Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 snoU109.4-201ENST00000458953 143 ntBASIC2.06□□□□□ -2.08
CISHQ9NSE2 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.06□□□□□ -2.08
CISHQ9NSE2 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC2.06□□□□□ -2.08
CISHQ9NSE2 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.06□□□□□ -2.08
CISHQ9NSE2 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.06□□□□□ -2.08
CISHQ9NSE2 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.06□□□□□ -2.08
CISHQ9NSE2 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.06□□□□□ -2.08
CISHQ9NSE2 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
CISHQ9NSE2 RANP3-201ENST00000530970 276 ntBASIC2.06□□□□□ -2.08
CISHQ9NSE2 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.06□□□□□ -2.08
CISHQ9NSE2 MYL12BP1-201ENST00000569826 507 ntBASIC2.06□□□□□ -2.08
CISHQ9NSE2 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
CISHQ9NSE2 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.06□□□□□ -2.08
CISHQ9NSE2 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CISHQ9NSE2 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CISHQ9NSE2 MTND5P11-201ENST00000511037 1812 ntBASIC2.05□□□□□ -2.08
CISHQ9NSE2 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.05□□□□□ -2.08
CISHQ9NSE2 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CISHQ9NSE2 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CISHQ9NSE2 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.05□□□□□ -2.08
CISHQ9NSE2 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CISHQ9NSE2 RNU2-20P-201ENST00000410425 191 ntBASIC2.05□□□□□ -2.08
CISHQ9NSE2 OR51A3P-201ENST00000413596 924 ntBASIC2.05□□□□□ -2.08
CISHQ9NSE2 EIF1AXP1-201ENST00000419267 435 ntBASIC2.05□□□□□ -2.08
CISHQ9NSE2 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.05□□□□□ -2.08
CISHQ9NSE2 MTND4P24-201ENST00000424002 397 ntBASIC2.05□□□□□ -2.08
CISHQ9NSE2 OR4K11P-201ENST00000431829 904 ntBASIC2.05□□□□□ -2.08
CISHQ9NSE2 AL445687.1-201ENST00000439946 251 ntBASIC2.05□□□□□ -2.08
CISHQ9NSE2 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.05□□□□□ -2.08
CISHQ9NSE2 FABP5P13-201ENST00000452144 328 ntBASIC2.05□□□□□ -2.08
CISHQ9NSE2 RPL31P41-201ENST00000477967 372 ntBASIC2.05□□□□□ -2.08
CISHQ9NSE2 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.05□□□□□ -2.08
CISHQ9NSE2 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.05□□□□□ -2.08
CISHQ9NSE2 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.05□□□□□ -2.08
CISHQ9NSE2 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.05□□□□□ -2.08
CISHQ9NSE2 EEF1B2P4-201ENST00000551398 348 ntBASIC2.05□□□□□ -2.08
CISHQ9NSE2 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CISHQ9NSE2 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC2.05□□□□□ -2.08
CISHQ9NSE2 ACTR3BP3-201ENST00000565577 979 ntBASIC2.05□□□□□ -2.08
CISHQ9NSE2 AC011890.2-201ENST00000613393 294 ntBASIC2.05□□□□□ -2.08
CISHQ9NSE2 MIR6895-201ENST00000613497 78 ntBASIC2.05□□□□□ -2.08
CISHQ9NSE2 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.05□□□□□ -2.08
CISHQ9NSE2 AC040168.1-201ENST00000623594 991 ntBASIC2.05□□□□□ -2.08
CISHQ9NSE2 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CISHQ9NSE2 RN7SKP226-201ENST00000364912 300 ntBASIC2.04□□□□□ -2.08
CISHQ9NSE2 AC009237.2-201ENST00000421358 284 ntBASIC2.04□□□□□ -2.08
CISHQ9NSE2 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.04□□□□□ -2.08
CISHQ9NSE2 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.04□□□□□ -2.08
CISHQ9NSE2 RPL27AP8-201ENST00000424277 446 ntBASIC2.04□□□□□ -2.08
CISHQ9NSE2 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.04□□□□□ -2.08
CISHQ9NSE2 PNPLA4P1-201ENST00000458328 305 ntBASIC2.04□□□□□ -2.08
CISHQ9NSE2 CABYRP1-201ENST00000465493 1045 ntBASIC2.04□□□□□ -2.08
CISHQ9NSE2 UBL5P3-201ENST00000475112 231 ntBASIC2.04□□□□□ -2.08
CISHQ9NSE2 FAM172BP-201ENST00000487497 1089 ntBASIC2.04□□□□□ -2.08
CISHQ9NSE2 AC023424.2-201ENST00000493479 777 ntBASIC2.04□□□□□ -2.08
CISHQ9NSE2 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.04□□□□□ -2.08
CISHQ9NSE2 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.04□□□□□ -2.08
CISHQ9NSE2 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CISHQ9NSE2 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.04□□□□□ -2.08
CISHQ9NSE2 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC2.04□□□□□ -2.08
CISHQ9NSE2 TRAV11-201ENST00000539512 339 ntBASIC2.04□□□□□ -2.08
CISHQ9NSE2 GLYCAM1-201ENST00000546596 285 ntBASIC2.04□□□□□ -2.08
CISHQ9NSE2 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC2.04□□□□□ -2.08
CISHQ9NSE2 AC025918.2-201ENST00000558683 763 ntBASIC2.04□□□□□ -2.08
CISHQ9NSE2 AC027807.1-201ENST00000559921 996 ntBASIC2.04□□□□□ -2.08
CISHQ9NSE2 AC090888.1-201ENST00000561335 1141 ntBASIC2.04□□□□□ -2.08
CISHQ9NSE2 ISCA1P3-201ENST00000577104 373 ntBASIC2.04□□□□□ -2.08
CISHQ9NSE2 AC010738.1-201ENST00000604970 987 ntBASIC2.04□□□□□ -2.08
CISHQ9NSE2 AC025588.4-201ENST00000615802 908 ntBASIC2.04□□□□□ -2.08
CISHQ9NSE2 UCA1.1-201ENST00000620952 75 ntBASIC2.04□□□□□ -2.08
CISHQ9NSE2 AP006248.3-201ENST00000623580 594 ntBASIC2.04□□□□□ -2.08
CISHQ9NSE2 AC098679.5-201ENST00000624394 571 ntBASIC2.04□□□□□ -2.08
CISHQ9NSE2 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.03□□□□□ -2.08
CISHQ9NSE2 CR848007.1-201ENST00000442354 1699 ntBASIC2.03□□□□□ -2.08
CISHQ9NSE2 MTND4P1-201ENST00000457501 1466 ntBASIC2.03□□□□□ -2.08
CISHQ9NSE2 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CISHQ9NSE2 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CISHQ9NSE2 RNU6-77P-201ENST00000410554 91 ntBASIC2.03□□□□□ -2.08
CISHQ9NSE2 VN1R51P-201ENST00000411675 945 ntBASIC2.03□□□□□ -2.08
CISHQ9NSE2 HMGB3P2-201ENST00000411913 584 ntBASIC2.03□□□□□ -2.08
CISHQ9NSE2 NPM1P11-201ENST00000417106 855 ntBASIC2.03□□□□□ -2.08
CISHQ9NSE2 AC244453.4-201ENST00000419150 388 ntBASIC2.03□□□□□ -2.08
CISHQ9NSE2 MTND4LP14-201ENST00000429447 288 ntBASIC2.03□□□□□ -2.08
CISHQ9NSE2 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.03□□□□□ -2.08
CISHQ9NSE2 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.03□□□□□ -2.08
CISHQ9NSE2 AC233279.1-201ENST00000455300 423 ntBASIC2.03□□□□□ -2.08
CISHQ9NSE2 AC092798.1-201ENST00000458542 409 ntBASIC2.03□□□□□ -2.08
CISHQ9NSE2 PABPC1P3-201ENST00000469174 459 ntBASIC2.03□□□□□ -2.08
CISHQ9NSE2 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.03□□□□□ -2.08
CISHQ9NSE2 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.03□□□□□ -2.08
CISHQ9NSE2 RNU6-1095P-201ENST00000516148 108 ntBASIC2.03□□□□□ -2.08
CISHQ9NSE2 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.03□□□□□ -2.08
CISHQ9NSE2 SUB1P1-201ENST00000524415 382 ntBASIC2.03□□□□□ -2.08
CISHQ9NSE2 CASP1P1-201ENST00000526345 212 ntBASIC2.03□□□□□ -2.08
CISHQ9NSE2 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.03□□□□□ -2.08
CISHQ9NSE2 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CISHQ9NSE2 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.03□□□□□ -2.08
CISHQ9NSE2 TRAV28-201ENST00000557548 323 ntBASIC2.03□□□□□ -2.08
CISHQ9NSE2 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.03□□□□□ -2.08
CISHQ9NSE2 VN1R78P-201ENST00000597393 564 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms