Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.34□□□□□ -1.87
CMTM3Q96MX0 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.34□□□□□ -1.87
CMTM3Q96MX0 AC011944.2-201ENST00000624440 683 ntBASIC3.34□□□□□ -1.87
CMTM3Q96MX0 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.34□□□□□ -1.87
CMTM3Q96MX0 AC090582.1-201ENST00000636321 199 ntBASIC3.34□□□□□ -1.87
CMTM3Q96MX0 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.34□□□□□ -1.87
CMTM3Q96MX0 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.34□□□□□ -1.87
CMTM3Q96MX0 AC007656.2-201ENST00000624902 4547 ntBASIC3.34□□□□□ -1.87
CMTM3Q96MX0 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.34□□□□□ -1.88
CMTM3Q96MX0 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CMTM3Q96MX0 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CMTM3Q96MX0 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.33□□□□□ -1.88
CMTM3Q96MX0 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CMTM3Q96MX0 RNU6-283P-201ENST00000364788 107 ntBASIC3.33□□□□□ -1.88
CMTM3Q96MX0 RNU6-398P-201ENST00000384143 109 ntBASIC3.33□□□□□ -1.88
CMTM3Q96MX0 MIR129-1-201ENST00000384972 72 ntBASIC3.33□□□□□ -1.88
CMTM3Q96MX0 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
CMTM3Q96MX0 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.33□□□□□ -1.88
CMTM3Q96MX0 AL365338.1-201ENST00000422282 858 ntBASIC3.33□□□□□ -1.88
CMTM3Q96MX0 AC012498.1-201ENST00000424037 437 ntBASIC3.33□□□□□ -1.88
CMTM3Q96MX0 AC007283.2-201ENST00000424739 197 ntBASIC3.33□□□□□ -1.88
CMTM3Q96MX0 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.33□□□□□ -1.88
CMTM3Q96MX0 COX6B1P7-201ENST00000430845 235 ntBASIC3.33□□□□□ -1.88
CMTM3Q96MX0 AL353705.1-201ENST00000433468 480 ntBASIC3.33□□□□□ -1.88
CMTM3Q96MX0 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.33□□□□□ -1.88
CMTM3Q96MX0 MTND4P32-201ENST00000437189 1237 ntBASIC3.33□□□□□ -1.88
CMTM3Q96MX0 PIGFP3-201ENST00000441918 722 ntBASIC3.33□□□□□ -1.88
CMTM3Q96MX0 MTND1P27-201ENST00000451117 902 ntBASIC3.33□□□□□ -1.88
CMTM3Q96MX0 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.33□□□□□ -1.88
CMTM3Q96MX0 MTND4LP3-201ENST00000468320 276 ntBASIC3.33□□□□□ -1.88
CMTM3Q96MX0 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.33□□□□□ -1.88
CMTM3Q96MX0 KC877373.1-201ENST00000479066 408 ntBASIC3.33□□□□□ -1.88
CMTM3Q96MX0 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.33□□□□□ -1.88
CMTM3Q96MX0 AL160314.1-201ENST00000490836 438 ntBASIC3.33□□□□□ -1.88
CMTM3Q96MX0 RN7SL604P-201ENST00000492589 296 ntBASIC3.33□□□□□ -1.88
CMTM3Q96MX0 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.33□□□□□ -1.88
CMTM3Q96MX0 KCTD9P5-201ENST00000504141 1170 ntBASIC3.33□□□□□ -1.88
CMTM3Q96MX0 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.33□□□□□ -1.88
CMTM3Q96MX0 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.33□□□□□ -1.88
CMTM3Q96MX0 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.33□□□□□ -1.88
CMTM3Q96MX0 SNORA31.3-201ENST00000516029 96 ntBASIC3.33□□□□□ -1.88
CMTM3Q96MX0 RNU6-711P-201ENST00000517255 106 ntBASIC3.33□□□□□ -1.88
CMTM3Q96MX0 AC087369.1-201ENST00000520775 996 ntBASIC3.33□□□□□ -1.88
CMTM3Q96MX0 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.33□□□□□ -1.88
CMTM3Q96MX0 HIGD1AP1-201ENST00000550979 275 ntBASIC3.33□□□□□ -1.88
CMTM3Q96MX0 AC034105.3-201ENST00000565294 442 ntBASIC3.33□□□□□ -1.88
CMTM3Q96MX0 AMZ2P1-203ENST00000565833 850 ntBASIC3.33□□□□□ -1.88
CMTM3Q96MX0 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.33□□□□□ -1.88
CMTM3Q96MX0 NRBF2P1-201ENST00000587407 859 ntBASIC3.33□□□□□ -1.88
CMTM3Q96MX0 BNIP3P33-201ENST00000598912 569 ntBASIC3.33□□□□□ -1.88
CMTM3Q96MX0 AC079089.3-201ENST00000603094 673 ntBASIC3.33□□□□□ -1.88
CMTM3Q96MX0 AL161729.4-201ENST00000604650 476 ntBASIC3.33□□□□□ -1.88
CMTM3Q96MX0 AC080013.6-201ENST00000606185 215 ntBASIC3.33□□□□□ -1.88
CMTM3Q96MX0 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.33□□□□□ -1.88
CMTM3Q96MX0 MIR6820-201ENST00000611508 62 ntBASIC3.33□□□□□ -1.88
CMTM3Q96MX0 AC048344.4-201ENST00000619744 527 ntBASIC3.33□□□□□ -1.88
CMTM3Q96MX0 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.33□□□□□ -1.88
CMTM3Q96MX0 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.33□□□□□ -1.88
CMTM3Q96MX0 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.33□□□□□ -1.88
CMTM3Q96MX0 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.33□□□□□ -1.88
CMTM3Q96MX0 AC110994.2-201ENST00000635481 492 ntBASIC3.33□□□□□ -1.88
CMTM3Q96MX0 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.33□□□□□ -1.88
CMTM3Q96MX0 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.33□□□□□ -1.88
CMTM3Q96MX0 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
CMTM3Q96MX0 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
CMTM3Q96MX0 AC022336.2-201ENST00000568966 2538 ntBASIC3.32□□□□□ -1.88
CMTM3Q96MX0 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CMTM3Q96MX0 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CMTM3Q96MX0 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
CMTM3Q96MX0 HSPE1P11-201ENST00000339579 310 ntBASIC3.32□□□□□ -1.88
CMTM3Q96MX0 SNORD56.2-201ENST00000363242 71 ntBASIC3.32□□□□□ -1.88
CMTM3Q96MX0 RNU6-701P-201ENST00000384059 107 ntBASIC3.32□□□□□ -1.88
CMTM3Q96MX0 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.32□□□□□ -1.88
CMTM3Q96MX0 AC127391.1-201ENST00000411737 98 ntBASIC3.32□□□□□ -1.88
CMTM3Q96MX0 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.32□□□□□ -1.88
CMTM3Q96MX0 ELOCP4-201ENST00000420090 333 ntBASIC3.32□□□□□ -1.88
CMTM3Q96MX0 MTCO2P34-201ENST00000421994 607 ntBASIC3.32□□□□□ -1.88
CMTM3Q96MX0 RPEP3-201ENST00000425462 676 ntBASIC3.32□□□□□ -1.88
CMTM3Q96MX0 BTF3P10-201ENST00000433415 495 ntBASIC3.32□□□□□ -1.88
CMTM3Q96MX0 AC244505.5-201ENST00000443639 207 ntBASIC3.32□□□□□ -1.88
CMTM3Q96MX0 RANP8-201ENST00000444720 713 ntBASIC3.32□□□□□ -1.88
CMTM3Q96MX0 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.32□□□□□ -1.88
CMTM3Q96MX0 RPL21P11-201ENST00000461458 483 ntBASIC3.32□□□□□ -1.88
CMTM3Q96MX0 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.32□□□□□ -1.88
CMTM3Q96MX0 RN7SL432P-201ENST00000484057 298 ntBASIC3.32□□□□□ -1.88
CMTM3Q96MX0 MTND4P2-201ENST00000507767 1203 ntBASIC3.32□□□□□ -1.88
CMTM3Q96MX0 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.32□□□□□ -1.88
CMTM3Q96MX0 SNORA18.6-201ENST00000516792 115 ntBASIC3.32□□□□□ -1.88
CMTM3Q96MX0 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.32□□□□□ -1.88
CMTM3Q96MX0 AP006587.4-201ENST00000526053 529 ntBASIC3.32□□□□□ -1.88
CMTM3Q96MX0 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.32□□□□□ -1.88
CMTM3Q96MX0 TVP23BP1-201ENST00000557500 617 ntBASIC3.32□□□□□ -1.88
CMTM3Q96MX0 TGIF1P1-201ENST00000558095 802 ntBASIC3.32□□□□□ -1.88
CMTM3Q96MX0 AC006362.1-201ENST00000567392 174 ntBASIC3.32□□□□□ -1.88
CMTM3Q96MX0 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.32□□□□□ -1.88
CMTM3Q96MX0 HMGB1P6-201ENST00000569046 646 ntBASIC3.32□□□□□ -1.88
CMTM3Q96MX0 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.32□□□□□ -1.88
CMTM3Q96MX0 AC005951.1-201ENST00000576706 485 ntBASIC3.32□□□□□ -1.88
CMTM3Q96MX0 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.32□□□□□ -1.88
CMTM3Q96MX0 RSL24D1P11-201ENST00000591045 491 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms