Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 MTCO3P10-201ENST00000455912 772 ntBASIC4.46□□□□□ -1.7
CDK5RAP1Q96SZ6 Y_RNA.635-201ENST00000459041 101 ntBASIC4.46□□□□□ -1.7
CDK5RAP1Q96SZ6 AC010655.3-201ENST00000478818 450 ntBASIC4.46□□□□□ -1.7
CDK5RAP1Q96SZ6 RPL21P99-201ENST00000480369 423 ntBASIC4.46□□□□□ -1.7
CDK5RAP1Q96SZ6 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.46□□□□□ -1.7
CDK5RAP1Q96SZ6 FAM206BP-201ENST00000510179 541 ntBASIC4.46□□□□□ -1.7
CDK5RAP1Q96SZ6 TMEM248P1-201ENST00000510579 951 ntBASIC4.46□□□□□ -1.7
CDK5RAP1Q96SZ6 SNORA31.9-201ENST00000516429 84 ntBASIC4.46□□□□□ -1.7
CDK5RAP1Q96SZ6 RNA5SP337-201ENST00000517007 109 ntBASIC4.46□□□□□ -1.7
CDK5RAP1Q96SZ6 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.46□□□□□ -1.7
CDK5RAP1Q96SZ6 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.46□□□□□ -1.7
CDK5RAP1Q96SZ6 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.46□□□□□ -1.7
CDK5RAP1Q96SZ6 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.46□□□□□ -1.7
CDK5RAP1Q96SZ6 BNIP3P6-201ENST00000549284 499 ntBASIC4.46□□□□□ -1.7
CDK5RAP1Q96SZ6 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.46□□□□□ -1.7
CDK5RAP1Q96SZ6 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.46□□□□□ -1.7
CDK5RAP1Q96SZ6 AL354984.3-201ENST00000604803 325 ntBASIC4.46□□□□□ -1.7
CDK5RAP1Q96SZ6 AL365434.2-201ENST00000607979 234 ntBASIC4.46□□□□□ -1.7
CDK5RAP1Q96SZ6 AC007546.1-201ENST00000619452 559 ntBASIC4.46□□□□□ -1.7
CDK5RAP1Q96SZ6 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
CDK5RAP1Q96SZ6 AC067931.1-201ENST00000624190 671 ntBASIC4.46□□□□□ -1.7
CDK5RAP1Q96SZ6 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CDK5RAP1Q96SZ6 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.46□□□□□ -1.7
CDK5RAP1Q96SZ6 NOL8P1-201ENST00000508336 3529 ntBASIC4.46□□□□□ -1.7
CDK5RAP1Q96SZ6 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
CDK5RAP1Q96SZ6 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.46□□□□□ -1.7
CDK5RAP1Q96SZ6 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CDK5RAP1Q96SZ6 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.46□□□□□ -1.7
CDK5RAP1Q96SZ6 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 RNU6-1252P-201ENST00000363054 104 ntBASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 Y_RNA.188-201ENST00000363952 111 ntBASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 RNU6-522P-201ENST00000364497 107 ntBASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 RNU4-66P-201ENST00000365199 138 ntBASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 RNU6-317P-201ENST00000384031 107 ntBASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 Y_RNA.557-201ENST00000384680 107 ntBASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 RNA5SP36-201ENST00000410197 133 ntBASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 AL669831.1-202ENST00000428504 417 ntBASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 AC069285.2-201ENST00000440210 275 ntBASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 RPL23AP15-201ENST00000450202 459 ntBASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 CECR9-201ENST00000453421 199 ntBASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 TRBV1-201ENST00000476502 284 ntBASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 AC083904.1-201ENST00000487828 231 ntBASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 AC099522.1-202ENST00000514718 367 ntBASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 RNU4-29P-201ENST00000515943 174 ntBASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 RNA5SP519-201ENST00000516480 119 ntBASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 RN7SKP295-201ENST00000517264 153 ntBASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 RNU6-988P-201ENST00000519081 107 ntBASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 AL118558.2-201ENST00000556294 238 ntBASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 HSPE1P14-201ENST00000605812 302 ntBASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 MIR7973-1-201ENST00000614683 76 ntBASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 FAM157A-202ENST00000615155 405 ntBASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 AL731566.2-201ENST00000618971 317 ntBASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CDK5RAP1Q96SZ6 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDK5RAP1Q96SZ6 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
CDK5RAP1Q96SZ6 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDK5RAP1Q96SZ6 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
CDK5RAP1Q96SZ6 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CDK5RAP1Q96SZ6 MIR448-201ENST00000362131 111 ntBASIC4.44□□□□□ -1.7
CDK5RAP1Q96SZ6 Y_RNA.187-201ENST00000363918 113 ntBASIC4.44□□□□□ -1.7
CDK5RAP1Q96SZ6 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.44□□□□□ -1.7
CDK5RAP1Q96SZ6 RNU6-38P-201ENST00000384085 107 ntBASIC4.44□□□□□ -1.7
CDK5RAP1Q96SZ6 Y_RNA.527-201ENST00000384573 102 ntBASIC4.44□□□□□ -1.7
CDK5RAP1Q96SZ6 EIF5P1-201ENST00000400019 1231 ntBASIC4.44□□□□□ -1.7
CDK5RAP1Q96SZ6 AL603908.1-201ENST00000406098 201 ntBASIC4.44□□□□□ -1.7
CDK5RAP1Q96SZ6 RNU4-26P-201ENST00000410270 107 ntBASIC4.44□□□□□ -1.7
CDK5RAP1Q96SZ6 HMGB3P2-201ENST00000411913 584 ntBASIC4.44□□□□□ -1.7
CDK5RAP1Q96SZ6 AC108032.1-201ENST00000416706 207 ntBASIC4.44□□□□□ -1.7
CDK5RAP1Q96SZ6 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.44□□□□□ -1.7
CDK5RAP1Q96SZ6 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.44□□□□□ -1.7
CDK5RAP1Q96SZ6 COX6CP15-201ENST00000426313 211 ntBASIC4.44□□□□□ -1.7
CDK5RAP1Q96SZ6 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.44□□□□□ -1.7
CDK5RAP1Q96SZ6 AL049734.2-201ENST00000441066 616 ntBASIC4.44□□□□□ -1.7
CDK5RAP1Q96SZ6 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.44□□□□□ -1.7
CDK5RAP1Q96SZ6 HMGB3P22-202ENST00000451823 572 ntBASIC4.44□□□□□ -1.7
CDK5RAP1Q96SZ6 BTF3P15-201ENST00000455606 336 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms