Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AL359880.1-201ENST00000621879 266 ntBASIC4.15□□□□□ -1.75
TRIM43Q96BQ3 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.15□□□□□ -1.75
TRIM43Q96BQ3 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.15□□□□□ -1.75
TRIM43Q96BQ3 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
TRIM43Q96BQ3 AL645937.1-201ENST00000641739 1652 ntBASIC4.15□□□□□ -1.75
TRIM43Q96BQ3 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TRIM43Q96BQ3 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.15□□□□□ -1.75
TRIM43Q96BQ3 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.15□□□□□ -1.75
TRIM43Q96BQ3 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.14□□□□□ -1.75
TRIM43Q96BQ3 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.14□□□□□ -1.75
TRIM43Q96BQ3 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
TRIM43Q96BQ3 AL133383.2-201ENST00000622958 2336 ntBASIC4.14□□□□□ -1.75
TRIM43Q96BQ3 AC067945.1-201ENST00000342609 618 ntBASIC4.14□□□□□ -1.75
TRIM43Q96BQ3 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.14□□□□□ -1.75
TRIM43Q96BQ3 RNU1-33P-201ENST00000364249 162 ntBASIC4.14□□□□□ -1.75
TRIM43Q96BQ3 RNU6-282P-201ENST00000365357 103 ntBASIC4.14□□□□□ -1.75
TRIM43Q96BQ3 MIR3074-201ENST00000384885 81 ntBASIC4.14□□□□□ -1.75
TRIM43Q96BQ3 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
TRIM43Q96BQ3 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
TRIM43Q96BQ3 SNORA3C-201ENST00000408792 125 ntBASIC4.14□□□□□ -1.75
TRIM43Q96BQ3 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.14□□□□□ -1.75
TRIM43Q96BQ3 UBE2FP1-201ENST00000416536 447 ntBASIC4.14□□□□□ -1.75
TRIM43Q96BQ3 EI24P1-201ENST00000416584 867 ntBASIC4.14□□□□□ -1.75
TRIM43Q96BQ3 SSXP9-201ENST00000417503 292 ntBASIC4.14□□□□□ -1.75
TRIM43Q96BQ3 AC005300.1-201ENST00000428401 373 ntBASIC4.14□□□□□ -1.75
TRIM43Q96BQ3 AC005326.1-201ENST00000429197 123 ntBASIC4.14□□□□□ -1.75
TRIM43Q96BQ3 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.14□□□□□ -1.75
TRIM43Q96BQ3 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.14□□□□□ -1.75
TRIM43Q96BQ3 AC005008.1-201ENST00000456151 612 ntBASIC4.14□□□□□ -1.75
TRIM43Q96BQ3 HMGB3P30-201ENST00000457863 606 ntBASIC4.14□□□□□ -1.75
TRIM43Q96BQ3 AC079382.1-201ENST00000493346 557 ntBASIC4.14□□□□□ -1.75
TRIM43Q96BQ3 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM43Q96BQ3 STMN1P2-201ENST00000508435 439 ntBASIC4.14□□□□□ -1.75
TRIM43Q96BQ3 RNA5SP164-201ENST00000516533 110 ntBASIC4.14□□□□□ -1.75
TRIM43Q96BQ3 MYL12AP1-201ENST00000518490 515 ntBASIC4.14□□□□□ -1.75
TRIM43Q96BQ3 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.14□□□□□ -1.75
TRIM43Q96BQ3 AP001893.2-201ENST00000526949 202 ntBASIC4.14□□□□□ -1.75
TRIM43Q96BQ3 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.14□□□□□ -1.75
TRIM43Q96BQ3 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.14□□□□□ -1.75
TRIM43Q96BQ3 SUB1P2-201ENST00000556401 297 ntBASIC4.14□□□□□ -1.75
TRIM43Q96BQ3 AC068790.5-201ENST00000602741 355 ntBASIC4.14□□□□□ -1.75
TRIM43Q96BQ3 AL137843.1-201ENST00000605078 385 ntBASIC4.14□□□□□ -1.75
TRIM43Q96BQ3 AL034351.1-201ENST00000605288 668 ntBASIC4.14□□□□□ -1.75
TRIM43Q96BQ3 YPEL5P2-201ENST00000605553 359 ntBASIC4.14□□□□□ -1.75
TRIM43Q96BQ3 AC015813.4-201ENST00000610469 179 ntBASIC4.14□□□□□ -1.75
TRIM43Q96BQ3 AL355365.1-201ENST00000616480 294 ntBASIC4.14□□□□□ -1.75
TRIM43Q96BQ3 AL713922.2-201ENST00000619384 716 ntBASIC4.14□□□□□ -1.75
TRIM43Q96BQ3 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC4.14□□□□□ -1.75
TRIM43Q96BQ3 MIR8057-201ENST00000620957 69 ntBASIC4.14□□□□□ -1.75
TRIM43Q96BQ3 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.14□□□□□ -1.75
TRIM43Q96BQ3 ELF2P3-201ENST00000445099 1506 ntBASIC4.14□□□□□ -1.75
TRIM43Q96BQ3 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM43Q96BQ3 AC105074.1-201ENST00000623380 3095 ntBASIC4.14□□□□□ -1.75
TRIM43Q96BQ3 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.14□□□□□ -1.75
TRIM43Q96BQ3 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM43Q96BQ3 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM43Q96BQ3 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.13□□□□□ -1.75
TRIM43Q96BQ3 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TRIM43Q96BQ3 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.13□□□□□ -1.75
TRIM43Q96BQ3 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
TRIM43Q96BQ3 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.13□□□□□ -1.75
TRIM43Q96BQ3 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
TRIM43Q96BQ3 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TRIM43Q96BQ3 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
TRIM43Q96BQ3 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.13□□□□□ -1.75
TRIM43Q96BQ3 SNORD9-201ENST00000362566 104 ntBASIC4.13□□□□□ -1.75
TRIM43Q96BQ3 U3.11-201ENST00000364476 212 ntBASIC4.13□□□□□ -1.75
TRIM43Q96BQ3 RNA5SP167-201ENST00000365461 116 ntBASIC4.13□□□□□ -1.75
TRIM43Q96BQ3 RNU6-456P-201ENST00000384493 107 ntBASIC4.13□□□□□ -1.75
TRIM43Q96BQ3 RNU6-882P-201ENST00000391025 103 ntBASIC4.13□□□□□ -1.75
TRIM43Q96BQ3 AL590002.1-201ENST00000406554 418 ntBASIC4.13□□□□□ -1.75
TRIM43Q96BQ3 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.13□□□□□ -1.75
TRIM43Q96BQ3 AC004866.2-201ENST00000438285 481 ntBASIC4.13□□□□□ -1.75
TRIM43Q96BQ3 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.13□□□□□ -1.75
TRIM43Q96BQ3 NPM1P49-201ENST00000448027 714 ntBASIC4.13□□□□□ -1.75
TRIM43Q96BQ3 AC140076.1-201ENST00000449897 361 ntBASIC4.13□□□□□ -1.75
TRIM43Q96BQ3 RPL21P10-201ENST00000463521 490 ntBASIC4.13□□□□□ -1.75
TRIM43Q96BQ3 AC023598.1-201ENST00000472521 361 ntBASIC4.13□□□□□ -1.75
TRIM43Q96BQ3 RPS15AP36-201ENST00000492022 382 ntBASIC4.13□□□□□ -1.75
TRIM43Q96BQ3 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TRIM43Q96BQ3 AC068305.1-201ENST00000497406 726 ntBASIC4.13□□□□□ -1.75
TRIM43Q96BQ3 AC011352.1-201ENST00000512300 793 ntBASIC4.13□□□□□ -1.75
TRIM43Q96BQ3 Vault.1-201ENST00000516474 102 ntBASIC4.13□□□□□ -1.75
TRIM43Q96BQ3 SNORA31.20-201ENST00000517111 133 ntBASIC4.13□□□□□ -1.75
TRIM43Q96BQ3 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.13□□□□□ -1.75
TRIM43Q96BQ3 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.13□□□□□ -1.75
TRIM43Q96BQ3 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TRIM43Q96BQ3 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.13□□□□□ -1.75
TRIM43Q96BQ3 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.13□□□□□ -1.75
TRIM43Q96BQ3 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.13□□□□□ -1.75
TRIM43Q96BQ3 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.13□□□□□ -1.75
TRIM43Q96BQ3 AC012182.1-201ENST00000570133 895 ntBASIC4.13□□□□□ -1.75
TRIM43Q96BQ3 MIR4801-201ENST00000582704 82 ntBASIC4.13□□□□□ -1.75
TRIM43Q96BQ3 AC025946.2-201ENST00000603398 234 ntBASIC4.13□□□□□ -1.75
TRIM43Q96BQ3 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.13□□□□□ -1.75
TRIM43Q96BQ3 AC012507.3-201ENST00000603556 477 ntBASIC4.13□□□□□ -1.75
TRIM43Q96BQ3 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.13□□□□□ -1.75
TRIM43Q96BQ3 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.13□□□□□ -1.75
TRIM43Q96BQ3 AL136313.1-201ENST00000624804 202 ntBASIC4.13□□□□□ -1.75
TRIM43Q96BQ3 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms