Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 AC018437.1-201ENST00000492214 406 ntBASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 DYNLL1P6-201ENST00000503440 264 ntBASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 IGHV3-63-201ENST00000518422 341 ntBASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 AC084364.2-201ENST00000546924 395 ntBASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 MIR4711-201ENST00000578274 70 ntBASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 ZNF876P-202ENST00000398732 1485 ntBASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 Y_RNA.447-201ENST00000384184 113 ntBASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 RNU6-222P-201ENST00000362438 107 ntBASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 Y_RNA.117-201ENST00000363294 101 ntBASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 Y_RNA.410-201ENST00000383992 113 ntBASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 RPL21P71-201ENST00000465598 459 ntBASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 AL035411.2-201ENST00000604022 421 ntBASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 SNRPFP3-201ENST00000457792 225 ntBASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 SYT14P1-201ENST00000481459 721 ntBASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 RN7SKP43-201ENST00000516173 320 ntBASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 RNU6-567P-201ENST00000516746 107 ntBASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 RNU6-1121P-201ENST00000516802 109 ntBASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 IGLVI-20-201ENST00000519296 130 ntBASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 OR7K1P-201ENST00000546439 926 ntBASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 MIR3129-201ENST00000581095 76 ntBASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 MTND5P27-201ENST00000428871 1720 ntBASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 AL596028.1-201ENST00000326971 197 ntBASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 XKRYP6-201ENST00000440468 1116 ntBASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 XKRYP3-201ENST00000442113 1116 ntBASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 AP000857.1-201ENST00000532151 543 ntBASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 U6.98-201ENST00000637157 84 ntBASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 AC009501.3-201ENST00000605001 1352 ntBASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 Y_RNA.453-201ENST00000384223 109 ntBASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 MTND2P11-201ENST00000423638 648 ntBASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 COX6CP2-201ENST00000444980 225 ntBASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 RPL23AP78-201ENST00000599928 470 ntBASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 AC091057.2-201ENST00000602594 792 ntBASIC0.7□□□□□ -2.3
SYNE2Q8WXH0 RNU4-78P-201ENST00000410940 126 ntBASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 FCF1P2-201ENST00000415284 583 ntBASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 AC244636.1-201ENST00000421152 228 ntBASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 BX679664.1-201ENST00000434429 253 ntBASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 AC090543.2-201ENST00000483963 348 ntBASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 AC093331.1-201ENST00000521474 169 ntBASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 DEFB108E-201ENST00000524692 240 ntBASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 AC008121.3-201ENST00000618726 433 ntBASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 Y_RNA.135-201ENST00000363439 95 ntBASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 AC244035.1-201ENST00000430042 390 ntBASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 AC097468.3-201ENST00000607956 456 ntBASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 FO624990.1-201ENST00000636373 85 ntBASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 MIR924-201ENST00000638017 53 ntBASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 AC093831.2-201ENST00000624393 3427 ntBASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 U8.8-201ENST00000365399 135 ntBASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 AL160275.2-201ENST00000412010 394 ntBASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 RPS29P29-201ENST00000456396 171 ntBASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 AP000942.1-201ENST00000463969 747 ntBASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 AC109464.2-201ENST00000510242 943 ntBASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 AC103968.1-201ENST00000557841 573 ntBASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 AC009314.1-201ENST00000603871 304 ntBASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 MIR6835-201ENST00000621552 64 ntBASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 RNU4-32P-201ENST00000363404 141 ntBASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 HMGB1P45-201ENST00000435986 653 ntBASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 AC110792.2-201ENST00000510278 224 ntBASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 RN7SKP60-201ENST00000516985 239 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms