Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.79□□□□□ -1.64
SHDQ96IW2 AC008264.1-201ENST00000447612 367 ntBASIC4.79□□□□□ -1.64
SHDQ96IW2 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.79□□□□□ -1.64
SHDQ96IW2 RNU7-167P-201ENST00000459160 62 ntBASIC4.79□□□□□ -1.64
SHDQ96IW2 SNORD19B-201ENST00000459623 84 ntBASIC4.79□□□□□ -1.64
SHDQ96IW2 RN7SL604P-201ENST00000492589 296 ntBASIC4.79□□□□□ -1.64
SHDQ96IW2 AC023424.1-201ENST00000496058 459 ntBASIC4.79□□□□□ -1.64
SHDQ96IW2 AC079140.5-201ENST00000507882 310 ntBASIC4.79□□□□□ -1.64
SHDQ96IW2 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.79□□□□□ -1.64
SHDQ96IW2 AC104136.1-201ENST00000512969 394 ntBASIC4.79□□□□□ -1.64
SHDQ96IW2 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.79□□□□□ -1.64
SHDQ96IW2 RNU6-559P-201ENST00000516151 98 ntBASIC4.79□□□□□ -1.64
SHDQ96IW2 RNU6-256P-201ENST00000516747 97 ntBASIC4.79□□□□□ -1.64
SHDQ96IW2 SNORA25.17-201ENST00000517184 124 ntBASIC4.79□□□□□ -1.64
SHDQ96IW2 RNU6-709P-201ENST00000517257 104 ntBASIC4.79□□□□□ -1.64
SHDQ96IW2 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.79□□□□□ -1.64
SHDQ96IW2 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.79□□□□□ -1.64
SHDQ96IW2 AC005951.2-201ENST00000576282 495 ntBASIC4.79□□□□□ -1.64
SHDQ96IW2 MIR3942-201ENST00000585264 109 ntBASIC4.79□□□□□ -1.64
SHDQ96IW2 AC104662.1-201ENST00000604448 511 ntBASIC4.79□□□□□ -1.64
SHDQ96IW2 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
SHDQ96IW2 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
SHDQ96IW2 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
SHDQ96IW2 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SHDQ96IW2 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SHDQ96IW2 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.79□□□□□ -1.64
SHDQ96IW2 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SHDQ96IW2 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SHDQ96IW2 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.79□□□□□ -1.64
SHDQ96IW2 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SHDQ96IW2 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SHDQ96IW2 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SHDQ96IW2 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SHDQ96IW2 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SHDQ96IW2 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SHDQ96IW2 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.78□□□□□ -1.64
SHDQ96IW2 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SHDQ96IW2 RNU6-715P-201ENST00000365204 103 ntBASIC4.78□□□□□ -1.64
SHDQ96IW2 MIR134-201ENST00000385258 73 ntBASIC4.78□□□□□ -1.64
SHDQ96IW2 AL139039.1-201ENST00000401900 692 ntBASIC4.78□□□□□ -1.64
SHDQ96IW2 AL354751.2-201ENST00000415471 210 ntBASIC4.78□□□□□ -1.64
SHDQ96IW2 AL645608.4-201ENST00000423619 154 ntBASIC4.78□□□□□ -1.64
SHDQ96IW2 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.78□□□□□ -1.64
SHDQ96IW2 AC079168.2-201ENST00000453977 416 ntBASIC4.78□□□□□ -1.64
SHDQ96IW2 DYNLL1P5-201ENST00000467158 270 ntBASIC4.78□□□□□ -1.64
SHDQ96IW2 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.78□□□□□ -1.64
SHDQ96IW2 AC092451.1-201ENST00000480211 153 ntBASIC4.78□□□□□ -1.64
SHDQ96IW2 RPL21P93-201ENST00000480465 489 ntBASIC4.78□□□□□ -1.64
SHDQ96IW2 ENPP7P11-201ENST00000505915 627 ntBASIC4.78□□□□□ -1.64
SHDQ96IW2 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SHDQ96IW2 RNU6-927P-201ENST00000516199 100 ntBASIC4.78□□□□□ -1.64
SHDQ96IW2 RNU6-566P-201ENST00000516790 107 ntBASIC4.78□□□□□ -1.64
SHDQ96IW2 IGLVIV-65-201ENST00000517313 360 ntBASIC4.78□□□□□ -1.64
SHDQ96IW2 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.78□□□□□ -1.64
SHDQ96IW2 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.78□□□□□ -1.64
SHDQ96IW2 MRPL49P2-201ENST00000521066 465 ntBASIC4.78□□□□□ -1.64
SHDQ96IW2 AP000827.1-201ENST00000527814 258 ntBASIC4.78□□□□□ -1.64
SHDQ96IW2 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.78□□□□□ -1.64
SHDQ96IW2 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.78□□□□□ -1.64
SHDQ96IW2 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4.78□□□□□ -1.64
SHDQ96IW2 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.78□□□□□ -1.64
SHDQ96IW2 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.78□□□□□ -1.64
SHDQ96IW2 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.78□□□□□ -1.64
SHDQ96IW2 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SHDQ96IW2 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.78□□□□□ -1.64
SHDQ96IW2 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SHDQ96IW2 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.78□□□□□ -1.64
SHDQ96IW2 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
SHDQ96IW2 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.78□□□□□ -1.64
SHDQ96IW2 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
SHDQ96IW2 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
SHDQ96IW2 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SHDQ96IW2 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SHDQ96IW2 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.77□□□□□ -1.65
SHDQ96IW2 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.77□□□□□ -1.65
SHDQ96IW2 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SHDQ96IW2 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.77□□□□□ -1.65
SHDQ96IW2 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
SHDQ96IW2 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
SHDQ96IW2 AL450345.1-202ENST00000605741 3881 ntBASIC4.77□□□□□ -1.65
SHDQ96IW2 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SHDQ96IW2 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
SHDQ96IW2 RNU6-254P-201ENST00000363377 107 ntBASIC4.77□□□□□ -1.65
SHDQ96IW2 Y_RNA.259-201ENST00000364619 101 ntBASIC4.77□□□□□ -1.65
SHDQ96IW2 AL359837.1-201ENST00000381357 287 ntBASIC4.77□□□□□ -1.65
SHDQ96IW2 AL590704.1-201ENST00000402856 794 ntBASIC4.77□□□□□ -1.65
SHDQ96IW2 LAP3P1-201ENST00000403648 294 ntBASIC4.77□□□□□ -1.65
SHDQ96IW2 RPS12P24-201ENST00000412619 387 ntBASIC4.77□□□□□ -1.65
SHDQ96IW2 RPLP0P7-201ENST00000416050 667 ntBASIC4.77□□□□□ -1.65
SHDQ96IW2 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.77□□□□□ -1.65
SHDQ96IW2 AL160275.3-201ENST00000423876 471 ntBASIC4.77□□□□□ -1.65
SHDQ96IW2 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.77□□□□□ -1.65
SHDQ96IW2 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.77□□□□□ -1.65
SHDQ96IW2 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.77□□□□□ -1.65
SHDQ96IW2 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.77□□□□□ -1.65
SHDQ96IW2 MTND4P17-201ENST00000470444 350 ntBASIC4.77□□□□□ -1.65
SHDQ96IW2 RPL36AP41-201ENST00000493820 306 ntBASIC4.77□□□□□ -1.65
SHDQ96IW2 AP002812.1-201ENST00000495378 474 ntBASIC4.77□□□□□ -1.65
SHDQ96IW2 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.77□□□□□ -1.65
SHDQ96IW2 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 139.1 ms