Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AC009097.3-201ENST00000563557 1018 ntBASIC2.55□□□□□ -2
C9orf72Q96LT7 ACTR3BP3-201ENST00000565577 979 ntBASIC2.55□□□□□ -2
C9orf72Q96LT7 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.55□□□□□ -2
C9orf72Q96LT7 AC006213.4-201ENST00000616184 634 ntBASIC2.55□□□□□ -2
C9orf72Q96LT7 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.55□□□□□ -2
C9orf72Q96LT7 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.55□□□□□ -2
C9orf72Q96LT7 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.55□□□□□ -2
C9orf72Q96LT7 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
C9orf72Q96LT7 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
C9orf72Q96LT7 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
C9orf72Q96LT7 Y_RNA.25-201ENST00000362528 102 ntBASIC2.54□□□□□ -2
C9orf72Q96LT7 RNA5SP393-201ENST00000363423 117 ntBASIC2.54□□□□□ -2
C9orf72Q96LT7 RNA5SP126-201ENST00000365092 109 ntBASIC2.54□□□□□ -2
C9orf72Q96LT7 RNU1-138P-201ENST00000384093 164 ntBASIC2.54□□□□□ -2
C9orf72Q96LT7 RNU6-301P-201ENST00000384277 107 ntBASIC2.54□□□□□ -2
C9orf72Q96LT7 AL139413.1-201ENST00000421309 217 ntBASIC2.54□□□□□ -2
C9orf72Q96LT7 AC007742.1-201ENST00000425789 329 ntBASIC2.54□□□□□ -2
C9orf72Q96LT7 DPRXP1-201ENST00000426312 460 ntBASIC2.54□□□□□ -2
C9orf72Q96LT7 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.54□□□□□ -2
C9orf72Q96LT7 AC098826.1-201ENST00000433943 471 ntBASIC2.54□□□□□ -2
C9orf72Q96LT7 ELOCP26-201ENST00000436067 329 ntBASIC2.54□□□□□ -2
C9orf72Q96LT7 RPL39P6-201ENST00000448289 150 ntBASIC2.54□□□□□ -2
C9orf72Q96LT7 AL353691.1-201ENST00000451332 387 ntBASIC2.54□□□□□ -2
C9orf72Q96LT7 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.54□□□□□ -2
C9orf72Q96LT7 OFD1P3Y-201ENST00000453312 783 ntBASIC2.54□□□□□ -2
C9orf72Q96LT7 AC010486.1-201ENST00000511793 424 ntBASIC2.54□□□□□ -2
C9orf72Q96LT7 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.54□□□□□ -2
C9orf72Q96LT7 RNU6-928P-201ENST00000516876 104 ntBASIC2.54□□□□□ -2
C9orf72Q96LT7 RNU6-1261P-201ENST00000517194 104 ntBASIC2.54□□□□□ -2
C9orf72Q96LT7 RN7SKP40-201ENST00000517211 242 ntBASIC2.54□□□□□ -2
C9orf72Q96LT7 MTCO1P47-201ENST00000523889 1271 ntBASIC2.54□□□□□ -2
C9orf72Q96LT7 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.54□□□□□ -2
C9orf72Q96LT7 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.54□□□□□ -2
C9orf72Q96LT7 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.54□□□□□ -2
C9orf72Q96LT7 AC234778.2-201ENST00000566241 354 ntBASIC2.54□□□□□ -2
C9orf72Q96LT7 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.54□□□□□ -2
C9orf72Q96LT7 MIR4446-201ENST00000578505 67 ntBASIC2.54□□□□□ -2
C9orf72Q96LT7 AL445435.1-201ENST00000604232 665 ntBASIC2.54□□□□□ -2
C9orf72Q96LT7 AL049779.4-201ENST00000604500 156 ntBASIC2.54□□□□□ -2
C9orf72Q96LT7 AL592148.2-201ENST00000612210 372 ntBASIC2.54□□□□□ -2
C9orf72Q96LT7 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC2.54□□□□□ -2
C9orf72Q96LT7 AC243829.7-201ENST00000633081 225 ntBASIC2.54□□□□□ -2
C9orf72Q96LT7 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
C9orf72Q96LT7 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
C9orf72Q96LT7 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
C9orf72Q96LT7 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.53□□□□□ -2
C9orf72Q96LT7 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.53□□□□□ -2
C9orf72Q96LT7 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.53□□□□□ -2
C9orf72Q96LT7 RNU1-51P-201ENST00000365345 176 ntBASIC2.53□□□□□ -2
C9orf72Q96LT7 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.53□□□□□ -2
C9orf72Q96LT7 AL445529.1-201ENST00000398713 389 ntBASIC2.53□□□□□ -2
C9orf72Q96LT7 RPS3AP24-201ENST00000407896 734 ntBASIC2.53□□□□□ -2
C9orf72Q96LT7 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.53□□□□□ -2
C9orf72Q96LT7 RPL7L1P10-201ENST00000427790 463 ntBASIC2.53□□□□□ -2
C9orf72Q96LT7 AC092634.2-201ENST00000428146 1010 ntBASIC2.53□□□□□ -2
C9orf72Q96LT7 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.53□□□□□ -2
C9orf72Q96LT7 AC090774.1-201ENST00000435925 246 ntBASIC2.53□□□□□ -2
C9orf72Q96LT7 ARPC3P1-201ENST00000437218 533 ntBASIC2.53□□□□□ -2
C9orf72Q96LT7 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC2.53□□□□□ -2
C9orf72Q96LT7 AC092798.1-201ENST00000458542 409 ntBASIC2.53□□□□□ -2
C9orf72Q96LT7 AC026410.2-201ENST00000460281 156 ntBASIC2.53□□□□□ -2
C9orf72Q96LT7 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.53□□□□□ -2
C9orf72Q96LT7 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.53□□□□□ -2
C9orf72Q96LT7 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.53□□□□□ -2
C9orf72Q96LT7 AC008628.1-201ENST00000508663 265 ntBASIC2.53□□□□□ -2
C9orf72Q96LT7 RNA5SP148-201ENST00000516527 94 ntBASIC2.53□□□□□ -2
C9orf72Q96LT7 RNA5SP402-201ENST00000517148 110 ntBASIC2.53□□□□□ -2
C9orf72Q96LT7 OR5BN1P-201ENST00000532955 829 ntBASIC2.53□□□□□ -2
C9orf72Q96LT7 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.53□□□□□ -2
C9orf72Q96LT7 AC090888.1-201ENST00000561335 1141 ntBASIC2.53□□□□□ -2
C9orf72Q96LT7 VN1R87P-201ENST00000596706 487 ntBASIC2.53□□□□□ -2
C9orf72Q96LT7 AL645944.1-201ENST00000603857 493 ntBASIC2.53□□□□□ -2
C9orf72Q96LT7 AC104237.2-201ENST00000612456 443 ntBASIC2.53□□□□□ -2
C9orf72Q96LT7 AL157770.1-201ENST00000623049 439 ntBASIC2.53□□□□□ -2
C9orf72Q96LT7 AC068880.5-201ENST00000624331 290 ntBASIC2.53□□□□□ -2
C9orf72Q96LT7 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
C9orf72Q96LT7 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.53□□□□□ -2.01
C9orf72Q96LT7 RNU5A-1-201ENST00000362698 116 ntBASIC2.52□□□□□ -2.01
C9orf72Q96LT7 MIR506-201ENST00000384998 124 ntBASIC2.52□□□□□ -2.01
C9orf72Q96LT7 AL603865.2-201ENST00000401679 213 ntBASIC2.52□□□□□ -2.01
C9orf72Q96LT7 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.52□□□□□ -2.01
C9orf72Q96LT7 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.52□□□□□ -2.01
C9orf72Q96LT7 AC092427.1-201ENST00000439177 601 ntBASIC2.52□□□□□ -2.01
C9orf72Q96LT7 AL513328.1-201ENST00000446460 224 ntBASIC2.52□□□□□ -2.01
C9orf72Q96LT7 RN7SL429P-201ENST00000479090 223 ntBASIC2.52□□□□□ -2.01
C9orf72Q96LT7 RN7SL489P-201ENST00000486185 223 ntBASIC2.52□□□□□ -2.01
C9orf72Q96LT7 RN7SL327P-201ENST00000488659 223 ntBASIC2.52□□□□□ -2.01
C9orf72Q96LT7 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC2.52□□□□□ -2.01
C9orf72Q96LT7 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.52□□□□□ -2.01
C9orf72Q96LT7 AC125611.1-201ENST00000549563 229 ntBASIC2.52□□□□□ -2.01
C9orf72Q96LT7 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.52□□□□□ -2.01
C9orf72Q96LT7 AC024560.3-201ENST00000608482 349 ntBASIC2.52□□□□□ -2.01
C9orf72Q96LT7 RN7SL853P-201ENST00000617250 223 ntBASIC2.52□□□□□ -2.01
C9orf72Q96LT7 AC084824.4-201ENST00000620106 731 ntBASIC2.52□□□□□ -2.01
C9orf72Q96LT7 AL356094.1-201ENST00000624663 1212 ntBASIC2.52□□□□□ -2.01
C9orf72Q96LT7 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.52□□□□□ -2.01
C9orf72Q96LT7 MKKS-204ENST00000639674 192 ntBASIC2.52□□□□□ -2.01
C9orf72Q96LT7 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
C9orf72Q96LT7 ZNF271P-202ENST00000465539 1970 ntBASIC2.52□□□□□ -2.01
C9orf72Q96LT7 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms