Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL356387.2-201ENST00000422272 243 ntBASIC3.84□□□□□ -1.79
SNX18Q96RF0 AC011998.1-201ENST00000433403 117 ntBASIC3.84□□□□□ -1.79
SNX18Q96RF0 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.84□□□□□ -1.79
SNX18Q96RF0 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.84□□□□□ -1.79
SNX18Q96RF0 RPL35AP15-201ENST00000468042 339 ntBASIC3.84□□□□□ -1.79
SNX18Q96RF0 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SNX18Q96RF0 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.84□□□□□ -1.79
SNX18Q96RF0 AC010486.1-201ENST00000511793 424 ntBASIC3.84□□□□□ -1.79
SNX18Q96RF0 FTH1P9-201ENST00000513251 355 ntBASIC3.84□□□□□ -1.79
SNX18Q96RF0 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.84□□□□□ -1.79
SNX18Q96RF0 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.84□□□□□ -1.79
SNX18Q96RF0 DEFB108D-201ENST00000527787 222 ntBASIC3.84□□□□□ -1.79
SNX18Q96RF0 OR5B19P-201ENST00000531766 928 ntBASIC3.84□□□□□ -1.79
SNX18Q96RF0 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.84□□□□□ -1.79
SNX18Q96RF0 AC128657.1-201ENST00000549459 145 ntBASIC3.84□□□□□ -1.79
SNX18Q96RF0 AC126177.3-201ENST00000551839 688 ntBASIC3.84□□□□□ -1.79
SNX18Q96RF0 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.84□□□□□ -1.79
SNX18Q96RF0 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.84□□□□□ -1.79
SNX18Q96RF0 AC136624.4-201ENST00000573044 370 ntBASIC3.84□□□□□ -1.79
SNX18Q96RF0 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.84□□□□□ -1.79
SNX18Q96RF0 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.84□□□□□ -1.79
SNX18Q96RF0 AC018638.8-201ENST00000588755 281 ntBASIC3.84□□□□□ -1.79
SNX18Q96RF0 AC010525.2-201ENST00000590920 195 ntBASIC3.84□□□□□ -1.79
SNX18Q96RF0 AC005261.5-201ENST00000596280 355 ntBASIC3.84□□□□□ -1.79
SNX18Q96RF0 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.84□□□□□ -1.79
SNX18Q96RF0 AL391261.4-201ENST00000616012 481 ntBASIC3.84□□□□□ -1.79
SNX18Q96RF0 AC244100.1-202ENST00000621554 382 ntBASIC3.84□□□□□ -1.79
SNX18Q96RF0 AC006065.5-201ENST00000623427 349 ntBASIC3.84□□□□□ -1.79
SNX18Q96RF0 AC011944.2-201ENST00000624440 683 ntBASIC3.84□□□□□ -1.79
SNX18Q96RF0 AC100810.6-201ENST00000638068 285 ntBASIC3.84□□□□□ -1.79
SNX18Q96RF0 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
SNX18Q96RF0 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
SNX18Q96RF0 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.84□□□□□ -1.79
SNX18Q96RF0 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.84□□□□□ -1.79
SNX18Q96RF0 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SNX18Q96RF0 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.84□□□□□ -1.8
SNX18Q96RF0 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
SNX18Q96RF0 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SNX18Q96RF0 MTND5P3-201ENST00000438536 1800 ntBASIC3.84□□□□□ -1.8
SNX18Q96RF0 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SNX18Q96RF0 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.83□□□□□ -1.8
SNX18Q96RF0 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
SNX18Q96RF0 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SNX18Q96RF0 XIAPP3-201ENST00000312918 795 ntBASIC3.83□□□□□ -1.8
SNX18Q96RF0 RN7SKP227-201ENST00000364445 330 ntBASIC3.83□□□□□ -1.8
SNX18Q96RF0 Y_RNA.255-201ENST00000364581 97 ntBASIC3.83□□□□□ -1.8
SNX18Q96RF0 RNU6-996P-201ENST00000365438 107 ntBASIC3.83□□□□□ -1.8
SNX18Q96RF0 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
SNX18Q96RF0 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SNX18Q96RF0 RNU6-606P-201ENST00000384721 111 ntBASIC3.83□□□□□ -1.8
SNX18Q96RF0 MIR558-201ENST00000384920 94 ntBASIC3.83□□□□□ -1.8
SNX18Q96RF0 MT-TD-201ENST00000387419 68 ntBASIC3.83□□□□□ -1.8
SNX18Q96RF0 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SNX18Q96RF0 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SNX18Q96RF0 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.83□□□□□ -1.8
SNX18Q96RF0 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.83□□□□□ -1.8
SNX18Q96RF0 MTCYBP8-201ENST00000422855 651 ntBASIC3.83□□□□□ -1.8
SNX18Q96RF0 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.83□□□□□ -1.8
SNX18Q96RF0 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.83□□□□□ -1.8
SNX18Q96RF0 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.83□□□□□ -1.8
SNX18Q96RF0 ATP5HP2-201ENST00000433885 485 ntBASIC3.83□□□□□ -1.8
SNX18Q96RF0 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.83□□□□□ -1.8
SNX18Q96RF0 RPL23AP89-201ENST00000439324 255 ntBASIC3.83□□□□□ -1.8
SNX18Q96RF0 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.83□□□□□ -1.8
SNX18Q96RF0 DDX3P2-201ENST00000446138 111 ntBASIC3.83□□□□□ -1.8
SNX18Q96RF0 RPL23AP81-201ENST00000455252 467 ntBASIC3.83□□□□□ -1.8
SNX18Q96RF0 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.83□□□□□ -1.8
SNX18Q96RF0 AL356010.1-201ENST00000456364 102 ntBASIC3.83□□□□□ -1.8
SNX18Q96RF0 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.83□□□□□ -1.8
SNX18Q96RF0 AC006517.1-201ENST00000480485 328 ntBASIC3.83□□□□□ -1.8
SNX18Q96RF0 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SNX18Q96RF0 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.83□□□□□ -1.8
SNX18Q96RF0 EIF4EP3-201ENST00000498782 656 ntBASIC3.83□□□□□ -1.8
SNX18Q96RF0 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.83□□□□□ -1.8
SNX18Q96RF0 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.83□□□□□ -1.8
SNX18Q96RF0 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.83□□□□□ -1.8
SNX18Q96RF0 RNU6-1095P-201ENST00000516148 108 ntBASIC3.83□□□□□ -1.8
SNX18Q96RF0 RNU2-10P-201ENST00000516375 211 ntBASIC3.83□□□□□ -1.8
SNX18Q96RF0 RNA5SP73-201ENST00000516744 108 ntBASIC3.83□□□□□ -1.8
SNX18Q96RF0 RNU6-1231P-201ENST00000517185 103 ntBASIC3.83□□□□□ -1.8
SNX18Q96RF0 HMGB1P41-201ENST00000520234 440 ntBASIC3.83□□□□□ -1.8
SNX18Q96RF0 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SNX18Q96RF0 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.83□□□□□ -1.8
SNX18Q96RF0 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.83□□□□□ -1.8
SNX18Q96RF0 GLYCAM1-201ENST00000546596 285 ntBASIC3.83□□□□□ -1.8
SNX18Q96RF0 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.83□□□□□ -1.8
SNX18Q96RF0 AC068831.4-201ENST00000556118 109 ntBASIC3.83□□□□□ -1.8
SNX18Q96RF0 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.83□□□□□ -1.8
SNX18Q96RF0 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.83□□□□□ -1.8
SNX18Q96RF0 AP001029.3-201ENST00000588063 596 ntBASIC3.83□□□□□ -1.8
SNX18Q96RF0 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.83□□□□□ -1.8
SNX18Q96RF0 AC113403.1-201ENST00000604910 193 ntBASIC3.83□□□□□ -1.8
SNX18Q96RF0 ARF4P1-201ENST00000605447 541 ntBASIC3.83□□□□□ -1.8
SNX18Q96RF0 AC093838.1-201ENST00000613014 469 ntBASIC3.83□□□□□ -1.8
SNX18Q96RF0 AC140479.6-201ENST00000633535 357 ntBASIC3.83□□□□□ -1.8
SNX18Q96RF0 RIOK3P1-201ENST00000418778 1528 ntBASIC3.83□□□□□ -1.8
SNX18Q96RF0 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.83□□□□□ -1.8
SNX18Q96RF0 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SNX18Q96RF0 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.83□□□□□ -1.8
SNX18Q96RF0 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms