Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 RNA5SP171-201ENST00000391071 115 ntBASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 RNA5SP107-201ENST00000411358 122 ntBASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 RAB9AP3-201ENST00000412737 573 ntBASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 RPL21P24-201ENST00000413752 448 ntBASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 AC133104.1-201ENST00000429100 218 ntBASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 AC079448.1-201ENST00000449377 373 ntBASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 RAB9AP1-201ENST00000449393 573 ntBASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 RPL23AP31-201ENST00000456160 467 ntBASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 SRRM1P2-201ENST00000464531 1192 ntBASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 AL049714.1-201ENST00000466686 347 ntBASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 RPL31P13-201ENST00000484151 370 ntBASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 RPL23AP55-201ENST00000498163 452 ntBASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 RNA5SP143-201ENST00000516936 115 ntBASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 RNU6-64P-201ENST00000517119 105 ntBASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 RNU6-840P-201ENST00000517275 65 ntBASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 AC007991.1-201ENST00000522680 631 ntBASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 AC006960.3-201ENST00000561845 705 ntBASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 AL845331.3-202ENST00000562856 261 ntBASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 AC010546.1-201ENST00000569391 485 ntBASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 MIR3186-201ENST00000577404 85 ntBASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 AL137849.1-201ENST00000604767 169 ntBASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 AC073534.2-201ENST00000620377 381 ntBASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 AC012442.3-202ENST00000636742 206 ntBASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 LRRC77P-213ENST00000637727 880 ntBASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
CHMP4CQ96CF2 AC092326.2-201ENST00000624772 1561 ntBASIC4.53□□□□□ -1.69
CHMP4CQ96CF2 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.52□□□□□ -1.69
CHMP4CQ96CF2 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.52□□□□□ -1.69
CHMP4CQ96CF2 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CHMP4CQ96CF2 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.52□□□□□ -1.69
CHMP4CQ96CF2 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CHMP4CQ96CF2 SNORA31-201ENST00000362607 130 ntBASIC4.52□□□□□ -1.69
CHMP4CQ96CF2 RNU4-1-201ENST00000363925 141 ntBASIC4.52□□□□□ -1.69
CHMP4CQ96CF2 RN7SKP226-201ENST00000364912 300 ntBASIC4.52□□□□□ -1.69
CHMP4CQ96CF2 GSTA9P-201ENST00000406231 611 ntBASIC4.52□□□□□ -1.69
CHMP4CQ96CF2 MTND3P17-201ENST00000416968 344 ntBASIC4.52□□□□□ -1.69
CHMP4CQ96CF2 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CHMP4CQ96CF2 PPP1R11P2-201ENST00000423543 382 ntBASIC4.52□□□□□ -1.69
CHMP4CQ96CF2 FCF1P1-201ENST00000432690 571 ntBASIC4.52□□□□□ -1.69
CHMP4CQ96CF2 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC4.52□□□□□ -1.69
CHMP4CQ96CF2 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.52□□□□□ -1.69
CHMP4CQ96CF2 C1DP4-201ENST00000455429 424 ntBASIC4.52□□□□□ -1.69
CHMP4CQ96CF2 AC008481.1-201ENST00000463278 396 ntBASIC4.52□□□□□ -1.69
CHMP4CQ96CF2 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.52□□□□□ -1.69
CHMP4CQ96CF2 AC091133.4-201ENST00000511142 308 ntBASIC4.52□□□□□ -1.69
CHMP4CQ96CF2 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.52□□□□□ -1.69
CHMP4CQ96CF2 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.52□□□□□ -1.69
CHMP4CQ96CF2 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.52□□□□□ -1.69
CHMP4CQ96CF2 RNA5SP208-201ENST00000516156 78 ntBASIC4.52□□□□□ -1.69
CHMP4CQ96CF2 AC008489.1-201ENST00000524271 483 ntBASIC4.52□□□□□ -1.69
CHMP4CQ96CF2 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.52□□□□□ -1.69
CHMP4CQ96CF2 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.52□□□□□ -1.69
CHMP4CQ96CF2 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.52□□□□□ -1.69
CHMP4CQ96CF2 AF038458.1-201ENST00000588406 262 ntBASIC4.52□□□□□ -1.69
CHMP4CQ96CF2 AP001330.4-201ENST00000604350 154 ntBASIC4.52□□□□□ -1.69
CHMP4CQ96CF2 AL022154.1-201ENST00000604698 785 ntBASIC4.52□□□□□ -1.69
CHMP4CQ96CF2 AP000860.1-201ENST00000605250 559 ntBASIC4.52□□□□□ -1.69
CHMP4CQ96CF2 AL713922.2-201ENST00000619384 716 ntBASIC4.52□□□□□ -1.69
CHMP4CQ96CF2 AC136475.10-201ENST00000620253 385 ntBASIC4.52□□□□□ -1.69
CHMP4CQ96CF2 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.52□□□□□ -1.69
CHMP4CQ96CF2 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CHMP4CQ96CF2 ZNF285B-201ENST00000561698 1767 ntBASIC4.52□□□□□ -1.69
CHMP4CQ96CF2 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.52□□□□□ -1.69
CHMP4CQ96CF2 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CHMP4CQ96CF2 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.52□□□□□ -1.69
CHMP4CQ96CF2 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CHMP4CQ96CF2 AC009812.4-201ENST00000569134 1805 ntBASIC4.51□□□□□ -1.69
CHMP4CQ96CF2 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
CHMP4CQ96CF2 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CHMP4CQ96CF2 SNORA23-201ENST00000365128 182 ntBASIC4.51□□□□□ -1.69
CHMP4CQ96CF2 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
CHMP4CQ96CF2 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.51□□□□□ -1.69
CHMP4CQ96CF2 RNU6-76P-201ENST00000384060 104 ntBASIC4.51□□□□□ -1.69
CHMP4CQ96CF2 PTMAP2-201ENST00000397627 327 ntBASIC4.51□□□□□ -1.69
CHMP4CQ96CF2 RNU6ATAC-201ENST00000408749 126 ntBASIC4.51□□□□□ -1.69
CHMP4CQ96CF2 Y_RNA.599-201ENST00000410489 109 ntBASIC4.51□□□□□ -1.69
CHMP4CQ96CF2 AC009237.5-201ENST00000414271 501 ntBASIC4.51□□□□□ -1.69
CHMP4CQ96CF2 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.51□□□□□ -1.69
CHMP4CQ96CF2 AC005094.1-201ENST00000440420 368 ntBASIC4.51□□□□□ -1.69
CHMP4CQ96CF2 MTCO3P45-201ENST00000443036 613 ntBASIC4.51□□□□□ -1.69
CHMP4CQ96CF2 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CHMP4CQ96CF2 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.51□□□□□ -1.69
CHMP4CQ96CF2 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms