Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.4□□□□□ -1.54
CNTNAP3BQ96NU0 AC006254.2-201ENST00000603259 279 ntBASIC5.4□□□□□ -1.54
CNTNAP3BQ96NU0 SNHG22-203ENST00000617833 660 ntBASIC5.4□□□□□ -1.54
CNTNAP3BQ96NU0 AC087385.3-201ENST00000620477 187 ntBASIC5.4□□□□□ -1.54
CNTNAP3BQ96NU0 CYP4F35P-202ENST00000636121 390 ntBASIC5.4□□□□□ -1.54
CNTNAP3BQ96NU0 AC000095.2-202ENST00000637415 154 ntBASIC5.4□□□□□ -1.54
CNTNAP3BQ96NU0 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
CNTNAP3BQ96NU0 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CNTNAP3BQ96NU0 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CNTNAP3BQ96NU0 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.4□□□□□ -1.55
CNTNAP3BQ96NU0 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 BCORP1-203ENST00000513194 5093 ntBASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 PHKBP1-201ENST00000450951 1951 ntBASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 RNU6-595P-201ENST00000363944 107 ntBASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 MIR134-201ENST00000385258 73 ntBASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 SNORD73A-201ENST00000386062 65 ntBASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 RNU6-700P-201ENST00000391043 107 ntBASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 AL139039.1-201ENST00000401900 692 ntBASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 SNORA11.1-201ENST00000408133 129 ntBASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 DPPA2P2-201ENST00000418220 897 ntBASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 MTCO1P39-201ENST00000426148 480 ntBASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 RAB28P5-201ENST00000427490 651 ntBASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 AL159987.2-201ENST00000432754 307 ntBASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 AC010655.1-201ENST00000449336 292 ntBASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 snoU109.4-201ENST00000458953 143 ntBASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 Y_RNA.638-201ENST00000459374 113 ntBASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 AC021678.3-201ENST00000517893 476 ntBASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 EDDM3DP-201ENST00000554692 434 ntBASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 MIR4679-2-201ENST00000578358 77 ntBASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 MIR4429-201ENST00000580105 73 ntBASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 MIR4308-201ENST00000580634 81 ntBASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 MIR5096-201ENST00000583713 70 ntBASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 AC012119.1-201ENST00000603184 222 ntBASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 AC098826.3-201ENST00000603823 466 ntBASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 FP236240.3-201ENST00000623061 327 ntBASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 AC097372.5-201ENST00000623665 376 ntBASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 AL022311.1-201ENST00000623726 19416 ntBASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CNTNAP3BQ96NU0 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CNTNAP3BQ96NU0 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CNTNAP3BQ96NU0 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
CNTNAP3BQ96NU0 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CNTNAP3BQ96NU0 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CNTNAP3BQ96NU0 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CNTNAP3BQ96NU0 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.38□□□□□ -1.55
CNTNAP3BQ96NU0 MIR133A2-201ENST00000347538 102 ntBASIC5.38□□□□□ -1.55
CNTNAP3BQ96NU0 SNORA63.4-201ENST00000362763 126 ntBASIC5.38□□□□□ -1.55
CNTNAP3BQ96NU0 RNU4-90P-201ENST00000362773 141 ntBASIC5.38□□□□□ -1.55
CNTNAP3BQ96NU0 U3.13-201ENST00000364804 214 ntBASIC5.38□□□□□ -1.55
CNTNAP3BQ96NU0 SNORA57.1-201ENST00000391227 145 ntBASIC5.38□□□□□ -1.55
CNTNAP3BQ96NU0 AL079342.1-201ENST00000401460 267 ntBASIC5.38□□□□□ -1.55
CNTNAP3BQ96NU0 COX6B1P1-201ENST00000415962 213 ntBASIC5.38□□□□□ -1.55
CNTNAP3BQ96NU0 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC5.38□□□□□ -1.55
CNTNAP3BQ96NU0 CEACAMP1-201ENST00000434624 1035 ntBASIC5.38□□□□□ -1.55
CNTNAP3BQ96NU0 AC073264.2-201ENST00000448886 166 ntBASIC5.38□□□□□ -1.55
CNTNAP3BQ96NU0 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.38□□□□□ -1.55
CNTNAP3BQ96NU0 AC234775.1-201ENST00000454247 670 ntBASIC5.38□□□□□ -1.55
CNTNAP3BQ96NU0 AURKAPS2-201ENST00000454983 333 ntBASIC5.38□□□□□ -1.55
CNTNAP3BQ96NU0 PPIAP21-201ENST00000464473 501 ntBASIC5.38□□□□□ -1.55
CNTNAP3BQ96NU0 HMGN2P13-201ENST00000476476 274 ntBASIC5.38□□□□□ -1.55
CNTNAP3BQ96NU0 RPL30P1-201ENST00000488676 339 ntBASIC5.38□□□□□ -1.55
CNTNAP3BQ96NU0 AC113155.1-201ENST00000511141 769 ntBASIC5.38□□□□□ -1.55
CNTNAP3BQ96NU0 AC004980.4-201ENST00000513375 203 ntBASIC5.38□□□□□ -1.55
CNTNAP3BQ96NU0 AP006245.1-201ENST00000522549 120 ntBASIC5.38□□□□□ -1.55
CNTNAP3BQ96NU0 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.38□□□□□ -1.55
CNTNAP3BQ96NU0 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC5.38□□□□□ -1.55
CNTNAP3BQ96NU0 MIR3160-1-201ENST00000577972 85 ntBASIC5.38□□□□□ -1.55
CNTNAP3BQ96NU0 MIR5696-201ENST00000578474 85 ntBASIC5.38□□□□□ -1.55
CNTNAP3BQ96NU0 AC119403.2-201ENST00000590960 598 ntBASIC5.38□□□□□ -1.55
CNTNAP3BQ96NU0 Y_RNA.772-201ENST00000606692 102 ntBASIC5.38□□□□□ -1.55
CNTNAP3BQ96NU0 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.38□□□□□ -1.55
CNTNAP3BQ96NU0 AL137067.2-201ENST00000621202 131 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms