Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 AC116533.1-201ENST00000459748 321 ntBASIC4.49□□□□□ -1.69
TRIM39Q9HCM9 AC092451.1-201ENST00000480211 153 ntBASIC4.49□□□□□ -1.69
TRIM39Q9HCM9 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.49□□□□□ -1.69
TRIM39Q9HCM9 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.49□□□□□ -1.69
TRIM39Q9HCM9 Y_RNA.689-201ENST00000516589 107 ntBASIC4.49□□□□□ -1.69
TRIM39Q9HCM9 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.49□□□□□ -1.69
TRIM39Q9HCM9 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.49□□□□□ -1.69
TRIM39Q9HCM9 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM39Q9HCM9 SNRPGP16-201ENST00000533275 226 ntBASIC4.49□□□□□ -1.69
TRIM39Q9HCM9 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.49□□□□□ -1.69
TRIM39Q9HCM9 AL121576.1-201ENST00000556055 276 ntBASIC4.49□□□□□ -1.69
TRIM39Q9HCM9 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.49□□□□□ -1.69
TRIM39Q9HCM9 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.49□□□□□ -1.69
TRIM39Q9HCM9 MIR4715-201ENST00000584117 79 ntBASIC4.49□□□□□ -1.69
TRIM39Q9HCM9 AC007619.2-201ENST00000605743 379 ntBASIC4.49□□□□□ -1.69
TRIM39Q9HCM9 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.49□□□□□ -1.69
TRIM39Q9HCM9 AC092807.2-201ENST00000609367 243 ntBASIC4.49□□□□□ -1.69
TRIM39Q9HCM9 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
TRIM39Q9HCM9 MIR7641-1-201ENST00000627518 61 ntBASIC4.49□□□□□ -1.69
TRIM39Q9HCM9 TPTEP1-208ENST00000636884 213 ntBASIC4.49□□□□□ -1.69
TRIM39Q9HCM9 AC112487.2-201ENST00000637950 304 ntBASIC4.49□□□□□ -1.69
TRIM39Q9HCM9 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM39Q9HCM9 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.49□□□□□ -1.69
TRIM39Q9HCM9 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.49□□□□□ -1.69
TRIM39Q9HCM9 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM39Q9HCM9 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM39Q9HCM9 MFSD8-242ENST00000641690 4199 ntBASIC4.48□□□□□ -1.69
TRIM39Q9HCM9 RAD17P1-201ENST00000418130 2042 ntBASIC4.48□□□□□ -1.69
TRIM39Q9HCM9 MIR659-201ENST00000384963 97 ntBASIC4.48□□□□□ -1.69
TRIM39Q9HCM9 UBE2V1P2-201ENST00000397758 440 ntBASIC4.48□□□□□ -1.69
TRIM39Q9HCM9 MIR921-201ENST00000401133 56 ntBASIC4.48□□□□□ -1.69
TRIM39Q9HCM9 MIR1290-201ENST00000408735 78 ntBASIC4.48□□□□□ -1.69
TRIM39Q9HCM9 RN7SKP140-201ENST00000411196 284 ntBASIC4.48□□□□□ -1.69
TRIM39Q9HCM9 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.48□□□□□ -1.69
TRIM39Q9HCM9 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.48□□□□□ -1.69
TRIM39Q9HCM9 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM39Q9HCM9 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.48□□□□□ -1.69
TRIM39Q9HCM9 AL591704.1-201ENST00000432574 275 ntBASIC4.48□□□□□ -1.69
TRIM39Q9HCM9 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM39Q9HCM9 AC104058.1-201ENST00000448028 297 ntBASIC4.48□□□□□ -1.69
TRIM39Q9HCM9 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.48□□□□□ -1.69
TRIM39Q9HCM9 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.48□□□□□ -1.69
TRIM39Q9HCM9 HMGB1P22-201ENST00000505315 124 ntBASIC4.48□□□□□ -1.69
TRIM39Q9HCM9 RNU4-49P-201ENST00000516080 140 ntBASIC4.48□□□□□ -1.69
TRIM39Q9HCM9 Vault.1-201ENST00000516474 102 ntBASIC4.48□□□□□ -1.69
TRIM39Q9HCM9 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM39Q9HCM9 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.48□□□□□ -1.69
TRIM39Q9HCM9 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM39Q9HCM9 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM39Q9HCM9 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM39Q9HCM9 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.48□□□□□ -1.69
TRIM39Q9HCM9 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM39Q9HCM9 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM39Q9HCM9 MIR3921-201ENST00000577308 85 ntBASIC4.48□□□□□ -1.69
TRIM39Q9HCM9 MIR4742-201ENST00000581069 85 ntBASIC4.48□□□□□ -1.69
TRIM39Q9HCM9 AC068790.4-201ENST00000602474 263 ntBASIC4.48□□□□□ -1.69
TRIM39Q9HCM9 RMST_7.1-201ENST00000621935 268 ntBASIC4.48□□□□□ -1.69
TRIM39Q9HCM9 MTND5P42-201ENST00000637720 498 ntBASIC4.48□□□□□ -1.69
TRIM39Q9HCM9 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM39Q9HCM9 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM39Q9HCM9 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM39Q9HCM9 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.48□□□□□ -1.69
TRIM39Q9HCM9 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
TRIM39Q9HCM9 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM39Q9HCM9 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.48□□□□□ -1.69
TRIM39Q9HCM9 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.47□□□□□ -1.69
TRIM39Q9HCM9 CPHL1P-201ENST00000461341 3407 ntBASIC4.47□□□□□ -1.69
TRIM39Q9HCM9 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.47□□□□□ -1.69
TRIM39Q9HCM9 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
TRIM39Q9HCM9 AC018529.3-201ENST00000624212 2254 ntBASIC4.47□□□□□ -1.69
TRIM39Q9HCM9 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM39Q9HCM9 AC139713.2-214ENST00000642059 1811 ntBASIC4.47□□□□□ -1.69
TRIM39Q9HCM9 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM39Q9HCM9 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.47□□□□□ -1.69
TRIM39Q9HCM9 RNA5SP443-201ENST00000363083 132 ntBASIC4.47□□□□□ -1.69
TRIM39Q9HCM9 RNU1-32P-201ENST00000363937 159 ntBASIC4.47□□□□□ -1.69
TRIM39Q9HCM9 AL513331.1-201ENST00000411908 397 ntBASIC4.47□□□□□ -1.69
TRIM39Q9HCM9 AL451054.2-201ENST00000420896 202 ntBASIC4.47□□□□□ -1.69
TRIM39Q9HCM9 AL353678.1-201ENST00000422735 741 ntBASIC4.47□□□□□ -1.69
TRIM39Q9HCM9 RPL7AP25-201ENST00000423357 805 ntBASIC4.47□□□□□ -1.69
TRIM39Q9HCM9 AL591212.2-201ENST00000433923 257 ntBASIC4.47□□□□□ -1.69
TRIM39Q9HCM9 H2AFZP6-201ENST00000444403 394 ntBASIC4.47□□□□□ -1.69
TRIM39Q9HCM9 AL121877.1-201ENST00000453704 622 ntBASIC4.47□□□□□ -1.69
TRIM39Q9HCM9 PPP1R2P5-201ENST00000457256 603 ntBASIC4.47□□□□□ -1.69
TRIM39Q9HCM9 SCARNA18-201ENST00000459004 134 ntBASIC4.47□□□□□ -1.69
TRIM39Q9HCM9 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.47□□□□□ -1.69
TRIM39Q9HCM9 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM39Q9HCM9 FAM206BP-201ENST00000510179 541 ntBASIC4.47□□□□□ -1.69
TRIM39Q9HCM9 AL359273.1-201ENST00000510918 627 ntBASIC4.47□□□□□ -1.69
TRIM39Q9HCM9 SNORA31.3-201ENST00000516029 96 ntBASIC4.47□□□□□ -1.69
TRIM39Q9HCM9 AC105029.1-201ENST00000520250 669 ntBASIC4.47□□□□□ -1.69
TRIM39Q9HCM9 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.47□□□□□ -1.69
TRIM39Q9HCM9 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.47□□□□□ -1.69
TRIM39Q9HCM9 AC005951.2-201ENST00000576282 495 ntBASIC4.47□□□□□ -1.69
TRIM39Q9HCM9 MIR5096-201ENST00000583713 70 ntBASIC4.47□□□□□ -1.69
TRIM39Q9HCM9 AC091178.1-203ENST00000584586 279 ntBASIC4.47□□□□□ -1.69
TRIM39Q9HCM9 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.47□□□□□ -1.69
TRIM39Q9HCM9 BPIFA4P-203ENST00000603168 689 ntBASIC4.47□□□□□ -1.69
TRIM39Q9HCM9 DPPA3P3-201ENST00000603842 430 ntBASIC4.47□□□□□ -1.69
TRIM39Q9HCM9 AL592436.1-201ENST00000605135 558 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms