Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 AC128657.1-201ENST00000549459 145 ntBASIC4.79□□□□□ -1.64
DDX1Q92499 AL163153.1-201ENST00000554223 283 ntBASIC4.79□□□□□ -1.64
DDX1Q92499 AC110588.1-201ENST00000559699 137 ntBASIC4.79□□□□□ -1.64
DDX1Q92499 AC026470.2-201ENST00000561492 181 ntBASIC4.79□□□□□ -1.64
DDX1Q92499 AC026464.5-201ENST00000562497 722 ntBASIC4.79□□□□□ -1.64
DDX1Q92499 SNORD84-203ENST00000584275 78 ntBASIC4.79□□□□□ -1.64
DDX1Q92499 MIR3149-201ENST00000584629 83 ntBASIC4.79□□□□□ -1.64
DDX1Q92499 AC105224.1-201ENST00000587055 421 ntBASIC4.79□□□□□ -1.64
DDX1Q92499 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.79□□□□□ -1.64
DDX1Q92499 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.79□□□□□ -1.64
DDX1Q92499 DPPA3P3-201ENST00000603842 430 ntBASIC4.79□□□□□ -1.64
DDX1Q92499 AL355598.1-201ENST00000604169 202 ntBASIC4.79□□□□□ -1.64
DDX1Q92499 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.79□□□□□ -1.64
DDX1Q92499 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.79□□□□□ -1.64
DDX1Q92499 AC087588.2-201ENST00000617667 426 ntBASIC4.79□□□□□ -1.64
DDX1Q92499 MIR6130-201ENST00000619419 109 ntBASIC4.79□□□□□ -1.64
DDX1Q92499 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
DDX1Q92499 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
DDX1Q92499 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
DDX1Q92499 LINC01355-201ENST00000566551 5444 ntBASIC4.79□□□□□ -1.64
DDX1Q92499 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
DDX1Q92499 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
DDX1Q92499 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
DDX1Q92499 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.79□□□□□ -1.64
DDX1Q92499 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.79□□□□□ -1.64
DDX1Q92499 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
DDX1Q92499 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.78□□□□□ -1.64
DDX1Q92499 LARP1BP1-201ENST00000506036 1359 ntBASIC4.78□□□□□ -1.64
DDX1Q92499 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
DDX1Q92499 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
DDX1Q92499 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.78□□□□□ -1.64
DDX1Q92499 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.78□□□□□ -1.64
DDX1Q92499 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
DDX1Q92499 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
DDX1Q92499 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
DDX1Q92499 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
DDX1Q92499 DDX10P1-201ENST00000448545 1933 ntBASIC4.78□□□□□ -1.64
DDX1Q92499 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
DDX1Q92499 NOL8P1-201ENST00000508336 3529 ntBASIC4.78□□□□□ -1.64
DDX1Q92499 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.78□□□□□ -1.64
DDX1Q92499 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
DDX1Q92499 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
DDX1Q92499 RNU6-1155P-201ENST00000363554 107 ntBASIC4.78□□□□□ -1.64
DDX1Q92499 Y_RNA.255-201ENST00000364581 97 ntBASIC4.78□□□□□ -1.64
DDX1Q92499 MT-TG-201ENST00000387429 68 ntBASIC4.78□□□□□ -1.64
DDX1Q92499 AL109755.1-201ENST00000401791 649 ntBASIC4.78□□□□□ -1.64
DDX1Q92499 AC099677.1-201ENST00000420575 175 ntBASIC4.78□□□□□ -1.64
DDX1Q92499 MTCO2P27-201ENST00000420740 428 ntBASIC4.78□□□□□ -1.64
DDX1Q92499 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.78□□□□□ -1.64
DDX1Q92499 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC4.78□□□□□ -1.64
DDX1Q92499 BNIP3P2-201ENST00000441221 577 ntBASIC4.78□□□□□ -1.64
DDX1Q92499 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.78□□□□□ -1.64
DDX1Q92499 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC4.78□□□□□ -1.64
DDX1Q92499 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.78□□□□□ -1.64
DDX1Q92499 DHFRP3-201ENST00000455595 559 ntBASIC4.78□□□□□ -1.64
DDX1Q92499 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.78□□□□□ -1.64
DDX1Q92499 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.78□□□□□ -1.64
DDX1Q92499 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.78□□□□□ -1.64
DDX1Q92499 AC026801.2-201ENST00000515352 425 ntBASIC4.78□□□□□ -1.64
DDX1Q92499 RN7SKP256-201ENST00000517201 314 ntBASIC4.78□□□□□ -1.64
DDX1Q92499 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.78□□□□□ -1.64
DDX1Q92499 AP000827.1-201ENST00000527814 258 ntBASIC4.78□□□□□ -1.64
DDX1Q92499 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.78□□□□□ -1.64
DDX1Q92499 AL117187.1-201ENST00000555482 181 ntBASIC4.78□□□□□ -1.64
DDX1Q92499 AC068831.4-201ENST00000556118 109 ntBASIC4.78□□□□□ -1.64
DDX1Q92499 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.78□□□□□ -1.64
DDX1Q92499 AC019193.3-201ENST00000609144 554 ntBASIC4.78□□□□□ -1.64
DDX1Q92499 AC103710.2-201ENST00000609912 942 ntBASIC4.78□□□□□ -1.64
DDX1Q92499 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.78□□□□□ -1.64
DDX1Q92499 MTND4LP32-201ENST00000636111 270 ntBASIC4.78□□□□□ -1.64
DDX1Q92499 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
DDX1Q92499 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.78□□□□□ -1.64
DDX1Q92499 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
DDX1Q92499 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
DDX1Q92499 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.78□□□□□ -1.64
DDX1Q92499 MTCO1P12-201ENST00000414273 1543 ntBASIC4.77□□□□□ -1.65
DDX1Q92499 AC074029.4-201ENST00000624796 1859 ntBASIC4.77□□□□□ -1.65
DDX1Q92499 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
DDX1Q92499 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
DDX1Q92499 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.77□□□□□ -1.65
DDX1Q92499 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
DDX1Q92499 Y_RNA.193-201ENST00000363979 102 ntBASIC4.77□□□□□ -1.65
DDX1Q92499 Y_RNA.231-201ENST00000364358 102 ntBASIC4.77□□□□□ -1.65
DDX1Q92499 Y_RNA.339-201ENST00000365325 102 ntBASIC4.77□□□□□ -1.65
DDX1Q92499 Y_RNA.445-201ENST00000384168 102 ntBASIC4.77□□□□□ -1.65
DDX1Q92499 SNORD3H-201ENST00000384486 214 ntBASIC4.77□□□□□ -1.65
DDX1Q92499 MIR135A2-201ENST00000384854 100 ntBASIC4.77□□□□□ -1.65
DDX1Q92499 RNA5SP171-201ENST00000391071 115 ntBASIC4.77□□□□□ -1.65
DDX1Q92499 SNORA74C-2-201ENST00000411179 201 ntBASIC4.77□□□□□ -1.65
DDX1Q92499 RNA5SP107-201ENST00000411358 122 ntBASIC4.77□□□□□ -1.65
DDX1Q92499 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.77□□□□□ -1.65
DDX1Q92499 DUTP6-201ENST00000425573 462 ntBASIC4.77□□□□□ -1.65
DDX1Q92499 RPL23AP30-201ENST00000432419 501 ntBASIC4.77□□□□□ -1.65
DDX1Q92499 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
DDX1Q92499 AC012671.1-201ENST00000451912 203 ntBASIC4.77□□□□□ -1.65
DDX1Q92499 AL356010.1-201ENST00000456364 102 ntBASIC4.77□□□□□ -1.65
DDX1Q92499 AL135752.1-201ENST00000479477 471 ntBASIC4.77□□□□□ -1.65
DDX1Q92499 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.77□□□□□ -1.65
DDX1Q92499 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
DDX1Q92499 TTC39CP1-201ENST00000512513 755 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms