Protein–RNA interactions for Protein: Q9H741

C12orf49, UPF0454 protein C12orf49, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49Q9H741 AC126177.5-201ENST00000549599 178 ntBASIC4.8□□□□□ -1.64
C12orf49Q9H741 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.8□□□□□ -1.64
C12orf49Q9H741 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.8□□□□□ -1.64
C12orf49Q9H741 SUB1P3-201ENST00000564581 315 ntBASIC4.8□□□□□ -1.64
C12orf49Q9H741 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
C12orf49Q9H741 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.8□□□□□ -1.64
C12orf49Q9H741 AC119674.1-207ENST00000641355 633 ntBASIC4.8□□□□□ -1.64
C12orf49Q9H741 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
C12orf49Q9H741 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
C12orf49Q9H741 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
C12orf49Q9H741 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
C12orf49Q9H741 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
C12orf49Q9H741 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
C12orf49Q9H741 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
C12orf49Q9H741 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
C12orf49Q9H741 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
C12orf49Q9H741 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
C12orf49Q9H741 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
C12orf49Q9H741 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.79□□□□□ -1.64
C12orf49Q9H741 SMG1P4-204ENST00000523028 4131 ntBASIC4.79□□□□□ -1.64
C12orf49Q9H741 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.79□□□□□ -1.64
C12orf49Q9H741 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.79□□□□□ -1.64
C12orf49Q9H741 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
C12orf49Q9H741 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
C12orf49Q9H741 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
C12orf49Q9H741 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
C12orf49Q9H741 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
C12orf49Q9H741 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.79□□□□□ -1.64
C12orf49Q9H741 SNORA31-201ENST00000362607 130 ntBASIC4.79□□□□□ -1.64
C12orf49Q9H741 Y_RNA.176-201ENST00000363815 109 ntBASIC4.79□□□□□ -1.64
C12orf49Q9H741 RNU6-741P-201ENST00000383889 107 ntBASIC4.79□□□□□ -1.64
C12orf49Q9H741 Y_RNA.389-201ENST00000383924 113 ntBASIC4.79□□□□□ -1.64
C12orf49Q9H741 MIR105-1-201ENST00000385222 81 ntBASIC4.79□□□□□ -1.64
C12orf49Q9H741 HMGB3P2-201ENST00000411913 584 ntBASIC4.79□□□□□ -1.64
C12orf49Q9H741 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.79□□□□□ -1.64
C12orf49Q9H741 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
C12orf49Q9H741 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
C12orf49Q9H741 RPL21P66-201ENST00000426566 466 ntBASIC4.79□□□□□ -1.64
C12orf49Q9H741 AC068287.1-201ENST00000430283 295 ntBASIC4.79□□□□□ -1.64
C12orf49Q9H741 RPS11P7-201ENST00000442125 465 ntBASIC4.79□□□□□ -1.64
C12orf49Q9H741 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.79□□□□□ -1.64
C12orf49Q9H741 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC4.79□□□□□ -1.64
C12orf49Q9H741 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.79□□□□□ -1.64
C12orf49Q9H741 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC4.79□□□□□ -1.64
C12orf49Q9H741 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.79□□□□□ -1.64
C12orf49Q9H741 AP002404.1-201ENST00000532005 451 ntBASIC4.79□□□□□ -1.64
C12orf49Q9H741 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.79□□□□□ -1.64
C12orf49Q9H741 RPL10P14-201ENST00000565265 298 ntBASIC4.79□□□□□ -1.64
C12orf49Q9H741 MIR4273-201ENST00000582824 84 ntBASIC4.79□□□□□ -1.64
C12orf49Q9H741 OR7E18P-201ENST00000592589 702 ntBASIC4.79□□□□□ -1.64
C12orf49Q9H741 AL121917.1-203ENST00000605534 577 ntBASIC4.79□□□□□ -1.64
C12orf49Q9H741 LINC00901.1-201ENST00000617252 152 ntBASIC4.79□□□□□ -1.64
C12orf49Q9H741 AC109583.2-201ENST00000617367 129 ntBASIC4.79□□□□□ -1.64
C12orf49Q9H741 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.79□□□□□ -1.64
C12orf49Q9H741 AC000095.2-202ENST00000637415 154 ntBASIC4.79□□□□□ -1.64
C12orf49Q9H741 AC074101.1-201ENST00000637861 241 ntBASIC4.79□□□□□ -1.64
C12orf49Q9H741 AC079776.5-201ENST00000641920 211 ntBASIC4.79□□□□□ -1.64
C12orf49Q9H741 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
C12orf49Q9H741 AC140134.1-201ENST00000511830 3544 ntBASIC4.79□□□□□ -1.64
C12orf49Q9H741 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
C12orf49Q9H741 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
C12orf49Q9H741 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.79□□□□□ -1.64
C12orf49Q9H741 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.78□□□□□ -1.64
C12orf49Q9H741 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
C12orf49Q9H741 AC104260.2-201ENST00000623551 3497 ntBASIC4.78□□□□□ -1.64
C12orf49Q9H741 AC114774.1-201ENST00000507410 1770 ntBASIC4.78□□□□□ -1.64
C12orf49Q9H741 AC100778.3-201ENST00000580060 1750 ntBASIC4.78□□□□□ -1.64
C12orf49Q9H741 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
C12orf49Q9H741 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.78□□□□□ -1.64
C12orf49Q9H741 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.78□□□□□ -1.64
C12orf49Q9H741 Y_RNA.47-201ENST00000362697 108 ntBASIC4.78□□□□□ -1.64
C12orf49Q9H741 SNORA67-201ENST00000384423 137 ntBASIC4.78□□□□□ -1.64
C12orf49Q9H741 MIR223-201ENST00000385204 110 ntBASIC4.78□□□□□ -1.64
C12orf49Q9H741 RNA5SP339-201ENST00000390987 122 ntBASIC4.78□□□□□ -1.64
C12orf49Q9H741 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.78□□□□□ -1.64
C12orf49Q9H741 RNU2-33P-201ENST00000410344 192 ntBASIC4.78□□□□□ -1.64
C12orf49Q9H741 RNU6-174P-201ENST00000410406 106 ntBASIC4.78□□□□□ -1.64
C12orf49Q9H741 RNU2-23P-201ENST00000410545 195 ntBASIC4.78□□□□□ -1.64
C12orf49Q9H741 AL096701.2-201ENST00000416920 238 ntBASIC4.78□□□□□ -1.64
C12orf49Q9H741 BX276092.3-201ENST00000424182 230 ntBASIC4.78□□□□□ -1.64
C12orf49Q9H741 AL163193.1-201ENST00000444895 788 ntBASIC4.78□□□□□ -1.64
C12orf49Q9H741 RNU6-1037P-201ENST00000459571 107 ntBASIC4.78□□□□□ -1.64
C12orf49Q9H741 RN7SL172P-201ENST00000460535 303 ntBASIC4.78□□□□□ -1.64
C12orf49Q9H741 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC4.78□□□□□ -1.64
C12orf49Q9H741 RNU6-475P-201ENST00000516073 104 ntBASIC4.78□□□□□ -1.64
C12orf49Q9H741 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.78□□□□□ -1.64
C12orf49Q9H741 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.78□□□□□ -1.64
C12orf49Q9H741 TRAV32-201ENST00000553993 340 ntBASIC4.78□□□□□ -1.64
C12orf49Q9H741 AC113195.1-201ENST00000579952 141 ntBASIC4.78□□□□□ -1.64
C12orf49Q9H741 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC4.78□□□□□ -1.64
C12orf49Q9H741 AP000787.2-201ENST00000604432 568 ntBASIC4.78□□□□□ -1.64
C12orf49Q9H741 AC126915.2-201ENST00000610957 190 ntBASIC4.78□□□□□ -1.64
C12orf49Q9H741 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.78□□□□□ -1.64
C12orf49Q9H741 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.78□□□□□ -1.64
C12orf49Q9H741 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
C12orf49Q9H741 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
C12orf49Q9H741 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.78□□□□□ -1.64
C12orf49Q9H741 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
C12orf49Q9H741 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.78□□□□□ -1.64
C12orf49Q9H741 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms