Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 FCF1P2-201ENST00000415284 583 ntBASIC2.12□□□□□ -2.07
LMX1AQ8TE12 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.12□□□□□ -2.07
LMX1AQ8TE12 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.12□□□□□ -2.07
LMX1AQ8TE12 AC027644.1-201ENST00000419595 298 ntBASIC2.12□□□□□ -2.07
LMX1AQ8TE12 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.12□□□□□ -2.07
LMX1AQ8TE12 TMEM167AP1-201ENST00000423409 219 ntBASIC2.12□□□□□ -2.07
LMX1AQ8TE12 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.12□□□□□ -2.07
LMX1AQ8TE12 AL591806.2-201ENST00000433122 173 ntBASIC2.12□□□□□ -2.07
LMX1AQ8TE12 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.12□□□□□ -2.07
LMX1AQ8TE12 RPL23AP16-201ENST00000441715 421 ntBASIC2.12□□□□□ -2.07
LMX1AQ8TE12 AL096829.2-201ENST00000446582 742 ntBASIC2.12□□□□□ -2.07
LMX1AQ8TE12 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.12□□□□□ -2.07
LMX1AQ8TE12 AL359385.1-201ENST00000456509 365 ntBASIC2.12□□□□□ -2.07
LMX1AQ8TE12 AC068587.2-201ENST00000478386 781 ntBASIC2.12□□□□□ -2.07
LMX1AQ8TE12 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
LMX1AQ8TE12 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
LMX1AQ8TE12 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
LMX1AQ8TE12 AC048346.1-201ENST00000510247 144 ntBASIC2.12□□□□□ -2.07
LMX1AQ8TE12 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
LMX1AQ8TE12 SCARNA16.3-201ENST00000516595 184 ntBASIC2.12□□□□□ -2.07
LMX1AQ8TE12 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
LMX1AQ8TE12 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC2.12□□□□□ -2.07
LMX1AQ8TE12 ZNF705CP-201ENST00000530515 889 ntBASIC2.12□□□□□ -2.07
LMX1AQ8TE12 LSM6P2-201ENST00000552208 177 ntBASIC2.12□□□□□ -2.07
LMX1AQ8TE12 LRRC37A5P-203ENST00000580181 585 ntBASIC2.12□□□□□ -2.07
LMX1AQ8TE12 NRBF2P1-201ENST00000587407 859 ntBASIC2.12□□□□□ -2.07
LMX1AQ8TE12 AC106028.5-201ENST00000610332 395 ntBASIC2.12□□□□□ -2.07
LMX1AQ8TE12 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.12□□□□□ -2.07
LMX1AQ8TE12 AC104237.2-201ENST00000612456 443 ntBASIC2.12□□□□□ -2.07
LMX1AQ8TE12 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.12□□□□□ -2.07
LMX1AQ8TE12 AC009831.4-201ENST00000620744 325 ntBASIC2.12□□□□□ -2.07
LMX1AQ8TE12 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
LMX1AQ8TE12 AC093875.1-201ENST00000623688 504 ntBASIC2.12□□□□□ -2.07
LMX1AQ8TE12 PISRT1-201ENST00000626175 531 ntBASIC2.12□□□□□ -2.07
LMX1AQ8TE12 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.12□□□□□ -2.07
LMX1AQ8TE12 AL590396.4-201ENST00000636779 956 ntBASIC2.12□□□□□ -2.07
LMX1AQ8TE12 BX649567.1-201ENST00000642071 1134 ntBASIC2.12□□□□□ -2.07
LMX1AQ8TE12 ZNF271P-202ENST00000465539 1970 ntBASIC2.12□□□□□ -2.07
LMX1AQ8TE12 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.12□□□□□ -2.07
LMX1AQ8TE12 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.12□□□□□ -2.07
LMX1AQ8TE12 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
LMX1AQ8TE12 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
LMX1AQ8TE12 AC010680.1-201ENST00000590024 3590 ntBASIC2.11□□□□□ -2.07
LMX1AQ8TE12 RNU6-582P-201ENST00000362989 107 ntBASIC2.11□□□□□ -2.07
LMX1AQ8TE12 SNORA51.6-201ENST00000384151 125 ntBASIC2.11□□□□□ -2.07
LMX1AQ8TE12 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.11□□□□□ -2.07
LMX1AQ8TE12 DEFB130D-201ENST00000426866 237 ntBASIC2.11□□□□□ -2.07
LMX1AQ8TE12 AC079780.1-201ENST00000428259 207 ntBASIC2.11□□□□□ -2.07
LMX1AQ8TE12 AL512637.2-201ENST00000431287 1256 ntBASIC2.11□□□□□ -2.07
LMX1AQ8TE12 RPL17P35-201ENST00000432217 549 ntBASIC2.11□□□□□ -2.07
LMX1AQ8TE12 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.11□□□□□ -2.07
LMX1AQ8TE12 AC241584.1-201ENST00000438469 1241 ntBASIC2.11□□□□□ -2.07
LMX1AQ8TE12 MOB1AP2-201ENST00000446060 614 ntBASIC2.11□□□□□ -2.07
LMX1AQ8TE12 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.11□□□□□ -2.07
LMX1AQ8TE12 OR6K5P-201ENST00000447050 945 ntBASIC2.11□□□□□ -2.07
LMX1AQ8TE12 RPS20P24-201ENST00000457473 361 ntBASIC2.11□□□□□ -2.07
LMX1AQ8TE12 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.11□□□□□ -2.07
LMX1AQ8TE12 TRBV1-201ENST00000476502 284 ntBASIC2.11□□□□□ -2.07
LMX1AQ8TE12 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.11□□□□□ -2.07
LMX1AQ8TE12 AIG1P1-201ENST00000503376 148 ntBASIC2.11□□□□□ -2.07
LMX1AQ8TE12 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.11□□□□□ -2.07
LMX1AQ8TE12 AC112518.2-201ENST00000508565 425 ntBASIC2.11□□□□□ -2.07
LMX1AQ8TE12 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.11□□□□□ -2.07
LMX1AQ8TE12 RPPH1-2P-201ENST00000516688 293 ntBASIC2.11□□□□□ -2.07
LMX1AQ8TE12 AP003049.1-201ENST00000529418 457 ntBASIC2.11□□□□□ -2.07
LMX1AQ8TE12 EEF1B2P4-201ENST00000551398 348 ntBASIC2.11□□□□□ -2.07
LMX1AQ8TE12 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.11□□□□□ -2.07
LMX1AQ8TE12 MED28P6-201ENST00000558776 231 ntBASIC2.11□□□□□ -2.07
LMX1AQ8TE12 SULT1C2P1-202ENST00000562418 459 ntBASIC2.11□□□□□ -2.07
LMX1AQ8TE12 MIR4789-201ENST00000577469 82 ntBASIC2.11□□□□□ -2.07
LMX1AQ8TE12 FAM60BP-201ENST00000578364 658 ntBASIC2.11□□□□□ -2.07
LMX1AQ8TE12 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.11□□□□□ -2.07
LMX1AQ8TE12 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.11□□□□□ -2.07
LMX1AQ8TE12 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.11□□□□□ -2.07
LMX1AQ8TE12 DUXAP3-201ENST00000603616 594 ntBASIC2.11□□□□□ -2.07
LMX1AQ8TE12 AC055876.5-201ENST00000605667 259 ntBASIC2.11□□□□□ -2.07
LMX1AQ8TE12 AC245517.5-201ENST00000611529 162 ntBASIC2.11□□□□□ -2.07
LMX1AQ8TE12 AL160394.1-201ENST00000624765 724 ntBASIC2.11□□□□□ -2.07
LMX1AQ8TE12 AC091948.2-201ENST00000636510 279 ntBASIC2.11□□□□□ -2.07
LMX1AQ8TE12 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
LMX1AQ8TE12 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
LMX1AQ8TE12 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.11□□□□□ -2.07
LMX1AQ8TE12 AC111188.2-201ENST00000529697 1387 ntBASIC2.1□□□□□ -2.07
LMX1AQ8TE12 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
LMX1AQ8TE12 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.1□□□□□ -2.07
LMX1AQ8TE12 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.1□□□□□ -2.07
LMX1AQ8TE12 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.1□□□□□ -2.07
LMX1AQ8TE12 RNU6-207P-201ENST00000384137 107 ntBASIC2.1□□□□□ -2.07
LMX1AQ8TE12 MIR217-201ENST00000384817 110 ntBASIC2.1□□□□□ -2.07
LMX1AQ8TE12 MIR764-201ENST00000390811 85 ntBASIC2.1□□□□□ -2.07
LMX1AQ8TE12 AL023807.1-201ENST00000407932 359 ntBASIC2.1□□□□□ -2.07
LMX1AQ8TE12 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.1□□□□□ -2.07
LMX1AQ8TE12 RPL7P30-201ENST00000420888 709 ntBASIC2.1□□□□□ -2.07
LMX1AQ8TE12 AL035410.1-201ENST00000427409 427 ntBASIC2.1□□□□□ -2.07
LMX1AQ8TE12 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.1□□□□□ -2.07
LMX1AQ8TE12 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
LMX1AQ8TE12 AC004866.2-201ENST00000438285 481 ntBASIC2.1□□□□□ -2.07
LMX1AQ8TE12 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.1□□□□□ -2.07
LMX1AQ8TE12 IFNA11P-201ENST00000446352 526 ntBASIC2.1□□□□□ -2.07
LMX1AQ8TE12 SEPT14P24-201ENST00000447236 180 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms