Protein–RNA interactions for Protein: Q92576

PHF3, PHD finger protein 3, humanhuman

Known RBP Predictions only

Length 2,039 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3Q92576 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
PHF3Q92576 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
PHF3Q92576 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.56□□□□□ -2
PHF3Q92576 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
PHF3Q92576 RNU4-28P-201ENST00000364739 141 ntBASIC2.56□□□□□ -2
PHF3Q92576 RNA5SP21-201ENST00000410917 96 ntBASIC2.56□□□□□ -2
PHF3Q92576 AC109780.2-201ENST00000413467 845 ntBASIC2.56□□□□□ -2
PHF3Q92576 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.56□□□□□ -2
PHF3Q92576 AL356867.1-201ENST00000429623 299 ntBASIC2.56□□□□□ -2
PHF3Q92576 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.56□□□□□ -2
PHF3Q92576 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.56□□□□□ -2
PHF3Q92576 TRGVB-201ENST00000453257 471 ntBASIC2.56□□□□□ -2
PHF3Q92576 MTND1P9-201ENST00000453775 944 ntBASIC2.56□□□□□ -2
PHF3Q92576 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.56□□□□□ -2
PHF3Q92576 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.56□□□□□ -2
PHF3Q92576 RPS27AP1-201ENST00000475545 471 ntBASIC2.56□□□□□ -2
PHF3Q92576 AL049830.2-201ENST00000480072 201 ntBASIC2.56□□□□□ -2
PHF3Q92576 AC091951.3-201ENST00000504093 246 ntBASIC2.56□□□□□ -2
PHF3Q92576 AC093281.2-201ENST00000510153 597 ntBASIC2.56□□□□□ -2
PHF3Q92576 RNU6-714P-201ENST00000516963 103 ntBASIC2.56□□□□□ -2
PHF3Q92576 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.56□□□□□ -2
PHF3Q92576 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.56□□□□□ -2
PHF3Q92576 AC068587.4-201ENST00000533893 186 ntBASIC2.56□□□□□ -2
PHF3Q92576 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.56□□□□□ -2
PHF3Q92576 FAM60BP-201ENST00000578364 658 ntBASIC2.56□□□□□ -2
PHF3Q92576 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.56□□□□□ -2
PHF3Q92576 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.56□□□□□ -2
PHF3Q92576 BNIP3P39-201ENST00000601077 554 ntBASIC2.56□□□□□ -2
PHF3Q92576 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.56□□□□□ -2
PHF3Q92576 AC011451.2-201ENST00000604303 598 ntBASIC2.56□□□□□ -2
PHF3Q92576 AL133507.1-201ENST00000605269 557 ntBASIC2.56□□□□□ -2
PHF3Q92576 MIR6733-201ENST00000635723 61 ntBASIC2.56□□□□□ -2
PHF3Q92576 OR4G2P-202ENST00000641004 1759 ntBASIC2.56□□□□□ -2
PHF3Q92576 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.55□□□□□ -2
PHF3Q92576 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
PHF3Q92576 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
PHF3Q92576 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.55□□□□□ -2
PHF3Q92576 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.55□□□□□ -2
PHF3Q92576 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PHF3Q92576 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC2.55□□□□□ -2
PHF3Q92576 RNU6-289P-201ENST00000364093 107 ntBASIC2.55□□□□□ -2
PHF3Q92576 RNU4-68P-201ENST00000364314 141 ntBASIC2.55□□□□□ -2
PHF3Q92576 RNU6-1207P-201ENST00000384343 107 ntBASIC2.55□□□□□ -2
PHF3Q92576 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.55□□□□□ -2
PHF3Q92576 RNU6-1242P-201ENST00000391052 103 ntBASIC2.55□□□□□ -2
PHF3Q92576 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.55□□□□□ -2
PHF3Q92576 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.55□□□□□ -2
PHF3Q92576 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.55□□□□□ -2
PHF3Q92576 AL035407.1-201ENST00000429211 571 ntBASIC2.55□□□□□ -2
PHF3Q92576 ZNF736P11Y-201ENST00000442535 1213 ntBASIC2.55□□□□□ -2
PHF3Q92576 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC2.55□□□□□ -2
PHF3Q92576 SNORD109B-201ENST00000458961 67 ntBASIC2.55□□□□□ -2
PHF3Q92576 SNORD109A-201ENST00000459128 67 ntBASIC2.55□□□□□ -2
PHF3Q92576 AC090525.1-201ENST00000479116 478 ntBASIC2.55□□□□□ -2
PHF3Q92576 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.55□□□□□ -2
PHF3Q92576 AC083906.5-201ENST00000503722 328 ntBASIC2.55□□□□□ -2
PHF3Q92576 AC103783.1-201ENST00000520506 373 ntBASIC2.55□□□□□ -2
PHF3Q92576 AP003497.1-201ENST00000528472 562 ntBASIC2.55□□□□□ -2
PHF3Q92576 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.55□□□□□ -2
PHF3Q92576 TRAV37-201ENST00000553906 342 ntBASIC2.55□□□□□ -2
PHF3Q92576 CYCSP39-201ENST00000565821 309 ntBASIC2.55□□□□□ -2
PHF3Q92576 AC010653.1-201ENST00000571108 881 ntBASIC2.55□□□□□ -2
PHF3Q92576 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.55□□□□□ -2
PHF3Q92576 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
PHF3Q92576 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PHF3Q92576 AC008264.2-201ENST00000610193 3731 ntBASIC2.55□□□□□ -2
PHF3Q92576 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
PHF3Q92576 RNU6-343P-201ENST00000364709 104 ntBASIC2.54□□□□□ -2
PHF3Q92576 RNU6-432P-201ENST00000384196 109 ntBASIC2.54□□□□□ -2
PHF3Q92576 Y_RNA.548-201ENST00000384656 105 ntBASIC2.54□□□□□ -2
PHF3Q92576 MIR591-201ENST00000385290 95 ntBASIC2.54□□□□□ -2
PHF3Q92576 RNU6-584P-201ENST00000410350 95 ntBASIC2.54□□□□□ -2
PHF3Q92576 RNU2-52P-201ENST00000410680 190 ntBASIC2.54□□□□□ -2
PHF3Q92576 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.54□□□□□ -2
PHF3Q92576 MTND5P14-201ENST00000441481 1267 ntBASIC2.54□□□□□ -2
PHF3Q92576 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.54□□□□□ -2
PHF3Q92576 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.54□□□□□ -2
PHF3Q92576 AC114981.1-201ENST00000503897 678 ntBASIC2.54□□□□□ -2
PHF3Q92576 AC109464.2-201ENST00000510242 943 ntBASIC2.54□□□□□ -2
PHF3Q92576 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.54□□□□□ -2
PHF3Q92576 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.54□□□□□ -2
PHF3Q92576 AL132857.1-201ENST00000555180 708 ntBASIC2.54□□□□□ -2
PHF3Q92576 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.54□□□□□ -2
PHF3Q92576 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.54□□□□□ -2
PHF3Q92576 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.54□□□□□ -2
PHF3Q92576 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.54□□□□□ -2
PHF3Q92576 AC106900.2-201ENST00000604994 317 ntBASIC2.54□□□□□ -2
PHF3Q92576 AP000240.1-201ENST00000609910 452 ntBASIC2.54□□□□□ -2
PHF3Q92576 AP000676.3-201ENST00000623299 569 ntBASIC2.54□□□□□ -2
PHF3Q92576 AC090897.3-201ENST00000636973 1157 ntBASIC2.54□□□□□ -2
PHF3Q92576 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.54□□□□□ -2
PHF3Q92576 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.54□□□□□ -2
PHF3Q92576 AC138915.3-201ENST00000562908 1389 ntBASIC2.54□□□□□ -2
PHF3Q92576 AC092593.1-201ENST00000515413 1815 ntBASIC2.54□□□□□ -2
PHF3Q92576 RNU6-83P-201ENST00000384568 112 ntBASIC2.54□□□□□ -2
PHF3Q92576 MIR767-201ENST00000390228 109 ntBASIC2.54□□□□□ -2
PHF3Q92576 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.54□□□□□ -2
PHF3Q92576 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.54□□□□□ -2
PHF3Q92576 AL645937.1-202ENST00000421799 937 ntBASIC2.54□□□□□ -2
PHF3Q92576 AC233728.2-201ENST00000425348 757 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms