Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
CLN6Q9NWW5 AC007785.2-201ENST00000598627 1916 ntBASIC2.36□□□□□ -2.03
CLN6Q9NWW5 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.36□□□□□ -2.03
CLN6Q9NWW5 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
CLN6Q9NWW5 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CLN6Q9NWW5 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
CLN6Q9NWW5 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CLN6Q9NWW5 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CLN6Q9NWW5 NACA3P-201ENST00000359690 648 ntBASIC2.36□□□□□ -2.03
CLN6Q9NWW5 AC068533.2-201ENST00000411872 306 ntBASIC2.36□□□□□ -2.03
CLN6Q9NWW5 EEF1A1P41-201ENST00000414667 207 ntBASIC2.36□□□□□ -2.03
CLN6Q9NWW5 Z75741.2-201ENST00000417272 1167 ntBASIC2.36□□□□□ -2.03
CLN6Q9NWW5 USP9YP20-201ENST00000419224 558 ntBASIC2.36□□□□□ -2.03
CLN6Q9NWW5 AC092427.1-202ENST00000430569 476 ntBASIC2.36□□□□□ -2.03
CLN6Q9NWW5 AL139132.1-201ENST00000431587 344 ntBASIC2.36□□□□□ -2.03
CLN6Q9NWW5 AC011816.1-201ENST00000441346 546 ntBASIC2.36□□□□□ -2.03
CLN6Q9NWW5 BMI1P1-201ENST00000445879 941 ntBASIC2.36□□□□□ -2.03
CLN6Q9NWW5 DDX3P2-201ENST00000446138 111 ntBASIC2.36□□□□□ -2.03
CLN6Q9NWW5 ARPC3P5-201ENST00000448802 534 ntBASIC2.36□□□□□ -2.03
CLN6Q9NWW5 RPL18AP17-201ENST00000455326 198 ntBASIC2.36□□□□□ -2.03
CLN6Q9NWW5 RNU7-23P-201ENST00000459465 62 ntBASIC2.36□□□□□ -2.03
CLN6Q9NWW5 AC087588.1-201ENST00000462203 316 ntBASIC2.36□□□□□ -2.03
CLN6Q9NWW5 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.36□□□□□ -2.03
CLN6Q9NWW5 FAM172BP-201ENST00000487497 1089 ntBASIC2.36□□□□□ -2.03
CLN6Q9NWW5 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.36□□□□□ -2.03
CLN6Q9NWW5 CDC42P4-201ENST00000510507 563 ntBASIC2.36□□□□□ -2.03
CLN6Q9NWW5 AC010374.2-201ENST00000512933 535 ntBASIC2.36□□□□□ -2.03
CLN6Q9NWW5 SNORA31.15-201ENST00000516771 132 ntBASIC2.36□□□□□ -2.03
CLN6Q9NWW5 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.36□□□□□ -2.03
CLN6Q9NWW5 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.36□□□□□ -2.03
CLN6Q9NWW5 AC007954.1-201ENST00000554198 494 ntBASIC2.36□□□□□ -2.03
CLN6Q9NWW5 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.36□□□□□ -2.03
CLN6Q9NWW5 BBIP1P1-201ENST00000602999 279 ntBASIC2.36□□□□□ -2.03
CLN6Q9NWW5 AC068313.1-201ENST00000604028 1008 ntBASIC2.36□□□□□ -2.03
CLN6Q9NWW5 AC140725.3-201ENST00000616193 880 ntBASIC2.36□□□□□ -2.03
CLN6Q9NWW5 MIR4275-201ENST00000636486 87 ntBASIC2.36□□□□□ -2.03
CLN6Q9NWW5 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.36□□□□□ -2.03
CLN6Q9NWW5 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CLN6Q9NWW5 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CLN6Q9NWW5 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
CLN6Q9NWW5 AL022578.1-201ENST00000439330 1433 ntBASIC2.35□□□□□ -2.03
CLN6Q9NWW5 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.35□□□□□ -2.03
CLN6Q9NWW5 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.35□□□□□ -2.03
CLN6Q9NWW5 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CLN6Q9NWW5 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
CLN6Q9NWW5 U8.8-201ENST00000365399 135 ntBASIC2.35□□□□□ -2.03
CLN6Q9NWW5 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.35□□□□□ -2.03
CLN6Q9NWW5 SET-203ENST00000372688 801 ntTSL 2 BASIC2.35□□□□□ -2.03
CLN6Q9NWW5 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
CLN6Q9NWW5 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
CLN6Q9NWW5 RNA5SP21-201ENST00000410917 96 ntBASIC2.35□□□□□ -2.03
CLN6Q9NWW5 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC2.35□□□□□ -2.03
CLN6Q9NWW5 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.35□□□□□ -2.03
CLN6Q9NWW5 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.35□□□□□ -2.03
CLN6Q9NWW5 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.35□□□□□ -2.03
CLN6Q9NWW5 RNU7-136P-201ENST00000458819 69 ntBASIC2.35□□□□□ -2.03
CLN6Q9NWW5 RNA5SP402-201ENST00000517148 110 ntBASIC2.35□□□□□ -2.03
CLN6Q9NWW5 RNU6-840P-201ENST00000517275 65 ntBASIC2.35□□□□□ -2.03
CLN6Q9NWW5 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.35□□□□□ -2.03
CLN6Q9NWW5 CKS1BP7-201ENST00000522230 235 ntBASIC2.35□□□□□ -2.03
CLN6Q9NWW5 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.35□□□□□ -2.03
CLN6Q9NWW5 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.35□□□□□ -2.03
CLN6Q9NWW5 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.35□□□□□ -2.03
CLN6Q9NWW5 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CLN6Q9NWW5 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CLN6Q9NWW5 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.35□□□□□ -2.03
CLN6Q9NWW5 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CLN6Q9NWW5 AC010546.1-201ENST00000569391 485 ntBASIC2.35□□□□□ -2.03
CLN6Q9NWW5 AC103810.1-201ENST00000579873 453 ntBASIC2.35□□□□□ -2.03
CLN6Q9NWW5 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.35□□□□□ -2.03
CLN6Q9NWW5 MIR4444-1-201ENST00000581696 74 ntBASIC2.35□□□□□ -2.03
CLN6Q9NWW5 MIR4444-2-201ENST00000584390 74 ntBASIC2.35□□□□□ -2.03
CLN6Q9NWW5 ATP5A1P2-202ENST00000616464 443 ntBASIC2.35□□□□□ -2.03
CLN6Q9NWW5 AL357080.1-201ENST00000617394 239 ntBASIC2.35□□□□□ -2.03
CLN6Q9NWW5 MIR6075-201ENST00000620782 95 ntBASIC2.35□□□□□ -2.03
CLN6Q9NWW5 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.35□□□□□ -2.03
CLN6Q9NWW5 OR1S1-201ENST00000624470 978 ntBASIC2.35□□□□□ -2.03
CLN6Q9NWW5 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.35□□□□□ -2.03
CLN6Q9NWW5 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.35□□□□□ -2.03
CLN6Q9NWW5 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.34□□□□□ -2.03
CLN6Q9NWW5 AL079343.1-201ENST00000572358 1771 ntBASIC2.34□□□□□ -2.03
CLN6Q9NWW5 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CLN6Q9NWW5 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CLN6Q9NWW5 RNU5E-8P-201ENST00000363502 116 ntBASIC2.34□□□□□ -2.03
CLN6Q9NWW5 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CLN6Q9NWW5 Y_RNA.408-201ENST00000383987 102 ntBASIC2.34□□□□□ -2.03
CLN6Q9NWW5 Y_RNA.548-201ENST00000384656 105 ntBASIC2.34□□□□□ -2.03
CLN6Q9NWW5 SNORA40.4-201ENST00000390971 128 ntBASIC2.34□□□□□ -2.03
CLN6Q9NWW5 AL590084.1-201ENST00000407885 387 ntBASIC2.34□□□□□ -2.03
CLN6Q9NWW5 RPL35AP12-201ENST00000425362 338 ntBASIC2.34□□□□□ -2.03
CLN6Q9NWW5 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.34□□□□□ -2.03
CLN6Q9NWW5 GTF2IP3-201ENST00000433887 494 ntBASIC2.34□□□□□ -2.03
CLN6Q9NWW5 AL358232.1-201ENST00000448030 501 ntBASIC2.34□□□□□ -2.03
CLN6Q9NWW5 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.34□□□□□ -2.03
CLN6Q9NWW5 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC2.34□□□□□ -2.03
CLN6Q9NWW5 BX322784.1-201ENST00000455793 1077 ntBASIC2.34□□□□□ -2.03
CLN6Q9NWW5 BX510359.1-201ENST00000456973 237 ntBASIC2.34□□□□□ -2.03
CLN6Q9NWW5 AC097493.1-201ENST00000463958 372 ntBASIC2.34□□□□□ -2.03
CLN6Q9NWW5 RPL31P41-201ENST00000477967 372 ntBASIC2.34□□□□□ -2.03
CLN6Q9NWW5 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms