Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.84□□□□□ -2.12
CCDC88CQ9P219 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
CCDC88CQ9P219 AC114878.1-201ENST00000441166 358 ntBASIC1.84□□□□□ -2.12
CCDC88CQ9P219 AC004865.1-201ENST00000442276 1003 ntBASIC1.84□□□□□ -2.12
CCDC88CQ9P219 MTND1P33-201ENST00000446251 917 ntBASIC1.84□□□□□ -2.12
CCDC88CQ9P219 WASF1P1-201ENST00000447560 1131 ntBASIC1.84□□□□□ -2.12
CCDC88CQ9P219 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.84□□□□□ -2.12
CCDC88CQ9P219 FABP5P13-201ENST00000452144 328 ntBASIC1.84□□□□□ -2.12
CCDC88CQ9P219 AC108210.2-201ENST00000503681 201 ntBASIC1.84□□□□□ -2.12
CCDC88CQ9P219 AC104108.1-201ENST00000509930 412 ntBASIC1.84□□□□□ -2.12
CCDC88CQ9P219 MTCO3P44-201ENST00000510977 541 ntBASIC1.84□□□□□ -2.12
CCDC88CQ9P219 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.84□□□□□ -2.12
CCDC88CQ9P219 RNU6-27P-201ENST00000516146 107 ntBASIC1.84□□□□□ -2.12
CCDC88CQ9P219 RN7SKP40-201ENST00000517211 242 ntBASIC1.84□□□□□ -2.12
CCDC88CQ9P219 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.84□□□□□ -2.12
CCDC88CQ9P219 ERHP1-201ENST00000523006 310 ntBASIC1.84□□□□□ -2.12
CCDC88CQ9P219 AC007115.1-201ENST00000546853 234 ntBASIC1.84□□□□□ -2.12
CCDC88CQ9P219 EEF1B2P4-201ENST00000551398 348 ntBASIC1.84□□□□□ -2.12
CCDC88CQ9P219 AC120053.1-201ENST00000607706 736 ntBASIC1.84□□□□□ -2.12
CCDC88CQ9P219 AC013562.2-201ENST00000611632 603 ntBASIC1.84□□□□□ -2.12
CCDC88CQ9P219 MIR6895-201ENST00000613497 78 ntBASIC1.84□□□□□ -2.12
CCDC88CQ9P219 MTCO1P18-201ENST00000455518 1419 ntBASIC1.84□□□□□ -2.12
CCDC88CQ9P219 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.12
CCDC88CQ9P219 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.84□□□□□ -2.12
CCDC88CQ9P219 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CCDC88CQ9P219 ENSAP3-201ENST00000312710 333 ntBASIC1.83□□□□□ -2.12
CCDC88CQ9P219 SNORA67.1-201ENST00000364749 141 ntBASIC1.83□□□□□ -2.12
CCDC88CQ9P219 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.83□□□□□ -2.12
CCDC88CQ9P219 TRIM60P5Y-201ENST00000413946 574 ntBASIC1.83□□□□□ -2.12
CCDC88CQ9P219 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC1.83□□□□□ -2.12
CCDC88CQ9P219 AC114973.1-201ENST00000429057 632 ntBASIC1.83□□□□□ -2.12
CCDC88CQ9P219 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC1.83□□□□□ -2.12
CCDC88CQ9P219 AC007677.1-201ENST00000445757 515 ntBASIC1.83□□□□□ -2.12
CCDC88CQ9P219 RN7SKP210-201ENST00000459176 261 ntBASIC1.83□□□□□ -2.12
CCDC88CQ9P219 RNU4ATAC10P-201ENST00000516967 122 ntBASIC1.83□□□□□ -2.12
CCDC88CQ9P219 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.83□□□□□ -2.12
CCDC88CQ9P219 LINC00557-201ENST00000563184 1279 ntBASIC1.83□□□□□ -2.12
CCDC88CQ9P219 AC012254.4-201ENST00000588843 273 ntBASIC1.83□□□□□ -2.12
CCDC88CQ9P219 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.83□□□□□ -2.12
CCDC88CQ9P219 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC1.83□□□□□ -2.12
CCDC88CQ9P219 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.83□□□□□ -2.12
CCDC88CQ9P219 AL161734.1-201ENST00000609720 557 ntBASIC1.83□□□□□ -2.12
CCDC88CQ9P219 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.83□□□□□ -2.12
CCDC88CQ9P219 AC090116.1-201ENST00000615679 446 ntBASIC1.83□□□□□ -2.12
CCDC88CQ9P219 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC1.83□□□□□ -2.12
CCDC88CQ9P219 AC092881.1-201ENST00000638218 2733 ntBASIC1.83□□□□□ -2.12
CCDC88CQ9P219 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CCDC88CQ9P219 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.83□□□□□ -2.12
CCDC88CQ9P219 MTCO1P6-201ENST00000481192 1384 ntBASIC1.83□□□□□ -2.12
CCDC88CQ9P219 RN7SKP226-201ENST00000364912 300 ntBASIC1.83□□□□□ -2.12
CCDC88CQ9P219 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.83□□□□□ -2.12
CCDC88CQ9P219 MIR627-201ENST00000384979 97 ntBASIC1.83□□□□□ -2.12
CCDC88CQ9P219 HMGB3P2-201ENST00000411913 584 ntBASIC1.83□□□□□ -2.12
CCDC88CQ9P219 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.83□□□□□ -2.12
CCDC88CQ9P219 AL606495.1-201ENST00000422100 813 ntBASIC1.83□□□□□ -2.12
CCDC88CQ9P219 AC234781.2-201ENST00000426370 994 ntBASIC1.83□□□□□ -2.12
CCDC88CQ9P219 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.83□□□□□ -2.12
CCDC88CQ9P219 RPL23AP16-201ENST00000441715 421 ntBASIC1.83□□□□□ -2.12
CCDC88CQ9P219 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.83□□□□□ -2.12
CCDC88CQ9P219 GTF2IP12-201ENST00000456547 356 ntBASIC1.83□□□□□ -2.12
CCDC88CQ9P219 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.83□□□□□ -2.12
CCDC88CQ9P219 RPL23AP42-201ENST00000471152 471 ntBASIC1.83□□□□□ -2.12
CCDC88CQ9P219 MTAPP1-201ENST00000489154 819 ntBASIC1.83□□□□□ -2.12
CCDC88CQ9P219 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC1.83□□□□□ -2.12
CCDC88CQ9P219 HMGB1P1-201ENST00000522557 636 ntBASIC1.83□□□□□ -2.12
CCDC88CQ9P219 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.83□□□□□ -2.12
CCDC88CQ9P219 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CCDC88CQ9P219 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CCDC88CQ9P219 AL049838.1-201ENST00000563647 981 ntBASIC1.83□□□□□ -2.12
CCDC88CQ9P219 AC008739.2-201ENST00000597006 317 ntBASIC1.83□□□□□ -2.12
CCDC88CQ9P219 AC013468.1-201ENST00000608680 598 ntBASIC1.83□□□□□ -2.12
CCDC88CQ9P219 AC091834.1-201ENST00000614543 472 ntBASIC1.83□□□□□ -2.12
CCDC88CQ9P219 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CCDC88CQ9P219 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CCDC88CQ9P219 AC099654.7-201ENST00000635788 2127 ntBASIC1.82□□□□□ -2.12
CCDC88CQ9P219 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.82□□□□□ -2.12
CCDC88CQ9P219 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC1.82□□□□□ -2.12
CCDC88CQ9P219 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.82□□□□□ -2.12
CCDC88CQ9P219 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.82□□□□□ -2.12
CCDC88CQ9P219 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CCDC88CQ9P219 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
CCDC88CQ9P219 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.82□□□□□ -2.12
CCDC88CQ9P219 RPP40P1-201ENST00000426762 456 ntBASIC1.82□□□□□ -2.12
CCDC88CQ9P219 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.82□□□□□ -2.12
CCDC88CQ9P219 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CCDC88CQ9P219 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC1.82□□□□□ -2.12
CCDC88CQ9P219 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.82□□□□□ -2.12
CCDC88CQ9P219 AC092436.1-201ENST00000506450 503 ntBASIC1.82□□□□□ -2.12
CCDC88CQ9P219 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.82□□□□□ -2.12
CCDC88CQ9P219 OSBPL9P3-201ENST00000534523 595 ntBASIC1.82□□□□□ -2.12
CCDC88CQ9P219 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC1.82□□□□□ -2.12
CCDC88CQ9P219 AC087481.2-201ENST00000565492 330 ntBASIC1.82□□□□□ -2.12
CCDC88CQ9P219 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC1.82□□□□□ -2.12
CCDC88CQ9P219 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC1.82□□□□□ -2.12
CCDC88CQ9P219 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.82□□□□□ -2.12
CCDC88CQ9P219 AC093673.2-201ENST00000609674 331 ntBASIC1.82□□□□□ -2.12
CCDC88CQ9P219 AC096586.1-201ENST00000610267 561 ntBASIC1.82□□□□□ -2.12
CCDC88CQ9P219 AC106028.5-201ENST00000610332 395 ntBASIC1.82□□□□□ -2.12
CCDC88CQ9P219 AL353748.2-201ENST00000622148 471 ntBASIC1.82□□□□□ -2.12
CCDC88CQ9P219 AC092608.3-201ENST00000625017 386 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 146.6 ms