Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.05□□□□□ -1.92
VIPAS39Q9H9C1 GOT2P5-201ENST00000433995 546 ntBASIC3.05□□□□□ -1.92
VIPAS39Q9H9C1 AC090774.1-201ENST00000435925 246 ntBASIC3.05□□□□□ -1.92
VIPAS39Q9H9C1 LARP1BP3-201ENST00000437229 869 ntBASIC3.05□□□□□ -1.92
VIPAS39Q9H9C1 AC092641.1-201ENST00000440229 772 ntBASIC3.05□□□□□ -1.92
VIPAS39Q9H9C1 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.05□□□□□ -1.92
VIPAS39Q9H9C1 RPL7P36-201ENST00000444633 681 ntBASIC3.05□□□□□ -1.92
VIPAS39Q9H9C1 AL592447.1-201ENST00000447592 540 ntBASIC3.05□□□□□ -1.92
VIPAS39Q9H9C1 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.05□□□□□ -1.92
VIPAS39Q9H9C1 ZNF114P1-201ENST00000453500 292 ntBASIC3.05□□□□□ -1.92
VIPAS39Q9H9C1 AP000705.1-201ENST00000454567 350 ntBASIC3.05□□□□□ -1.92
VIPAS39Q9H9C1 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.05□□□□□ -1.92
VIPAS39Q9H9C1 RPL31P60-201ENST00000478450 367 ntBASIC3.05□□□□□ -1.92
VIPAS39Q9H9C1 AC090525.1-201ENST00000479116 478 ntBASIC3.05□□□□□ -1.92
VIPAS39Q9H9C1 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.05□□□□□ -1.92
VIPAS39Q9H9C1 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.05□□□□□ -1.92
VIPAS39Q9H9C1 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.05□□□□□ -1.92
VIPAS39Q9H9C1 AC116347.2-201ENST00000514912 523 ntBASIC3.05□□□□□ -1.92
VIPAS39Q9H9C1 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.05□□□□□ -1.92
VIPAS39Q9H9C1 SNORA70.16-201ENST00000516390 95 ntBASIC3.05□□□□□ -1.92
VIPAS39Q9H9C1 RNU6-232P-201ENST00000517144 64 ntBASIC3.05□□□□□ -1.92
VIPAS39Q9H9C1 MTATP6P15-201ENST00000527233 835 ntBASIC3.05□□□□□ -1.92
VIPAS39Q9H9C1 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.05□□□□□ -1.92
VIPAS39Q9H9C1 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
VIPAS39Q9H9C1 AC007954.1-201ENST00000554198 494 ntBASIC3.05□□□□□ -1.92
VIPAS39Q9H9C1 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.05□□□□□ -1.92
VIPAS39Q9H9C1 AC002400.1-201ENST00000569310 726 ntBASIC3.05□□□□□ -1.92
VIPAS39Q9H9C1 AC090616.2-202ENST00000584248 222 ntBASIC3.05□□□□□ -1.92
VIPAS39Q9H9C1 AL133393.1-201ENST00000603277 287 ntBASIC3.05□□□□□ -1.92
VIPAS39Q9H9C1 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.05□□□□□ -1.92
VIPAS39Q9H9C1 AC008147.4-201ENST00000617570 1204 ntBASIC3.05□□□□□ -1.92
VIPAS39Q9H9C1 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.05□□□□□ -1.92
VIPAS39Q9H9C1 AP003485.2-201ENST00000623636 610 ntBASIC3.05□□□□□ -1.92
VIPAS39Q9H9C1 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.05□□□□□ -1.92
VIPAS39Q9H9C1 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.05□□□□□ -1.92
VIPAS39Q9H9C1 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.05□□□□□ -1.92
VIPAS39Q9H9C1 AC006378.2-201ENST00000623178 2476 ntBASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 AC012321.1-201ENST00000561622 1588 ntBASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 RNU5E-8P-201ENST00000363502 116 ntBASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 SNORA25.6-201ENST00000364121 118 ntBASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 RNU6-637P-201ENST00000384050 107 ntBASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 SNORD15B-201ENST00000384714 146 ntBASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 MIR1305-201ENST00000408300 86 ntBASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 RPL21P40-201ENST00000428586 483 ntBASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 ST13P20-201ENST00000447996 1065 ntBASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 RPL7P15-201ENST00000461190 712 ntBASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 BZW1P2-201ENST00000473537 826 ntBASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 AC022483.1-201ENST00000514020 567 ntBASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 SNORA9.3-201ENST00000516383 129 ntBASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 SNORA31.22-201ENST00000517204 135 ntBASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 AP001804.3-201ENST00000525146 880 ntBASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 CCNG2P1-201ENST00000549521 1000 ntBASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 AC109446.2-201ENST00000567872 497 ntBASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 AC011260.1-201ENST00000578420 472 ntBASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 MTCYBP22-201ENST00000603788 447 ntBASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 PRELID3BP8-201ENST00000604148 295 ntBASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 AC091965.4-201ENST00000607691 587 ntBASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 MIR622-201ENST00000638396 96 ntBASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
VIPAS39Q9H9C1 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
VIPAS39Q9H9C1 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
VIPAS39Q9H9C1 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
VIPAS39Q9H9C1 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.03□□□□□ -1.92
VIPAS39Q9H9C1 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
VIPAS39Q9H9C1 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.03□□□□□ -1.92
VIPAS39Q9H9C1 RNA5SP479-201ENST00000364858 117 ntBASIC3.03□□□□□ -1.92
VIPAS39Q9H9C1 RNU6-76P-201ENST00000384060 104 ntBASIC3.03□□□□□ -1.92
VIPAS39Q9H9C1 U8.14-201ENST00000390843 143 ntBASIC3.03□□□□□ -1.92
VIPAS39Q9H9C1 RNU1-101P-201ENST00000391171 127 ntBASIC3.03□□□□□ -1.92
VIPAS39Q9H9C1 RPL21P17-201ENST00000397467 475 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms