Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 AC025554.1-201ENST00000505641 188 ntBASIC4.94□□□□□ -1.62
BRF1Q92994 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
BRF1Q92994 RNU6-1170P-201ENST00000515974 106 ntBASIC4.94□□□□□ -1.62
BRF1Q92994 SNORA25.17-201ENST00000517184 124 ntBASIC4.94□□□□□ -1.62
BRF1Q92994 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.94□□□□□ -1.62
BRF1Q92994 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.94□□□□□ -1.62
BRF1Q92994 MTND4P7-201ENST00000523876 130 ntBASIC4.94□□□□□ -1.62
BRF1Q92994 DEFB109D-201ENST00000529497 240 ntBASIC4.94□□□□□ -1.62
BRF1Q92994 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.94□□□□□ -1.62
BRF1Q92994 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.94□□□□□ -1.62
BRF1Q92994 TVP23BP1-201ENST00000557500 617 ntBASIC4.94□□□□□ -1.62
BRF1Q92994 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.94□□□□□ -1.62
BRF1Q92994 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.94□□□□□ -1.62
BRF1Q92994 AP000942.4-201ENST00000604811 241 ntBASIC4.94□□□□□ -1.62
BRF1Q92994 AC114781.5-201ENST00000615297 108 ntBASIC4.94□□□□□ -1.62
BRF1Q92994 uc_338.15-201ENST00000615470 191 ntBASIC4.94□□□□□ -1.62
BRF1Q92994 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
BRF1Q92994 U6.114-201ENST00000636407 96 ntBASIC4.94□□□□□ -1.62
BRF1Q92994 AC090971.4-201ENST00000560291 1800 ntBASIC4.94□□□□□ -1.62
BRF1Q92994 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.94□□□□□ -1.62
BRF1Q92994 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.94□□□□□ -1.62
BRF1Q92994 MTND4P14-201ENST00000435799 1354 ntBASIC4.93□□□□□ -1.62
BRF1Q92994 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
BRF1Q92994 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
BRF1Q92994 Y_RNA.167-201ENST00000363735 109 ntBASIC4.93□□□□□ -1.62
BRF1Q92994 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.93□□□□□ -1.62
BRF1Q92994 RNU6-432P-201ENST00000384196 109 ntBASIC4.93□□□□□ -1.62
BRF1Q92994 RNU6-43P-201ENST00000384302 107 ntBASIC4.93□□□□□ -1.62
BRF1Q92994 RNU6-821P-201ENST00000390995 107 ntBASIC4.93□□□□□ -1.62
BRF1Q92994 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
BRF1Q92994 MIR548P-201ENST00000408336 84 ntBASIC4.93□□□□□ -1.62
BRF1Q92994 RNU4-25P-201ENST00000410569 230 ntBASIC4.93□□□□□ -1.62
BRF1Q92994 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.93□□□□□ -1.62
BRF1Q92994 AC068533.1-201ENST00000418542 415 ntBASIC4.93□□□□□ -1.62
BRF1Q92994 ELOCP18-201ENST00000434209 337 ntBASIC4.93□□□□□ -1.62
BRF1Q92994 BRK1P2-201ENST00000442875 223 ntBASIC4.93□□□□□ -1.62
BRF1Q92994 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.93□□□□□ -1.62
BRF1Q92994 RNU6-1208P-201ENST00000459588 107 ntBASIC4.93□□□□□ -1.62
BRF1Q92994 HMGB1P25-201ENST00000468402 607 ntBASIC4.93□□□□□ -1.62
BRF1Q92994 AC109327.1-201ENST00000471666 403 ntBASIC4.93□□□□□ -1.62
BRF1Q92994 AC068587.1-201ENST00000483613 781 ntBASIC4.93□□□□□ -1.62
BRF1Q92994 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.93□□□□□ -1.62
BRF1Q92994 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.93□□□□□ -1.62
BRF1Q92994 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.93□□□□□ -1.62
BRF1Q92994 AC093840.1-201ENST00000511599 336 ntBASIC4.93□□□□□ -1.62
BRF1Q92994 MYL12AP1-201ENST00000518490 515 ntBASIC4.93□□□□□ -1.62
BRF1Q92994 AC100870.1-201ENST00000522035 505 ntBASIC4.93□□□□□ -1.62
BRF1Q92994 AC009643.1-201ENST00000532030 391 ntBASIC4.93□□□□□ -1.62
BRF1Q92994 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.93□□□□□ -1.62
BRF1Q92994 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
BRF1Q92994 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.93□□□□□ -1.62
BRF1Q92994 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.93□□□□□ -1.62
BRF1Q92994 AC063950.1-201ENST00000552036 308 ntBASIC4.93□□□□□ -1.62
BRF1Q92994 AL118558.2-201ENST00000556294 238 ntBASIC4.93□□□□□ -1.62
BRF1Q92994 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.93□□□□□ -1.62
BRF1Q92994 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.93□□□□□ -1.62
BRF1Q92994 LLPHP1-201ENST00000603571 367 ntBASIC4.93□□□□□ -1.62
BRF1Q92994 AC012443.1-201ENST00000605605 231 ntBASIC4.93□□□□□ -1.62
BRF1Q92994 uc_338.34-201ENST00000617467 174 ntBASIC4.93□□□□□ -1.62
BRF1Q92994 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
BRF1Q92994 AC016588.2-201ENST00000632484 3021 ntBASIC4.93□□□□□ -1.62
BRF1Q92994 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
BRF1Q92994 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.93□□□□□ -1.62
BRF1Q92994 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
BRF1Q92994 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
BRF1Q92994 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
BRF1Q92994 ZNF33CP-201ENST00000432492 2030 ntBASIC4.92□□□□□ -1.62
BRF1Q92994 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
BRF1Q92994 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.92□□□□□ -1.62
BRF1Q92994 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.92□□□□□ -1.62
BRF1Q92994 AC244517.1-201ENST00000606030 2086 ntBASIC4.92□□□□□ -1.62
BRF1Q92994 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.92□□□□□ -1.62
BRF1Q92994 RNA5SP388-201ENST00000362584 119 ntBASIC4.92□□□□□ -1.62
BRF1Q92994 SNORD115-7-201ENST00000365306 82 ntBASIC4.92□□□□□ -1.62
BRF1Q92994 Y_RNA.339-201ENST00000365325 102 ntBASIC4.92□□□□□ -1.62
BRF1Q92994 SNORA56-201ENST00000383966 129 ntBASIC4.92□□□□□ -1.62
BRF1Q92994 RNU6-738P-201ENST00000384531 106 ntBASIC4.92□□□□□ -1.62
BRF1Q92994 Y_RNA.579-201ENST00000390939 94 ntBASIC4.92□□□□□ -1.62
BRF1Q92994 AL109755.1-201ENST00000401791 649 ntBASIC4.92□□□□□ -1.62
BRF1Q92994 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.92□□□□□ -1.62
BRF1Q92994 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.92□□□□□ -1.62
BRF1Q92994 RPS20P1-201ENST00000434853 354 ntBASIC4.92□□□□□ -1.62
BRF1Q92994 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.92□□□□□ -1.62
BRF1Q92994 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.92□□□□□ -1.62
BRF1Q92994 AC010655.1-201ENST00000449336 292 ntBASIC4.92□□□□□ -1.62
BRF1Q92994 TPT1P13-201ENST00000449760 499 ntBASIC4.92□□□□□ -1.62
BRF1Q92994 AC009963.2-201ENST00000453431 138 ntBASIC4.92□□□□□ -1.62
BRF1Q92994 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.92□□□□□ -1.62
BRF1Q92994 AL162395.1-201ENST00000457882 422 ntBASIC4.92□□□□□ -1.62
BRF1Q92994 MTND4P17-201ENST00000470444 350 ntBASIC4.92□□□□□ -1.62
BRF1Q92994 RN7SL585P-201ENST00000470538 280 ntBASIC4.92□□□□□ -1.62
BRF1Q92994 RPS27AP1-201ENST00000475545 471 ntBASIC4.92□□□□□ -1.62
BRF1Q92994 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.92□□□□□ -1.62
BRF1Q92994 Y_RNA.654-201ENST00000497848 106 ntBASIC4.92□□□□□ -1.62
BRF1Q92994 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
BRF1Q92994 PARP4P3-201ENST00000510265 317 ntBASIC4.92□□□□□ -1.62
BRF1Q92994 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC4.92□□□□□ -1.62
BRF1Q92994 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.92□□□□□ -1.62
BRF1Q92994 RNA5SP154-201ENST00000516193 111 ntBASIC4.92□□□□□ -1.62
BRF1Q92994 HMGN1P28-201ENST00000521340 364 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms