Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 RNY3-201ENST00000365484 102 ntBASIC1.31□□□□□ -2.2
USP9XQ93008 TRAPPC2P5-201ENST00000426293 308 ntBASIC1.31□□□□□ -2.2
USP9XQ93008 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC1.31□□□□□ -2.2
USP9XQ93008 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC1.31□□□□□ -2.2
USP9XQ93008 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC1.31□□□□□ -2.2
USP9XQ93008 AC007375.1-201ENST00000554513 578 ntBASIC1.31□□□□□ -2.2
USP9XQ93008 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.31□□□□□ -2.2
USP9XQ93008 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
USP9XQ93008 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
USP9XQ93008 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
USP9XQ93008 RNU6-984P-201ENST00000363236 109 ntBASIC1.31□□□□□ -2.2
USP9XQ93008 DYNLT3P1-201ENST00000378574 347 ntBASIC1.31□□□□□ -2.2
USP9XQ93008 MIR1197-201ENST00000408818 88 ntBASIC1.31□□□□□ -2.2
USP9XQ93008 RPL19P1-201ENST00000411635 428 ntBASIC1.31□□□□□ -2.2
USP9XQ93008 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.31□□□□□ -2.2
USP9XQ93008 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.31□□□□□ -2.2
USP9XQ93008 MTCYBP18-201ENST00000501056 747 ntBASIC1.31□□□□□ -2.2
USP9XQ93008 AC090071.1-201ENST00000507713 644 ntBASIC1.31□□□□□ -2.2
USP9XQ93008 RNU1-40P-201ENST00000516816 164 ntBASIC1.31□□□□□ -2.2
USP9XQ93008 RNU1-97P-201ENST00000516872 164 ntBASIC1.31□□□□□ -2.2
USP9XQ93008 AP003072.2-201ENST00000527756 676 ntBASIC1.31□□□□□ -2.2
USP9XQ93008 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.31□□□□□ -2.2
USP9XQ93008 uc_338.12-201ENST00000616344 181 ntBASIC1.31□□□□□ -2.2
USP9XQ93008 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.31□□□□□ -2.2
USP9XQ93008 AC008669.1-201ENST00000565823 2178 ntBASIC1.3□□□□□ -2.2
USP9XQ93008 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
USP9XQ93008 MIR373-201ENST00000362273 69 ntBASIC1.3□□□□□ -2.2
USP9XQ93008 CYCSP48-201ENST00000417124 323 ntBASIC1.3□□□□□ -2.2
USP9XQ93008 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.3□□□□□ -2.2
USP9XQ93008 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.3□□□□□ -2.2
USP9XQ93008 RNA5SP402-201ENST00000517148 110 ntBASIC1.3□□□□□ -2.2
USP9XQ93008 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC1.3□□□□□ -2.2
USP9XQ93008 CBX3P8-201ENST00000532412 525 ntBASIC1.3□□□□□ -2.2
USP9XQ93008 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC1.3□□□□□ -2.2
USP9XQ93008 AC023813.2-201ENST00000564321 469 ntBASIC1.3□□□□□ -2.2
USP9XQ93008 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC1.3□□□□□ -2.2
USP9XQ93008 MIR8087-201ENST00000612745 78 ntBASIC1.3□□□□□ -2.2
USP9XQ93008 AC104307.1-201ENST00000616142 196 ntBASIC1.3□□□□□ -2.2
USP9XQ93008 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.3□□□□□ -2.2
USP9XQ93008 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
USP9XQ93008 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.3□□□□□ -2.2
USP9XQ93008 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
USP9XQ93008 Z82195.2-201ENST00000612348 18351 ntBASIC1.3□□□□□ -2.2
USP9XQ93008 SNORD114-23-201ENST00000363536 72 ntBASIC1.3□□□□□ -2.2
USP9XQ93008 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
USP9XQ93008 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.3□□□□□ -2.2
USP9XQ93008 AC084364.2-201ENST00000546924 395 ntBASIC1.3□□□□□ -2.2
USP9XQ93008 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
USP9XQ93008 AP001029.3-201ENST00000588063 596 ntBASIC1.3□□□□□ -2.2
USP9XQ93008 AC146944.4-201ENST00000602697 718 ntBASIC1.3□□□□□ -2.2
USP9XQ93008 PABPC1P9-201ENST00000426076 1612 ntBASIC1.29□□□□□ -2.2
USP9XQ93008 AC027673.1-201ENST00000456245 405 ntBASIC1.29□□□□□ -2.2
USP9XQ93008 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.29□□□□□ -2.2
USP9XQ93008 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.29□□□□□ -2.2
USP9XQ93008 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.29□□□□□ -2.2
USP9XQ93008 MIR4448-201ENST00000584360 86 ntBASIC1.29□□□□□ -2.2
USP9XQ93008 AC087468.1-201ENST00000604365 630 ntBASIC1.29□□□□□ -2.2
USP9XQ93008 AC006329.2-201ENST00000611491 394 ntBASIC1.29□□□□□ -2.2
USP9XQ93008 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.29□□□□□ -2.2
USP9XQ93008 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
USP9XQ93008 AL512430.2-201ENST00000406786 339 ntBASIC1.29□□□□□ -2.2
USP9XQ93008 AL596276.1-201ENST00000434465 418 ntBASIC1.29□□□□□ -2.2
USP9XQ93008 RPS29P29-201ENST00000456396 171 ntBASIC1.29□□□□□ -2.2
USP9XQ93008 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.29□□□□□ -2.2
USP9XQ93008 AC073901.1-201ENST00000462471 408 ntBASIC1.29□□□□□ -2.2
USP9XQ93008 HMGN1P8-201ENST00000463578 288 ntBASIC1.29□□□□□ -2.2
USP9XQ93008 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.29□□□□□ -2.2
USP9XQ93008 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.29□□□□□ -2.2
USP9XQ93008 AC138649.5-201ENST00000637456 137 ntBASIC1.29□□□□□ -2.2
USP9XQ93008 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.29□□□□□ -2.2
USP9XQ93008 AC002546.1-201ENST00000588041 2504 ntBASIC1.29□□□□□ -2.2
USP9XQ93008 HSPE1P11-201ENST00000339579 310 ntBASIC1.28□□□□□ -2.2
USP9XQ93008 SNORA16.1-201ENST00000364597 132 ntBASIC1.28□□□□□ -2.2
USP9XQ93008 AC092638.1-201ENST00000411966 1275 ntBASIC1.28□□□□□ -2.2
USP9XQ93008 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.28□□□□□ -2.2
USP9XQ93008 AC090453.1-201ENST00000495560 436 ntBASIC1.28□□□□□ -2.2
USP9XQ93008 MTCO3P44-201ENST00000510977 541 ntBASIC1.28□□□□□ -2.2
USP9XQ93008 SNORA31.24-201ENST00000517232 57 ntBASIC1.28□□□□□ -2.2
USP9XQ93008 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.28□□□□□ -2.2
USP9XQ93008 HSPE1P4-201ENST00000550617 308 ntBASIC1.28□□□□□ -2.2
USP9XQ93008 GAS5-AS1-201ENST00000602767 694 ntBASIC1.28□□□□□ -2.2
USP9XQ93008 Y_RNA.488-201ENST00000384403 102 ntBASIC1.28□□□□□ -2.2
USP9XQ93008 MCTS2P-201ENST00000394552 546 ntBASIC1.28□□□□□ -2.2
USP9XQ93008 AC005517.2-201ENST00000424673 553 ntBASIC1.28□□□□□ -2.2
USP9XQ93008 AC087373.1-201ENST00000524920 491 ntBASIC1.28□□□□□ -2.2
USP9XQ93008 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC1.28□□□□□ -2.2
USP9XQ93008 ABI1P1-201ENST00000603375 1120 ntBASIC1.28□□□□□ -2.2
USP9XQ93008 AC012493.3-201ENST00000604494 112 ntBASIC1.28□□□□□ -2.2
USP9XQ93008 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
USP9XQ93008 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
USP9XQ93008 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
USP9XQ93008 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
USP9XQ93008 AC019155.1-201ENST00000382242 574 ntBASIC1.27□□□□□ -2.21
USP9XQ93008 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.27□□□□□ -2.21
USP9XQ93008 AC024614.2-201ENST00000577584 372 ntBASIC1.27□□□□□ -2.21
USP9XQ93008 AC007742.2-201ENST00000618226 398 ntBASIC1.27□□□□□ -2.21
USP9XQ93008 AL158801.5-201ENST00000623123 465 ntBASIC1.27□□□□□ -2.21
USP9XQ93008 ZNF271P-202ENST00000465539 1970 ntBASIC1.27□□□□□ -2.21
USP9XQ93008 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
USP9XQ93008 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms