Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
SSX3Q99909 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SSX3Q99909 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
SSX3Q99909 CR383658.2-201ENST00000547576 1525 ntBASIC2.95□□□□□ -1.94
SSX3Q99909 SNORA71.3-201ENST00000362582 128 ntBASIC2.95□□□□□ -1.94
SSX3Q99909 RNU6-223P-201ENST00000362830 107 ntBASIC2.95□□□□□ -1.94
SSX3Q99909 RNA5SP383-201ENST00000362934 120 ntBASIC2.95□□□□□ -1.94
SSX3Q99909 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
SSX3Q99909 ESD-201ENST00000378697 1079 ntTSL 5 BASIC2.95□□□□□ -1.94
SSX3Q99909 SNORD21-201ENST00000383953 95 ntBASIC2.95□□□□□ -1.94
SSX3Q99909 MIR218-2-201ENST00000385006 110 ntBASIC2.95□□□□□ -1.94
SSX3Q99909 U8.14-201ENST00000390843 143 ntBASIC2.95□□□□□ -1.94
SSX3Q99909 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SSX3Q99909 ATP5A1P2-201ENST00000412323 255 ntBASIC2.95□□□□□ -1.94
SSX3Q99909 UBE2FP1-201ENST00000416536 447 ntBASIC2.95□□□□□ -1.94
SSX3Q99909 SYF2P2-201ENST00000417620 583 ntBASIC2.95□□□□□ -1.94
SSX3Q99909 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.95□□□□□ -1.94
SSX3Q99909 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.95□□□□□ -1.94
SSX3Q99909 HMGN2P30-201ENST00000423237 256 ntBASIC2.95□□□□□ -1.94
SSX3Q99909 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC2.95□□□□□ -1.94
SSX3Q99909 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.95□□□□□ -1.94
SSX3Q99909 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.95□□□□□ -1.94
SSX3Q99909 UBE2D3P1-201ENST00000436669 444 ntBASIC2.95□□□□□ -1.94
SSX3Q99909 ARPC3P1-201ENST00000437218 533 ntBASIC2.95□□□□□ -1.94
SSX3Q99909 RNU7-125P-201ENST00000458760 62 ntBASIC2.95□□□□□ -1.94
SSX3Q99909 SNORD105B-201ENST00000458770 79 ntBASIC2.95□□□□□ -1.94
SSX3Q99909 RNU6-420P-201ENST00000458780 107 ntBASIC2.95□□□□□ -1.94
SSX3Q99909 AL135752.1-201ENST00000479477 471 ntBASIC2.95□□□□□ -1.94
SSX3Q99909 AC021205.2-201ENST00000480069 347 ntBASIC2.95□□□□□ -1.94
SSX3Q99909 AC020893.1-201ENST00000502452 580 ntBASIC2.95□□□□□ -1.94
SSX3Q99909 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.95□□□□□ -1.94
SSX3Q99909 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.95□□□□□ -1.94
SSX3Q99909 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.95□□□□□ -1.94
SSX3Q99909 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC2.95□□□□□ -1.94
SSX3Q99909 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.95□□□□□ -1.94
SSX3Q99909 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.95□□□□□ -1.94
SSX3Q99909 AC090888.1-201ENST00000561335 1141 ntBASIC2.95□□□□□ -1.94
SSX3Q99909 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.95□□□□□ -1.94
SSX3Q99909 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.95□□□□□ -1.94
SSX3Q99909 MIR4307-201ENST00000582802 84 ntBASIC2.95□□□□□ -1.94
SSX3Q99909 AC006116.10-201ENST00000591836 581 ntBASIC2.95□□□□□ -1.94
SSX3Q99909 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.95□□□□□ -1.94
SSX3Q99909 AC008739.2-201ENST00000597006 317 ntBASIC2.95□□□□□ -1.94
SSX3Q99909 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.95□□□□□ -1.94
SSX3Q99909 AC006557.5-201ENST00000603126 811 ntBASIC2.95□□□□□ -1.94
SSX3Q99909 AC024220.1-201ENST00000603675 484 ntBASIC2.95□□□□□ -1.94
SSX3Q99909 AC068313.1-201ENST00000604028 1008 ntBASIC2.95□□□□□ -1.94
SSX3Q99909 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.95□□□□□ -1.94
SSX3Q99909 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.95□□□□□ -1.94
SSX3Q99909 U3.45-201ENST00000607547 219 ntBASIC2.95□□□□□ -1.94
SSX3Q99909 AL360219.1-201ENST00000610230 366 ntBASIC2.95□□□□□ -1.94
SSX3Q99909 AC004223.4-201ENST00000612426 332 ntBASIC2.95□□□□□ -1.94
SSX3Q99909 AC093838.1-201ENST00000613014 469 ntBASIC2.95□□□□□ -1.94
SSX3Q99909 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.95□□□□□ -1.94
SSX3Q99909 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.95□□□□□ -1.94
SSX3Q99909 AC244100.1-202ENST00000621554 382 ntBASIC2.95□□□□□ -1.94
SSX3Q99909 AL356266.1-201ENST00000623311 483 ntBASIC2.95□□□□□ -1.94
SSX3Q99909 AC002064.3-201ENST00000623448 346 ntBASIC2.95□□□□□ -1.94
SSX3Q99909 AC073308.1-201ENST00000623696 305 ntBASIC2.95□□□□□ -1.94
SSX3Q99909 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC2.95□□□□□ -1.94
SSX3Q99909 AL392088.2-201ENST00000637607 285 ntBASIC2.95□□□□□ -1.94
SSX3Q99909 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SSX3Q99909 SDAD1P2-201ENST00000441308 2028 ntBASIC2.95□□□□□ -1.94
SSX3Q99909 AL138713.1-201ENST00000624026 2130 ntBASIC2.95□□□□□ -1.94
SSX3Q99909 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.95□□□□□ -1.94
SSX3Q99909 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
SSX3Q99909 CD36-221ENST00000534394 1741 ntTSL 2 BASIC2.94□□□□□ -1.94
SSX3Q99909 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
SSX3Q99909 MIR148B-201ENST00000362252 99 ntBASIC2.94□□□□□ -1.94
SSX3Q99909 RNU6-500P-201ENST00000362349 107 ntBASIC2.94□□□□□ -1.94
SSX3Q99909 RNA5SP119-201ENST00000362715 117 ntBASIC2.94□□□□□ -1.94
SSX3Q99909 RNY4P24-201ENST00000362735 96 ntBASIC2.94□□□□□ -1.94
SSX3Q99909 U8.9-201ENST00000365667 134 ntBASIC2.94□□□□□ -1.94
SSX3Q99909 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SSX3Q99909 RNA5SP107-201ENST00000411358 122 ntBASIC2.94□□□□□ -1.94
SSX3Q99909 SPA17P1-201ENST00000416656 452 ntBASIC2.94□□□□□ -1.94
SSX3Q99909 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC2.94□□□□□ -1.94
SSX3Q99909 HMGB3P20-201ENST00000417997 600 ntBASIC2.94□□□□□ -1.94
SSX3Q99909 AC245291.1-201ENST00000419501 328 ntBASIC2.94□□□□□ -1.94
SSX3Q99909 AL353678.1-201ENST00000422735 741 ntBASIC2.94□□□□□ -1.94
SSX3Q99909 RPS27AP14-201ENST00000422868 454 ntBASIC2.94□□□□□ -1.94
SSX3Q99909 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.94□□□□□ -1.94
SSX3Q99909 AC093151.1-201ENST00000427711 313 ntBASIC2.94□□□□□ -1.94
SSX3Q99909 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.94□□□□□ -1.94
SSX3Q99909 AL512649.1-201ENST00000428997 581 ntBASIC2.94□□□□□ -1.94
SSX3Q99909 AL158071.1-201ENST00000430315 461 ntBASIC2.94□□□□□ -1.94
SSX3Q99909 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.94□□□□□ -1.94
SSX3Q99909 SETP8-201ENST00000435341 628 ntBASIC2.94□□□□□ -1.94
SSX3Q99909 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC2.94□□□□□ -1.94
SSX3Q99909 AL162389.1-201ENST00000449233 177 ntBASIC2.94□□□□□ -1.94
SSX3Q99909 AC099563.1-201ENST00000456086 418 ntBASIC2.94□□□□□ -1.94
SSX3Q99909 RN7SL601P-201ENST00000471221 293 ntBASIC2.94□□□□□ -1.94
SSX3Q99909 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SSX3Q99909 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.94□□□□□ -1.94
SSX3Q99909 AC116347.2-201ENST00000514912 523 ntBASIC2.94□□□□□ -1.94
SSX3Q99909 SNORA31.21-201ENST00000517180 77 ntBASIC2.94□□□□□ -1.94
SSX3Q99909 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC2.94□□□□□ -1.94
SSX3Q99909 AP000907.2-201ENST00000530827 353 ntBASIC2.94□□□□□ -1.94
SSX3Q99909 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.94□□□□□ -1.94
SSX3Q99909 AC124947.2-202ENST00000552735 133 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms