-201ENST00000444561 288 ntBASIC6.1□□□□□ -1.43
ZC3H4Q9UPT8 TDGF1P1-201ENST00000445734 527 ntBASIC6.1□□□□□ -1.43
ZC3H4Q9UPT8 MTCO3P8-201ENST00000453691 755 ntBASIC6.1□□□□□ -1.43
ZC3H4Q9UPT8 SCARNA20.4-201ENST00000516969 131 ntBASIC6.1□□□□□ -1.43
ZC3H4Q9UPT8 FTH1P11-201ENST00000517577 551 ntBASIC6.1□□□□□ -1.43
ZC3H4Q9UPT8 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC6.1□□□□□ -1.43
ZC3H4Q9UPT8 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.1□□□□□ -1.43
ZC3H4Q9UPT8 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC6.1□□□□□ -1.43
ZC3H4Q9UPT8 AC096772.1-201ENST00000609146 564 ntBASIC6.1□□□□□ -1.43
ZC3H4Q9UPT8 AL355810.1-201ENST00000614629 552 ntBASIC6.1□□□□□ -1.43
ZC3H4Q9UPT8 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ZC3H4Q9UPT8 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ZC3H4Q9UPT8 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ZC3H4Q9UPT8 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
ZC3H4Q9UPT8 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ZC3H4Q9UPT8 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
ZC3H4Q9UPT8 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
ZC3H4Q9UPT8 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ZC3H4Q9UPT8 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
ZC3H4Q9UPT8 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC6.09□□□□□ -1.43
ZC3H4Q9UPT8 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ZC3H4Q9UPT8 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ZC3H4Q9UPT8 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ZC3H4Q9UPT8 OR56A5-201ENST00000340110 738 ntBASIC6.09□□□□□ -1.43
ZC3H4Q9UPT8 RN7SKP153-201ENST00000365026 316 ntBASIC6.09□□□□□ -1.43
ZC3H4Q9UPT8 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
ZC3H4Q9UPT8 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
ZC3H4Q9UPT8 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC6.09□□□□□ -1.43
ZC3H4Q9UPT8 UBE2V1P4-201ENST00000425374 344 ntBASIC6.09□□□□□ -1.43
ZC3H4Q9UPT8 GAS5-208ENST00000425771 242 ntTSL 3 BASIC6.09□□□□□ -1.43
ZC3H4Q9UPT8 AL591704.1-201ENST00000432574 275 ntBASIC6.09□□□□□ -1.43
ZC3H4Q9UPT8 AC016831.4-201ENST00000438302 307 ntBASIC6.09□□□□□ -1.43
ZC3H4Q9UPT8 AC073910.1-201ENST00000445047 438 ntBASIC6.09□□□□□ -1.43
ZC3H4Q9UPT8 CEACAMP6-201ENST00000452007 574 ntBASIC6.09□□□□□ -1.43
ZC3H4Q9UPT8 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
ZC3H4Q9UPT8 RPL39P38-201ENST00000467018 153 ntBASIC6.09□□□□□ -1.43
ZC3H4Q9UPT8 RNU6-1023P-201ENST00000516137 106 ntBASIC6.09□□□□□ -1.43
ZC3H4Q9UPT8 RNU6-677P-201ENST00000516914 101 ntBASIC6.09□□□□□ -1.43
ZC3H4Q9UPT8 AC007991.1-201ENST00000522680 631 ntBASIC6.09□□□□□ -1.43
ZC3H4Q9UPT8 OR5D17P-201ENST00000531492 978 ntBASIC6.09□□□□□ -1.43
ZC3H4Q9UPT8 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
ZC3H4Q9UPT8 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC6.09□□□□□ -1.43
ZC3H4Q9UPT8 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC6.09□□□□□ -1.43
ZC3H4Q9UPT8 AL161713.1-201ENST00000555538 145 ntBASIC6.09□□□□□ -1.43
ZC3H4Q9UPT8 MIR5188-201ENST00000583467 113 ntBASIC6.09□□□□□ -1.43
ZC3H4Q9UPT8 AC012119.1-201ENST00000603184 222 ntBASIC6.09□□□□□ -1.43
ZC3H4Q9UPT8 ELOCP5-201ENST00000604924 333 ntBASIC6.09□□□□□ -1.43
ZC3H4Q9UPT8 HMGB1P50-201ENST00000605814 607 ntBASIC6.09□□□□□ -1.43
ZC3H4Q9UPT8 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ZC3H4Q9UPT8 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.09□□□□□ -1.43
ZC3H4Q9UPT8 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ZC3H4Q9UPT8 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ZC3H4Q9UPT8 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ZC3H4Q9UPT8 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC6.09□□□□□ -1.43
ZC3H4Q9UPT8 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ZC3H4Q9UPT8 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC6.09□□□□□ -1.43
ZC3H4Q9UPT8 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.44
ZC3H4Q9UPT8 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ZC3H4Q9UPT8 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
ZC3H4Q9UPT8 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ZC3H4Q9UPT8 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ZC3H4Q9UPT8 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.08□□□□□ -1.44
ZC3H4Q9UPT8 PABPC1P7-201ENST00000413177 1513 ntBASIC6.08□□□□□ -1.44
ZC3H4Q9UPT8 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
ZC3H4Q9UPT8 RNY3P11-201ENST00000364153 102 ntBASIC6.08□□□□□ -1.44
ZC3H4Q9UPT8 RNU6-339P-201ENST00000384310 107 ntBASIC6.08□□□□□ -1.44
ZC3H4Q9UPT8 MT-TC-201ENST00000387405 66 ntBASIC6.08□□□□□ -1.44
ZC3H4Q9UPT8 RPL31P2-201ENST00000413849 377 ntBASIC6.08□□□□□ -1.44
ZC3H4Q9UPT8 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC6.08□□□□□ -1.44
ZC3H4Q9UPT8 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC6.08□□□□□ -1.44
ZC3H4Q9UPT8 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.08□□□□□ -1.44
ZC3H4Q9UPT8 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC6.08□□□□□ -1.44
ZC3H4Q9UPT8 OR2AQ1P-201ENST00000451972 200 ntBASIC6.08□□□□□ -1.44
ZC3H4Q9UPT8 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC6.08□□□□□ -1.44
ZC3H4Q9UPT8 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC6.08□□□□□ -1.44
ZC3H4Q9UPT8 SCARNA22-201ENST00000503991 125 ntBASIC6.08□□□□□ -1.44
ZC3H4Q9UPT8 SNORA40.15-201ENST00000516884 107 ntBASIC6.08□□□□□ -1.44
ZC3H4Q9UPT8 IGKV2D-36-201ENST00000518643 226 ntBASIC6.08□□□□□ -1.44
ZC3H4Q9UPT8 AC103783.1-201ENST00000520506 373 ntBASIC6.08□□□□□ -1.44
ZC3H4Q9UPT8 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC6.08□□□□□ -1.44
ZC3H4Q9UPT8 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.08□□□□□ -1.44
ZC3H4Q9UPT8 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC6.08□□□□□ -1.44
ZC3H4Q9UPT8 AC138965.3-201ENST00000623875 498 ntBASIC6.08□□□□□ -1.44
ZC3H4Q9UPT8 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC6.08□□□□□ -1.44
ZC3H4Q9UPT8 AL596275.2-204ENST00000641628 552 ntBASIC6.08□□□□□ -1.44
ZC3H4Q9UPT8 AL596275.2-206ENST00000641957 626 ntBASIC6.08□□□□□ -1.44
ZC3H4Q9UPT8 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms