Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HERPUD2Q9BSE4 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.87□□□□□ -1.79
HERPUD2Q9BSE4 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.87□□□□□ -1.79
HERPUD2Q9BSE4 RPL31P3-201ENST00000458430 332 ntBASIC3.87□□□□□ -1.79
HERPUD2Q9BSE4 RBM43P1-201ENST00000476891 1081 ntBASIC3.87□□□□□ -1.79
HERPUD2Q9BSE4 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.87□□□□□ -1.79
HERPUD2Q9BSE4 LARP1BP2-201ENST00000486594 519 ntBASIC3.87□□□□□ -1.79
HERPUD2Q9BSE4 AL160314.1-201ENST00000490836 438 ntBASIC3.87□□□□□ -1.79
HERPUD2Q9BSE4 PCBP2P3-201ENST00000509726 843 ntBASIC3.87□□□□□ -1.79
HERPUD2Q9BSE4 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.87□□□□□ -1.79
HERPUD2Q9BSE4 RNU6-927P-201ENST00000516199 100 ntBASIC3.87□□□□□ -1.79
HERPUD2Q9BSE4 RN7SKP258-201ENST00000517151 304 ntBASIC3.87□□□□□ -1.79
HERPUD2Q9BSE4 AP003122.4-201ENST00000530980 758 ntBASIC3.87□□□□□ -1.79
HERPUD2Q9BSE4 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HERPUD2Q9BSE4 CYCSP30-201ENST00000546447 172 ntBASIC3.87□□□□□ -1.79
HERPUD2Q9BSE4 AC011602.1-201ENST00000546484 331 ntBASIC3.87□□□□□ -1.79
HERPUD2Q9BSE4 AC005771.1-201ENST00000585581 349 ntBASIC3.87□□□□□ -1.79
HERPUD2Q9BSE4 DPPA3P3-201ENST00000603842 430 ntBASIC3.87□□□□□ -1.79
HERPUD2Q9BSE4 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.87□□□□□ -1.79
HERPUD2Q9BSE4 AL354798.1-201ENST00000622505 329 ntBASIC3.87□□□□□ -1.79
HERPUD2Q9BSE4 AL603839.4-201ENST00000624658 1005 ntBASIC3.87□□□□□ -1.79
HERPUD2Q9BSE4 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.87□□□□□ -1.79
HERPUD2Q9BSE4 AC244205.2-202ENST00000635781 342 ntBASIC3.87□□□□□ -1.79
HERPUD2Q9BSE4 AC099654.13-201ENST00000639774 207 ntBASIC3.87□□□□□ -1.79
HERPUD2Q9BSE4 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
HERPUD2Q9BSE4 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HERPUD2Q9BSE4 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HERPUD2Q9BSE4 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.87□□□□□ -1.79
HERPUD2Q9BSE4 AL161912.2-201ENST00000565707 3007 ntBASIC3.87□□□□□ -1.79
HERPUD2Q9BSE4 MFSD8-236ENST00000641509 4050 ntBASIC3.86□□□□□ -1.79
HERPUD2Q9BSE4 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HERPUD2Q9BSE4 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HERPUD2Q9BSE4 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.86□□□□□ -1.79
HERPUD2Q9BSE4 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HERPUD2Q9BSE4 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.86□□□□□ -1.79
HERPUD2Q9BSE4 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.86□□□□□ -1.79
HERPUD2Q9BSE4 GNG5P1-201ENST00000255500 204 ntBASIC3.86□□□□□ -1.79
HERPUD2Q9BSE4 RPL21P17-201ENST00000397467 475 ntBASIC3.86□□□□□ -1.79
HERPUD2Q9BSE4 NDUFS5P1-201ENST00000405668 289 ntBASIC3.86□□□□□ -1.79
HERPUD2Q9BSE4 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.86□□□□□ -1.79
HERPUD2Q9BSE4 RAC1P6-201ENST00000423911 575 ntBASIC3.86□□□□□ -1.79
HERPUD2Q9BSE4 AC012498.1-201ENST00000424037 437 ntBASIC3.86□□□□□ -1.79
HERPUD2Q9BSE4 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.86□□□□□ -1.79
HERPUD2Q9BSE4 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.86□□□□□ -1.79
HERPUD2Q9BSE4 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.86□□□□□ -1.79
HERPUD2Q9BSE4 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.86□□□□□ -1.79
HERPUD2Q9BSE4 RPS29P31-201ENST00000446147 164 ntBASIC3.86□□□□□ -1.79
HERPUD2Q9BSE4 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.86□□□□□ -1.79
HERPUD2Q9BSE4 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.86□□□□□ -1.79
HERPUD2Q9BSE4 AC080014.1-201ENST00000496877 1201 ntBASIC3.86□□□□□ -1.79
HERPUD2Q9BSE4 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HERPUD2Q9BSE4 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HERPUD2Q9BSE4 AC117532.1-201ENST00000514638 323 ntBASIC3.86□□□□□ -1.79
HERPUD2Q9BSE4 AP000867.2-201ENST00000532468 320 ntBASIC3.86□□□□□ -1.79
HERPUD2Q9BSE4 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.86□□□□□ -1.79
HERPUD2Q9BSE4 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.86□□□□□ -1.79
HERPUD2Q9BSE4 AC087499.8-201ENST00000578406 226 ntBASIC3.86□□□□□ -1.79
HERPUD2Q9BSE4 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.86□□□□□ -1.79
HERPUD2Q9BSE4 AC006130.2-201ENST00000586202 326 ntBASIC3.86□□□□□ -1.79
HERPUD2Q9BSE4 KLKP1-201ENST00000595979 403 ntBASIC3.86□□□□□ -1.79
HERPUD2Q9BSE4 AL670379.6-201ENST00000603753 252 ntBASIC3.86□□□□□ -1.79
HERPUD2Q9BSE4 AL670379.11-201ENST00000604059 253 ntBASIC3.86□□□□□ -1.79
HERPUD2Q9BSE4 AC008162.1-201ENST00000604718 254 ntBASIC3.86□□□□□ -1.79
HERPUD2Q9BSE4 AL670379.1-201ENST00000604752 252 ntBASIC3.86□□□□□ -1.79
HERPUD2Q9BSE4 AL670379.5-201ENST00000605253 252 ntBASIC3.86□□□□□ -1.79
HERPUD2Q9BSE4 AL670379.12-201ENST00000605291 253 ntBASIC3.86□□□□□ -1.79
HERPUD2Q9BSE4 AL670379.8-201ENST00000605353 252 ntBASIC3.86□□□□□ -1.79
HERPUD2Q9BSE4 AL670379.7-201ENST00000605823 252 ntBASIC3.86□□□□□ -1.79
HERPUD2Q9BSE4 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
HERPUD2Q9BSE4 MTND1P37-201ENST00000636562 264 ntBASIC3.86□□□□□ -1.79
HERPUD2Q9BSE4 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HERPUD2Q9BSE4 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.86□□□□□ -1.79
HERPUD2Q9BSE4 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HERPUD2Q9BSE4 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HERPUD2Q9BSE4 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HERPUD2Q9BSE4 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.85□□□□□ -1.79
HERPUD2Q9BSE4 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
HERPUD2Q9BSE4 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.85□□□□□ -1.79
HERPUD2Q9BSE4 RNU6-701P-201ENST00000384059 107 ntBASIC3.85□□□□□ -1.79
HERPUD2Q9BSE4 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HERPUD2Q9BSE4 RPL32P23-201ENST00000397237 405 ntBASIC3.85□□□□□ -1.79
HERPUD2Q9BSE4 AL354719.1-201ENST00000406535 843 ntBASIC3.85□□□□□ -1.79
HERPUD2Q9BSE4 RNU2-33P-201ENST00000410344 192 ntBASIC3.85□□□□□ -1.79
HERPUD2Q9BSE4 RN7SKP27-201ENST00000410684 333 ntBASIC3.85□□□□□ -1.79
HERPUD2Q9BSE4 CYCSP19-201ENST00000411715 316 ntBASIC3.85□□□□□ -1.79
HERPUD2Q9BSE4 SEPT2P1-201ENST00000419651 180 ntBASIC3.85□□□□□ -1.79
HERPUD2Q9BSE4 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.85□□□□□ -1.79
HERPUD2Q9BSE4 MTND6P13-201ENST00000443510 523 ntBASIC3.85□□□□□ -1.79
HERPUD2Q9BSE4 Z83846.1-201ENST00000446798 265 ntBASIC3.85□□□□□ -1.79
HERPUD2Q9BSE4 ST13P20-201ENST00000447996 1065 ntBASIC3.85□□□□□ -1.79
HERPUD2Q9BSE4 SNRPGP6-201ENST00000451124 220 ntBASIC3.85□□□□□ -1.79
HERPUD2Q9BSE4 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.85□□□□□ -1.79
HERPUD2Q9BSE4 AL031183.1-201ENST00000457667 207 ntBASIC3.85□□□□□ -1.79
HERPUD2Q9BSE4 AC013267.1-201ENST00000458227 267 ntBASIC3.85□□□□□ -1.79
HERPUD2Q9BSE4 MTCO2P29-201ENST00000465212 189 ntBASIC3.85□□□□□ -1.79
HERPUD2Q9BSE4 AL135752.1-201ENST00000479477 471 ntBASIC3.85□□□□□ -1.79
HERPUD2Q9BSE4 RN7SL432P-201ENST00000484057 298 ntBASIC3.85□□□□□ -1.79
HERPUD2Q9BSE4 RN7SL323P-201ENST00000494712 295 ntBASIC3.85□□□□□ -1.79
HERPUD2Q9BSE4 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.85□□□□□ -1.79
HERPUD2Q9BSE4 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms