Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 U3.6-201ENST00000363622 211 ntBASIC5.8□□□□□ -1.48
HLA-CQ95604 Y_RNA.233-201ENST00000364407 101 ntBASIC5.8□□□□□ -1.48
HLA-CQ95604 RNU6-384P-201ENST00000364900 104 ntBASIC5.8□□□□□ -1.48
HLA-CQ95604 Y_RNA.435-201ENST00000384095 112 ntBASIC5.8□□□□□ -1.48
HLA-CQ95604 RNU6-937P-201ENST00000384325 106 ntBASIC5.8□□□□□ -1.48
HLA-CQ95604 RNU6-102P-201ENST00000384485 104 ntBASIC5.8□□□□□ -1.48
HLA-CQ95604 RNU6-394P-201ENST00000410735 107 ntBASIC5.8□□□□□ -1.48
HLA-CQ95604 DPPA2P2-201ENST00000418220 897 ntBASIC5.8□□□□□ -1.48
HLA-CQ95604 AL158156.1-201ENST00000422509 473 ntBASIC5.8□□□□□ -1.48
HLA-CQ95604 IGHV5-78-201ENST00000450948 295 ntBASIC5.8□□□□□ -1.48
HLA-CQ95604 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC5.8□□□□□ -1.48
HLA-CQ95604 AC104164.2-201ENST00000496953 495 ntBASIC5.8□□□□□ -1.48
HLA-CQ95604 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.8□□□□□ -1.48
HLA-CQ95604 RNU2-31P-201ENST00000516954 155 ntBASIC5.8□□□□□ -1.48
HLA-CQ95604 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.8□□□□□ -1.48
HLA-CQ95604 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.8□□□□□ -1.48
HLA-CQ95604 RPL21P7-201ENST00000557463 483 ntBASIC5.8□□□□□ -1.48
HLA-CQ95604 ATP5J2P6-201ENST00000565203 266 ntBASIC5.8□□□□□ -1.48
HLA-CQ95604 MIR3144-201ENST00000579460 79 ntBASIC5.8□□□□□ -1.48
HLA-CQ95604 MIR4659A-201ENST00000580269 81 ntBASIC5.8□□□□□ -1.48
HLA-CQ95604 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.8□□□□□ -1.48
HLA-CQ95604 AL139395.1-201ENST00000603662 160 ntBASIC5.8□□□□□ -1.48
HLA-CQ95604 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.8□□□□□ -1.48
HLA-CQ95604 AC083809.1-201ENST00000615051 472 ntBASIC5.8□□□□□ -1.48
HLA-CQ95604 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.8□□□□□ -1.48
HLA-CQ95604 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
HLA-CQ95604 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.8□□□□□ -1.48
HLA-CQ95604 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC5.8□□□□□ -1.48
HLA-CQ95604 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
HLA-CQ95604 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC5.8□□□□□ -1.48
HLA-CQ95604 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-CQ95604 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-CQ95604 AC073365.1-203ENST00000641055 1992 ntBASIC5.8□□□□□ -1.48
HLA-CQ95604 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC5.8□□□□□ -1.48
HLA-CQ95604 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-CQ95604 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-CQ95604 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-CQ95604 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
HLA-CQ95604 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.8□□□□□ -1.48
HLA-CQ95604 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
HLA-CQ95604 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-CQ95604 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC5.79□□□□□ -1.48
HLA-CQ95604 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.79□□□□□ -1.48
HLA-CQ95604 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-CQ95604 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
HLA-CQ95604 AC116096.1-201ENST00000566804 2314 ntBASIC5.79□□□□□ -1.48
HLA-CQ95604 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-CQ95604 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-CQ95604 RNU6-263P-201ENST00000363811 107 ntBASIC5.79□□□□□ -1.48
HLA-CQ95604 RNU6-47P-201ENST00000383866 107 ntBASIC5.79□□□□□ -1.48
HLA-CQ95604 RNU6-1035P-201ENST00000384477 107 ntBASIC5.79□□□□□ -1.48
HLA-CQ95604 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
HLA-CQ95604 AL022722.2-201ENST00000402519 180 ntBASIC5.79□□□□□ -1.48
HLA-CQ95604 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC5.79□□□□□ -1.48
HLA-CQ95604 AC119751.6-201ENST00000416712 186 ntBASIC5.79□□□□□ -1.48
HLA-CQ95604 MTATP6P4-201ENST00000427725 675 ntBASIC5.79□□□□□ -1.48
HLA-CQ95604 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC5.79□□□□□ -1.48
HLA-CQ95604 AL162739.1-201ENST00000450606 307 ntBASIC5.79□□□□□ -1.48
HLA-CQ95604 RPL23AP81-201ENST00000455252 467 ntBASIC5.79□□□□□ -1.48
HLA-CQ95604 RPS29P27-201ENST00000463711 170 ntBASIC5.79□□□□□ -1.48
HLA-CQ95604 AC012158.1-204ENST00000483430 465 ntBASIC5.79□□□□□ -1.48
HLA-CQ95604 AC073581.1-201ENST00000519036 575 ntBASIC5.79□□□□□ -1.48
HLA-CQ95604 MIR4311-201ENST00000580794 100 ntBASIC5.79□□□□□ -1.48
HLA-CQ95604 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.79□□□□□ -1.48
HLA-CQ95604 AL020997.2-201ENST00000602607 184 ntBASIC5.79□□□□□ -1.48
HLA-CQ95604 AC005046.1-201ENST00000608515 625 ntBASIC5.79□□□□□ -1.48
HLA-CQ95604 AC108706.1-201ENST00000611053 297 ntBASIC5.79□□□□□ -1.48
HLA-CQ95604 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-CQ95604 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-CQ95604 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-CQ95604 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.79□□□□□ -1.48
HLA-CQ95604 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-CQ95604 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-CQ95604 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-CQ95604 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
HLA-CQ95604 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-CQ95604 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
HLA-CQ95604 AL591135.1-201ENST00000401578 5914 ntBASIC5.78□□□□□ -1.48
HLA-CQ95604 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-CQ95604 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.78□□□□□ -1.48
HLA-CQ95604 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.78□□□□□ -1.48
HLA-CQ95604 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-CQ95604 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-CQ95604 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-CQ95604 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-CQ95604 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-CQ95604 RNU6-1301P-201ENST00000362724 104 ntBASIC5.78□□□□□ -1.48
HLA-CQ95604 RNU6-1025P-201ENST00000410629 104 ntBASIC5.78□□□□□ -1.48
HLA-CQ95604 Y_RNA.623-201ENST00000411128 95 ntBASIC5.78□□□□□ -1.48
HLA-CQ95604 COX6B1P1-201ENST00000415962 213 ntBASIC5.78□□□□□ -1.48
HLA-CQ95604 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.78□□□□□ -1.48
HLA-CQ95604 AL358453.1-201ENST00000422522 250 ntBASIC5.78□□□□□ -1.48
HLA-CQ95604 RPL21P40-201ENST00000428586 483 ntBASIC5.78□□□□□ -1.48
HLA-CQ95604 AL590399.6-201ENST00000446396 307 ntBASIC5.78□□□□□ -1.48
HLA-CQ95604 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.78□□□□□ -1.48
HLA-CQ95604 PPP1R11P1-201ENST00000486095 376 ntBASIC5.78□□□□□ -1.48
HLA-CQ95604 AL035690.1-201ENST00000490892 383 ntBASIC5.78□□□□□ -1.48
HLA-CQ95604 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.78□□□□□ -1.48
HLA-CQ95604 AK3P2-201ENST00000507976 429 ntBASIC5.78□□□□□ -1.48
HLA-CQ95604 RNU6-479P-201ENST00000516348 105 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms