Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 RNA5SP165-201ENST00000517142 115 ntBASIC5.43□□□□□ -1.54
TRAIPQ9BWF2 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC5.43□□□□□ -1.54
TRAIPQ9BWF2 AP003122.3-201ENST00000526316 255 ntBASIC5.43□□□□□ -1.54
TRAIPQ9BWF2 AC084851.1-201ENST00000529105 249 ntBASIC5.43□□□□□ -1.54
TRAIPQ9BWF2 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.43□□□□□ -1.54
TRAIPQ9BWF2 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC5.43□□□□□ -1.54
TRAIPQ9BWF2 MIR4270-201ENST00000581799 70 ntBASIC5.43□□□□□ -1.54
TRAIPQ9BWF2 MIR4795-201ENST00000584182 89 ntBASIC5.43□□□□□ -1.54
TRAIPQ9BWF2 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.43□□□□□ -1.54
TRAIPQ9BWF2 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC5.43□□□□□ -1.54
TRAIPQ9BWF2 AL161616.1-201ENST00000611867 286 ntBASIC5.43□□□□□ -1.54
TRAIPQ9BWF2 UBE2Q2P6-201ENST00000612666 153 ntBASIC5.43□□□□□ -1.54
TRAIPQ9BWF2 AL031601.2-202ENST00000622650 282 ntBASIC5.43□□□□□ -1.54
TRAIPQ9BWF2 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.43□□□□□ -1.54
TRAIPQ9BWF2 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC5.43□□□□□ -1.54
TRAIPQ9BWF2 CUL1P1-201ENST00000509510 2425 ntBASIC5.43□□□□□ -1.54
TRAIPQ9BWF2 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRAIPQ9BWF2 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
TRAIPQ9BWF2 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC5.42□□□□□ -1.54
TRAIPQ9BWF2 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
TRAIPQ9BWF2 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.42□□□□□ -1.54
TRAIPQ9BWF2 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.42□□□□□ -1.54
TRAIPQ9BWF2 Y_RNA.167-201ENST00000363735 109 ntBASIC5.42□□□□□ -1.54
TRAIPQ9BWF2 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRAIPQ9BWF2 FAR2P2-201ENST00000413041 594 ntBASIC5.42□□□□□ -1.54
TRAIPQ9BWF2 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC5.42□□□□□ -1.54
TRAIPQ9BWF2 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.42□□□□□ -1.54
TRAIPQ9BWF2 AC005019.1-201ENST00000436455 431 ntBASIC5.42□□□□□ -1.54
TRAIPQ9BWF2 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC5.42□□□□□ -1.54
TRAIPQ9BWF2 AC107399.1-201ENST00000451226 265 ntBASIC5.42□□□□□ -1.54
TRAIPQ9BWF2 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.42□□□□□ -1.54
TRAIPQ9BWF2 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC5.42□□□□□ -1.54
TRAIPQ9BWF2 OR7H2P-201ENST00000513483 306 ntBASIC5.42□□□□□ -1.54
TRAIPQ9BWF2 AC087854.1-201ENST00000519706 414 ntBASIC5.42□□□□□ -1.54
TRAIPQ9BWF2 AC012339.2-201ENST00000523996 453 ntBASIC5.42□□□□□ -1.54
TRAIPQ9BWF2 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC5.42□□□□□ -1.54
TRAIPQ9BWF2 BNIP3P1-201ENST00000547295 580 ntBASIC5.42□□□□□ -1.54
TRAIPQ9BWF2 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.42□□□□□ -1.54
TRAIPQ9BWF2 MIR4719-201ENST00000585233 84 ntBASIC5.42□□□□□ -1.54
TRAIPQ9BWF2 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.42□□□□□ -1.54
TRAIPQ9BWF2 AC020910.3-201ENST00000603701 874 ntBASIC5.42□□□□□ -1.54
TRAIPQ9BWF2 AC021646.1-201ENST00000605469 484 ntBASIC5.42□□□□□ -1.54
TRAIPQ9BWF2 uc_338.18-201ENST00000615451 175 ntBASIC5.42□□□□□ -1.54
TRAIPQ9BWF2 BX005214.3-202ENST00000619809 325 ntBASIC5.42□□□□□ -1.54
TRAIPQ9BWF2 AC099506.2-201ENST00000623074 221 ntBASIC5.42□□□□□ -1.54
TRAIPQ9BWF2 VPS8-228ENST00000628962 207 ntTSL 5 BASIC5.42□□□□□ -1.54
TRAIPQ9BWF2 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.42□□□□□ -1.54
TRAIPQ9BWF2 OR52H1-202ENST00000641796 1061 ntBASIC5.42□□□□□ -1.54
TRAIPQ9BWF2 AC073869.10-201ENST00000642016 354 ntBASIC5.42□□□□□ -1.54
TRAIPQ9BWF2 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.42□□□□□ -1.54
TRAIPQ9BWF2 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.42□□□□□ -1.54
TRAIPQ9BWF2 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.41□□□□□ -1.54
TRAIPQ9BWF2 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TRAIPQ9BWF2 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.41□□□□□ -1.54
TRAIPQ9BWF2 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TRAIPQ9BWF2 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TRAIPQ9BWF2 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.41□□□□□ -1.54
TRAIPQ9BWF2 MIR412-201ENST00000362142 91 ntBASIC5.41□□□□□ -1.54
TRAIPQ9BWF2 RNU1-108P-201ENST00000362556 161 ntBASIC5.41□□□□□ -1.54
TRAIPQ9BWF2 U3.42-201ENST00000408746 214 ntBASIC5.41□□□□□ -1.54
TRAIPQ9BWF2 RN7SKP16-201ENST00000410180 299 ntBASIC5.41□□□□□ -1.54
TRAIPQ9BWF2 AL450023.3-201ENST00000440592 271 ntBASIC5.41□□□□□ -1.54
TRAIPQ9BWF2 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.41□□□□□ -1.54
TRAIPQ9BWF2 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC5.41□□□□□ -1.54
TRAIPQ9BWF2 AURKAPS2-201ENST00000454983 333 ntBASIC5.41□□□□□ -1.54
TRAIPQ9BWF2 HMGN2P16-201ENST00000456802 261 ntBASIC5.41□□□□□ -1.54
TRAIPQ9BWF2 RNU7-66P-201ENST00000459469 62 ntBASIC5.41□□□□□ -1.54
TRAIPQ9BWF2 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.41□□□□□ -1.54
TRAIPQ9BWF2 Y_RNA.682-201ENST00000516457 100 ntBASIC5.41□□□□□ -1.54
TRAIPQ9BWF2 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.41□□□□□ -1.54
TRAIPQ9BWF2 NDUFB4P11-201ENST00000560510 395 ntBASIC5.41□□□□□ -1.54
TRAIPQ9BWF2 AC004805.2-201ENST00000605382 482 ntBASIC5.41□□□□□ -1.54
TRAIPQ9BWF2 AL110115.1-201ENST00000614396 364 ntBASIC5.41□□□□□ -1.54
TRAIPQ9BWF2 AC022140.2-201ENST00000623500 188 ntBASIC5.41□□□□□ -1.54
TRAIPQ9BWF2 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.41□□□□□ -1.54
TRAIPQ9BWF2 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.41□□□□□ -1.54
TRAIPQ9BWF2 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRAIPQ9BWF2 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRAIPQ9BWF2 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
TRAIPQ9BWF2 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.41□□□□□ -1.54
TRAIPQ9BWF2 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.41□□□□□ -1.54
TRAIPQ9BWF2 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRAIPQ9BWF2 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TRAIPQ9BWF2 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.41□□□□□ -1.54
TRAIPQ9BWF2 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
TRAIPQ9BWF2 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TRAIPQ9BWF2 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.4□□□□□ -1.54
TRAIPQ9BWF2 AL731532.2-201ENST00000623542 1953 ntBASIC5.4□□□□□ -1.54
TRAIPQ9BWF2 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TRAIPQ9BWF2 Y_RNA.184-201ENST00000363884 108 ntBASIC5.4□□□□□ -1.54
TRAIPQ9BWF2 RNU6-694P-201ENST00000364071 147 ntBASIC5.4□□□□□ -1.54
TRAIPQ9BWF2 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
TRAIPQ9BWF2 RNU6-128P-201ENST00000383976 107 ntBASIC5.4□□□□□ -1.54
TRAIPQ9BWF2 RNU6-214P-201ENST00000384130 107 ntBASIC5.4□□□□□ -1.54
TRAIPQ9BWF2 RNU6-140P-201ENST00000384566 108 ntBASIC5.4□□□□□ -1.54
TRAIPQ9BWF2 VN1R36P-201ENST00000414936 291 ntBASIC5.4□□□□□ -1.54
TRAIPQ9BWF2 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TRAIPQ9BWF2 SNRPEP9-201ENST00000436794 238 ntBASIC5.4□□□□□ -1.54
TRAIPQ9BWF2 ARL2BPP10-201ENST00000446487 531 ntBASIC5.4□□□□□ -1.54
TRAIPQ9BWF2 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms