Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC010329.2-201ENST00000595195 2737 ntBASIC3.57□□□□□ -1.84
LMO3Q8TAP4 AL117336.2-201ENST00000602435 335 ntBASIC3.57□□□□□ -1.84
LMO3Q8TAP4 AC245014.2-201ENST00000603689 287 ntBASIC3.57□□□□□ -1.84
LMO3Q8TAP4 AC007363.1-201ENST00000604736 620 ntBASIC3.57□□□□□ -1.84
LMO3Q8TAP4 AC246785.4-201ENST00000605374 287 ntBASIC3.57□□□□□ -1.84
LMO3Q8TAP4 HSPE1P14-201ENST00000605812 302 ntBASIC3.57□□□□□ -1.84
LMO3Q8TAP4 U3.45-201ENST00000607547 219 ntBASIC3.57□□□□□ -1.84
LMO3Q8TAP4 RNU6-87P-201ENST00000607561 108 ntBASIC3.57□□□□□ -1.84
LMO3Q8TAP4 AL020991.1-201ENST00000612314 373 ntBASIC3.57□□□□□ -1.84
LMO3Q8TAP4 AL355365.1-201ENST00000616480 294 ntBASIC3.57□□□□□ -1.84
LMO3Q8TAP4 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
LMO3Q8TAP4 AL445264.1-201ENST00000621719 171 ntBASIC3.57□□□□□ -1.84
LMO3Q8TAP4 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.57□□□□□ -1.84
LMO3Q8TAP4 AP003122.6-201ENST00000623831 495 ntBASIC3.57□□□□□ -1.84
LMO3Q8TAP4 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.57□□□□□ -1.84
LMO3Q8TAP4 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
LMO3Q8TAP4 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LMO3Q8TAP4 TNPO1P3-201ENST00000436471 2662 ntBASIC3.57□□□□□ -1.84
LMO3Q8TAP4 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LMO3Q8TAP4 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
LMO3Q8TAP4 AC074029.4-201ENST00000624796 1859 ntBASIC3.56□□□□□ -1.84
LMO3Q8TAP4 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
LMO3Q8TAP4 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.56□□□□□ -1.84
LMO3Q8TAP4 MTND4P12-201ENST00000498999 1377 ntBASIC3.56□□□□□ -1.84
LMO3Q8TAP4 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
LMO3Q8TAP4 CBX3P1-201ENST00000325243 554 ntBASIC3.56□□□□□ -1.84
LMO3Q8TAP4 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
LMO3Q8TAP4 Y_RNA.46-201ENST00000362695 102 ntBASIC3.56□□□□□ -1.84
LMO3Q8TAP4 RNU1-33P-201ENST00000364249 162 ntBASIC3.56□□□□□ -1.84
LMO3Q8TAP4 RNU6-343P-201ENST00000364709 104 ntBASIC3.56□□□□□ -1.84
LMO3Q8TAP4 Y_RNA.409-201ENST00000383990 98 ntBASIC3.56□□□□□ -1.84
LMO3Q8TAP4 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
LMO3Q8TAP4 DSTNP4-201ENST00000399472 474 ntBASIC3.56□□□□□ -1.84
LMO3Q8TAP4 EIF5P1-201ENST00000400019 1231 ntBASIC3.56□□□□□ -1.84
LMO3Q8TAP4 RPL7P25-201ENST00000404151 721 ntBASIC3.56□□□□□ -1.84
LMO3Q8TAP4 HMGN1P24-201ENST00000412282 298 ntBASIC3.56□□□□□ -1.84
LMO3Q8TAP4 MTND3P17-201ENST00000416968 344 ntBASIC3.56□□□□□ -1.84
LMO3Q8TAP4 RPS3AP9-201ENST00000417027 792 ntBASIC3.56□□□□□ -1.84
LMO3Q8TAP4 AC016831.2-201ENST00000417179 352 ntBASIC3.56□□□□□ -1.84
LMO3Q8TAP4 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.56□□□□□ -1.84
LMO3Q8TAP4 AC012065.2-201ENST00000421295 375 ntBASIC3.56□□□□□ -1.84
LMO3Q8TAP4 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.56□□□□□ -1.84
LMO3Q8TAP4 AC012498.1-201ENST00000424037 437 ntBASIC3.56□□□□□ -1.84
LMO3Q8TAP4 AL159987.2-201ENST00000432754 307 ntBASIC3.56□□□□□ -1.84
LMO3Q8TAP4 USP9YP8-201ENST00000441913 500 ntBASIC3.56□□□□□ -1.84
LMO3Q8TAP4 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.56□□□□□ -1.84
LMO3Q8TAP4 TPT1P14-201ENST00000448018 505 ntBASIC3.56□□□□□ -1.84
LMO3Q8TAP4 AP000542.1-201ENST00000448473 371 ntBASIC3.56□□□□□ -1.84
LMO3Q8TAP4 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.56□□□□□ -1.84
LMO3Q8TAP4 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.56□□□□□ -1.84
LMO3Q8TAP4 MTND1P11-201ENST00000456661 876 ntBASIC3.56□□□□□ -1.84
LMO3Q8TAP4 FAM172BP-201ENST00000487497 1089 ntBASIC3.56□□□□□ -1.84
LMO3Q8TAP4 AC106872.2-201ENST00000494303 480 ntBASIC3.56□□□□□ -1.84
LMO3Q8TAP4 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.56□□□□□ -1.84
LMO3Q8TAP4 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.56□□□□□ -1.84
LMO3Q8TAP4 SLC25A15P5-201ENST00000508033 253 ntBASIC3.56□□□□□ -1.84
LMO3Q8TAP4 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.56□□□□□ -1.84
LMO3Q8TAP4 Y_RNA.672-201ENST00000516289 104 ntBASIC3.56□□□□□ -1.84
LMO3Q8TAP4 RN7SKP116-201ENST00000516902 319 ntBASIC3.56□□□□□ -1.84
LMO3Q8TAP4 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.56□□□□□ -1.84
LMO3Q8TAP4 AP003034.1-201ENST00000534621 422 ntBASIC3.56□□□□□ -1.84
LMO3Q8TAP4 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.56□□□□□ -1.84
LMO3Q8TAP4 HMGB3P26-201ENST00000560051 582 ntBASIC3.56□□□□□ -1.84
LMO3Q8TAP4 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
LMO3Q8TAP4 MIR4444-1-201ENST00000581696 74 ntBASIC3.56□□□□□ -1.84
LMO3Q8TAP4 MIR4444-2-201ENST00000584390 74 ntBASIC3.56□□□□□ -1.84
LMO3Q8TAP4 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.56□□□□□ -1.84
LMO3Q8TAP4 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.56□□□□□ -1.84
LMO3Q8TAP4 AL391646.1-201ENST00000603860 190 ntBASIC3.56□□□□□ -1.84
LMO3Q8TAP4 AC245389.1-201ENST00000605141 529 ntBASIC3.56□□□□□ -1.84
LMO3Q8TAP4 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.56□□□□□ -1.84
LMO3Q8TAP4 AC009268.2-201ENST00000621925 457 ntBASIC3.56□□□□□ -1.84
LMO3Q8TAP4 AC099654.10-201ENST00000640395 161 ntBASIC3.56□□□□□ -1.84
LMO3Q8TAP4 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
LMO3Q8TAP4 XPOTP1-201ENST00000443317 2398 ntBASIC3.56□□□□□ -1.84
LMO3Q8TAP4 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.56□□□□□ -1.84
LMO3Q8TAP4 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.55□□□□□ -1.84
LMO3Q8TAP4 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
LMO3Q8TAP4 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
LMO3Q8TAP4 MTND4P29-201ENST00000503122 1372 ntBASIC3.55□□□□□ -1.84
LMO3Q8TAP4 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
LMO3Q8TAP4 GNG5P1-201ENST00000255500 204 ntBASIC3.55□□□□□ -1.84
LMO3Q8TAP4 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.55□□□□□ -1.84
LMO3Q8TAP4 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
LMO3Q8TAP4 MIR92A2-201ENST00000385299 75 ntBASIC3.55□□□□□ -1.84
LMO3Q8TAP4 RNU6-876P-201ENST00000391295 104 ntBASIC3.55□□□□□ -1.84
LMO3Q8TAP4 AC016769.3-201ENST00000396562 315 ntBASIC3.55□□□□□ -1.84
LMO3Q8TAP4 USP9YP27-201ENST00000418455 438 ntBASIC3.55□□□□□ -1.84
LMO3Q8TAP4 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.55□□□□□ -1.84
LMO3Q8TAP4 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.55□□□□□ -1.84
LMO3Q8TAP4 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.55□□□□□ -1.84
LMO3Q8TAP4 FCF1P1-201ENST00000432690 571 ntBASIC3.55□□□□□ -1.84
LMO3Q8TAP4 AC002486.1-201ENST00000435098 391 ntBASIC3.55□□□□□ -1.84
LMO3Q8TAP4 RPL23AP74-201ENST00000437246 471 ntBASIC3.55□□□□□ -1.84
LMO3Q8TAP4 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.55□□□□□ -1.84
LMO3Q8TAP4 Z95327.1-201ENST00000446082 482 ntBASIC3.55□□□□□ -1.84
LMO3Q8TAP4 ELOCP23-201ENST00000452014 332 ntBASIC3.55□□□□□ -1.84
LMO3Q8TAP4 BX322784.1-201ENST00000455793 1077 ntBASIC3.55□□□□□ -1.84
LMO3Q8TAP4 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.55□□□□□ -1.84
LMO3Q8TAP4 AC010493.1-201ENST00000513479 292 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms