Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AL353898.1-201ENST00000444055 238 ntBASIC2.28□□□□□ -2.04
SCAPERQ9BY12 AC008526.1-201ENST00000509149 338 ntBASIC2.28□□□□□ -2.04
SCAPERQ9BY12 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.28□□□□□ -2.04
SCAPERQ9BY12 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.28□□□□□ -2.04
SCAPERQ9BY12 MIR514B-201ENST00000516774 80 ntBASIC2.28□□□□□ -2.04
SCAPERQ9BY12 AL138976.2-201ENST00000563989 694 ntBASIC2.28□□□□□ -2.04
SCAPERQ9BY12 OR4K8P-201ENST00000578842 1048 ntBASIC2.28□□□□□ -2.04
SCAPERQ9BY12 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
SCAPERQ9BY12 AC136443.5-201ENST00000603741 370 ntBASIC2.28□□□□□ -2.04
SCAPERQ9BY12 AC034236.3-201ENST00000605999 461 ntBASIC2.28□□□□□ -2.04
SCAPERQ9BY12 AC006065.5-201ENST00000623427 349 ntBASIC2.28□□□□□ -2.04
SCAPERQ9BY12 OR4G1P-203ENST00000641984 1631 ntBASIC2.28□□□□□ -2.04
SCAPERQ9BY12 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.27□□□□□ -2.05
SCAPERQ9BY12 RNU6-234P-201ENST00000365229 104 ntBASIC2.27□□□□□ -2.05
SCAPERQ9BY12 PIGFP3-201ENST00000441918 722 ntBASIC2.27□□□□□ -2.05
SCAPERQ9BY12 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.27□□□□□ -2.05
SCAPERQ9BY12 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.27□□□□□ -2.05
SCAPERQ9BY12 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.27□□□□□ -2.05
SCAPERQ9BY12 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.27□□□□□ -2.05
SCAPERQ9BY12 AP003072.4-201ENST00000624580 310 ntBASIC2.27□□□□□ -2.05
SCAPERQ9BY12 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
SCAPERQ9BY12 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SCAPERQ9BY12 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.26□□□□□ -2.05
SCAPERQ9BY12 RPL23AP29-201ENST00000397284 453 ntBASIC2.26□□□□□ -2.05
SCAPERQ9BY12 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.26□□□□□ -2.05
SCAPERQ9BY12 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.26□□□□□ -2.05
SCAPERQ9BY12 AC055855.1-201ENST00000489563 579 ntBASIC2.26□□□□□ -2.05
SCAPERQ9BY12 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.26□□□□□ -2.05
SCAPERQ9BY12 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.26□□□□□ -2.05
SCAPERQ9BY12 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.26□□□□□ -2.05
SCAPERQ9BY12 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC2.26□□□□□ -2.05
SCAPERQ9BY12 RN7SL622P-201ENST00000585292 275 ntBASIC2.26□□□□□ -2.05
SCAPERQ9BY12 AC138915.1-201ENST00000565427 1685 ntBASIC2.26□□□□□ -2.05
SCAPERQ9BY12 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
SCAPERQ9BY12 MIR524-201ENST00000385242 87 ntBASIC2.25□□□□□ -2.05
SCAPERQ9BY12 SSR1P1-201ENST00000407630 814 ntBASIC2.25□□□□□ -2.05
SCAPERQ9BY12 AL354695.1-201ENST00000427935 228 ntBASIC2.25□□□□□ -2.05
SCAPERQ9BY12 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
SCAPERQ9BY12 AC069277.2-201ENST00000454211 432 ntBASIC2.25□□□□□ -2.05
SCAPERQ9BY12 HMGN2P16-201ENST00000456802 261 ntBASIC2.25□□□□□ -2.05
SCAPERQ9BY12 RPS27P21-201ENST00000486977 252 ntBASIC2.25□□□□□ -2.05
SCAPERQ9BY12 MTCO3P44-201ENST00000510977 541 ntBASIC2.25□□□□□ -2.05
SCAPERQ9BY12 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.25□□□□□ -2.05
SCAPERQ9BY12 MIR3690-201ENST00000580266 75 ntBASIC2.25□□□□□ -2.05
SCAPERQ9BY12 AC106028.5-201ENST00000610332 395 ntBASIC2.25□□□□□ -2.05
SCAPERQ9BY12 uc_338.12-201ENST00000616344 181 ntBASIC2.25□□□□□ -2.05
SCAPERQ9BY12 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.25□□□□□ -2.05
SCAPERQ9BY12 IPO7P1-201ENST00000442031 636 ntBASIC2.25□□□□□ -2.05
SCAPERQ9BY12 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.25□□□□□ -2.05
SCAPERQ9BY12 MIR3122-201ENST00000577243 73 ntBASIC2.25□□□□□ -2.05
SCAPERQ9BY12 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.25□□□□□ -2.05
SCAPERQ9BY12 AC008568.2-201ENST00000623862 2313 ntBASIC2.24□□□□□ -2.05
SCAPERQ9BY12 AL354685.2-201ENST00000448218 1447 ntBASIC2.24□□□□□ -2.05
SCAPERQ9BY12 OR4G11P-202ENST00000642116 1414 ntBASIC2.24□□□□□ -2.05
SCAPERQ9BY12 RNU6-1331P-201ENST00000363658 106 ntBASIC2.24□□□□□ -2.05
SCAPERQ9BY12 CD24P4-201ENST00000382840 243 ntBASIC2.24□□□□□ -2.05
SCAPERQ9BY12 RNU6-1-201ENST00000383898 107 ntBASIC2.24□□□□□ -2.05
SCAPERQ9BY12 RNU6-42P-201ENST00000384165 107 ntBASIC2.24□□□□□ -2.05
SCAPERQ9BY12 RNU6-36P-201ENST00000384172 107 ntBASIC2.24□□□□□ -2.05
SCAPERQ9BY12 RNU6-4P-201ENST00000384205 107 ntBASIC2.24□□□□□ -2.05
SCAPERQ9BY12 RNU6-5P-201ENST00000384238 107 ntBASIC2.24□□□□□ -2.05
SCAPERQ9BY12 RNU6-3P-201ENST00000384314 107 ntBASIC2.24□□□□□ -2.05
SCAPERQ9BY12 RNU6-2-201ENST00000384627 107 ntBASIC2.24□□□□□ -2.05
SCAPERQ9BY12 RNU6-9-201ENST00000384776 107 ntBASIC2.24□□□□□ -2.05
SCAPERQ9BY12 RNU6-33P-201ENST00000384793 107 ntBASIC2.24□□□□□ -2.05
SCAPERQ9BY12 MIR607-201ENST00000385241 96 ntBASIC2.24□□□□□ -2.05
SCAPERQ9BY12 RPS23P3-201ENST00000470993 430 ntBASIC2.24□□□□□ -2.05
SCAPERQ9BY12 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.24□□□□□ -2.05
SCAPERQ9BY12 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC2.24□□□□□ -2.05
SCAPERQ9BY12 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.24□□□□□ -2.05
SCAPERQ9BY12 RNU6-6P-201ENST00000606623 107 ntBASIC2.24□□□□□ -2.05
SCAPERQ9BY12 AC145207.9-201ENST00000623802 325 ntBASIC2.24□□□□□ -2.05
SCAPERQ9BY12 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SCAPERQ9BY12 AL034374.1-201ENST00000406329 351 ntBASIC2.23□□□□□ -2.05
SCAPERQ9BY12 HMGB1P45-201ENST00000435986 653 ntBASIC2.23□□□□□ -2.05
SCAPERQ9BY12 SDCBPP1-201ENST00000440192 890 ntBASIC2.23□□□□□ -2.05
SCAPERQ9BY12 AL136380.1-201ENST00000447970 162 ntBASIC2.23□□□□□ -2.05
SCAPERQ9BY12 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.23□□□□□ -2.05
SCAPERQ9BY12 CDC42P4-201ENST00000510507 563 ntBASIC2.23□□□□□ -2.05
SCAPERQ9BY12 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.23□□□□□ -2.05
SCAPERQ9BY12 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.23□□□□□ -2.05
SCAPERQ9BY12 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.23□□□□□ -2.05
SCAPERQ9BY12 AC006023.2-201ENST00000609916 167 ntBASIC2.23□□□□□ -2.05
SCAPERQ9BY12 AC022709.1-201ENST00000615967 87 ntBASIC2.23□□□□□ -2.05
SCAPERQ9BY12 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.23□□□□□ -2.05
SCAPERQ9BY12 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
SCAPERQ9BY12 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.23□□□□□ -2.05
SCAPERQ9BY12 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.23□□□□□ -2.05
SCAPERQ9BY12 DEFB109C-201ENST00000382575 264 ntBASIC2.22□□□□□ -2.05
SCAPERQ9BY12 DEFB109B-201ENST00000382656 264 ntBASIC2.22□□□□□ -2.05
SCAPERQ9BY12 UBE2V1P5-201ENST00000440070 405 ntBASIC2.22□□□□□ -2.05
SCAPERQ9BY12 RPL23AP41-201ENST00000484754 458 ntBASIC2.22□□□□□ -2.05
SCAPERQ9BY12 RNU2-44P-201ENST00000516795 194 ntBASIC2.22□□□□□ -2.05
SCAPERQ9BY12 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.22□□□□□ -2.05
SCAPERQ9BY12 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.22□□□□□ -2.05
SCAPERQ9BY12 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.22□□□□□ -2.05
SCAPERQ9BY12 AC008015.1-201ENST00000555505 465 ntBASIC2.22□□□□□ -2.05
SCAPERQ9BY12 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.22□□□□□ -2.05
SCAPERQ9BY12 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.22□□□□□ -2.05
SCAPERQ9BY12 AC135776.4-201ENST00000624300 1904 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms