Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC5.37□□□□□ -1.55
COL25A1Q9BXS0 MIR5696-201ENST00000578474 85 ntBASIC5.37□□□□□ -1.55
COL25A1Q9BXS0 AC098826.3-201ENST00000603823 466 ntBASIC5.37□□□□□ -1.55
COL25A1Q9BXS0 AC012468.1-201ENST00000604888 430 ntBASIC5.37□□□□□ -1.55
COL25A1Q9BXS0 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.37□□□□□ -1.55
COL25A1Q9BXS0 AL445647.2-201ENST00000615170 130 ntBASIC5.37□□□□□ -1.55
COL25A1Q9BXS0 HSP90AA4P-202ENST00000506915 2228 ntBASIC5.37□□□□□ -1.55
COL25A1Q9BXS0 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC5.37□□□□□ -1.55
COL25A1Q9BXS0 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
COL25A1Q9BXS0 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
COL25A1Q9BXS0 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL25A1Q9BXS0 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC5.37□□□□□ -1.55
COL25A1Q9BXS0 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.37□□□□□ -1.55
COL25A1Q9BXS0 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL25A1Q9BXS0 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL25A1Q9BXS0 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.37□□□□□ -1.55
COL25A1Q9BXS0 AL079305.1-201ENST00000623159 3008 ntBASIC5.37□□□□□ -1.55
COL25A1Q9BXS0 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC5.36□□□□□ -1.55
COL25A1Q9BXS0 AC107021.2-201ENST00000567714 2095 ntBASIC5.36□□□□□ -1.55
COL25A1Q9BXS0 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
COL25A1Q9BXS0 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC5.36□□□□□ -1.55
COL25A1Q9BXS0 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL25A1Q9BXS0 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
COL25A1Q9BXS0 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
COL25A1Q9BXS0 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.36□□□□□ -1.55
COL25A1Q9BXS0 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL25A1Q9BXS0 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL25A1Q9BXS0 RNU6-449P-201ENST00000383914 107 ntBASIC5.36□□□□□ -1.55
COL25A1Q9BXS0 RNU6-937P-201ENST00000384325 106 ntBASIC5.36□□□□□ -1.55
COL25A1Q9BXS0 Y_RNA.590-201ENST00000410140 107 ntBASIC5.36□□□□□ -1.55
COL25A1Q9BXS0 RNU2-61P-201ENST00000411069 191 ntBASIC5.36□□□□□ -1.55
COL25A1Q9BXS0 AC007161.1-204ENST00000423039 460 ntBASIC5.36□□□□□ -1.55
COL25A1Q9BXS0 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC5.36□□□□□ -1.55
COL25A1Q9BXS0 MTCO1P39-201ENST00000426148 480 ntBASIC5.36□□□□□ -1.55
COL25A1Q9BXS0 H3F3BP1-201ENST00000440551 403 ntBASIC5.36□□□□□ -1.55
COL25A1Q9BXS0 RPS17P13-201ENST00000448974 407 ntBASIC5.36□□□□□ -1.55
COL25A1Q9BXS0 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL25A1Q9BXS0 Y_RNA.638-201ENST00000459374 113 ntBASIC5.36□□□□□ -1.55
COL25A1Q9BXS0 RPL30P1-201ENST00000488676 339 ntBASIC5.36□□□□□ -1.55
COL25A1Q9BXS0 SNORA31.9-201ENST00000516429 84 ntBASIC5.36□□□□□ -1.55
COL25A1Q9BXS0 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC5.36□□□□□ -1.55
COL25A1Q9BXS0 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.36□□□□□ -1.55
COL25A1Q9BXS0 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.36□□□□□ -1.55
COL25A1Q9BXS0 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.36□□□□□ -1.55
COL25A1Q9BXS0 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.36□□□□□ -1.55
COL25A1Q9BXS0 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL25A1Q9BXS0 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL25A1Q9BXS0 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL25A1Q9BXS0 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL25A1Q9BXS0 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC5.36□□□□□ -1.55
COL25A1Q9BXS0 AC093849.1-201ENST00000563631 2209 ntBASIC5.36□□□□□ -1.55
COL25A1Q9BXS0 SMG1P7-201ENST00000565246 2704 ntBASIC5.36□□□□□ -1.55
COL25A1Q9BXS0 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
COL25A1Q9BXS0 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.36□□□□□ -1.55
COL25A1Q9BXS0 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL25A1Q9BXS0 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL25A1Q9BXS0 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
COL25A1Q9BXS0 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL25A1Q9BXS0 CDC27P2-201ENST00000425026 1922 ntBASIC5.35□□□□□ -1.55
COL25A1Q9BXS0 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL25A1Q9BXS0 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.35□□□□□ -1.55
COL25A1Q9BXS0 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
COL25A1Q9BXS0 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
COL25A1Q9BXS0 RNY3P4-201ENST00000384428 101 ntBASIC5.35□□□□□ -1.55
COL25A1Q9BXS0 RPL21P75-201ENST00000396599 483 ntBASIC5.35□□□□□ -1.55
COL25A1Q9BXS0 RPL21P28-201ENST00000401418 483 ntBASIC5.35□□□□□ -1.55
COL25A1Q9BXS0 AL513475.1-201ENST00000406602 315 ntBASIC5.35□□□□□ -1.55
COL25A1Q9BXS0 RNA5SP494-201ENST00000410653 129 ntBASIC5.35□□□□□ -1.55
COL25A1Q9BXS0 DPPA2P2-201ENST00000418220 897 ntBASIC5.35□□□□□ -1.55
COL25A1Q9BXS0 AL590556.1-201ENST00000423231 483 ntBASIC5.35□□□□□ -1.55
COL25A1Q9BXS0 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC5.35□□□□□ -1.55
COL25A1Q9BXS0 RPL21P11-201ENST00000461458 483 ntBASIC5.35□□□□□ -1.55
COL25A1Q9BXS0 RPL21P39-201ENST00000463605 483 ntBASIC5.35□□□□□ -1.55
COL25A1Q9BXS0 RPL37P6-202ENST00000464216 403 ntBASIC5.35□□□□□ -1.55
COL25A1Q9BXS0 RN7SL319P-201ENST00000480656 221 ntBASIC5.35□□□□□ -1.55
COL25A1Q9BXS0 AC132942.1-201ENST00000486753 483 ntBASIC5.35□□□□□ -1.55
COL25A1Q9BXS0 AC010409.1-201ENST00000487382 476 ntBASIC5.35□□□□□ -1.55
COL25A1Q9BXS0 AC093591.1-201ENST00000491435 481 ntBASIC5.35□□□□□ -1.55
COL25A1Q9BXS0 RPL21P16-201ENST00000495531 483 ntBASIC5.35□□□□□ -1.55
COL25A1Q9BXS0 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC5.35□□□□□ -1.55
COL25A1Q9BXS0 RNU6-1333P-201ENST00000516162 93 ntBASIC5.35□□□□□ -1.55
COL25A1Q9BXS0 Y_RNA.679-201ENST00000516416 91 ntBASIC5.35□□□□□ -1.55
COL25A1Q9BXS0 AC073581.1-201ENST00000519036 575 ntBASIC5.35□□□□□ -1.55
COL25A1Q9BXS0 AC007458.1-201ENST00000542812 373 ntBASIC5.35□□□□□ -1.55
COL25A1Q9BXS0 MDM2-232ENST00000544561 213 ntTSL 5 BASIC5.35□□□□□ -1.55
COL25A1Q9BXS0 H3F3AP1-201ENST00000559984 334 ntBASIC5.35□□□□□ -1.55
COL25A1Q9BXS0 MIR4308-201ENST00000580634 81 ntBASIC5.35□□□□□ -1.55
COL25A1Q9BXS0 MIR3200-201ENST00000580767 85 ntBASIC5.35□□□□□ -1.55
COL25A1Q9BXS0 AL450472.3-201ENST00000615578 367 ntBASIC5.35□□□□□ -1.55
COL25A1Q9BXS0 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.35□□□□□ -1.55
COL25A1Q9BXS0 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL25A1Q9BXS0 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL25A1Q9BXS0 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.35□□□□□ -1.55
COL25A1Q9BXS0 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
COL25A1Q9BXS0 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL25A1Q9BXS0 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL25A1Q9BXS0 AC092692.1-201ENST00000623625 2595 ntBASIC5.35□□□□□ -1.55
COL25A1Q9BXS0 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.35□□□□□ -1.55
COL25A1Q9BXS0 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL25A1Q9BXS0 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms