Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 RPL7P12-201ENST00000446719 750 ntBASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 AL451050.1-201ENST00000450126 415 ntBASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 HMGN2P26-201ENST00000463169 339 ntBASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 RPL23AP41-201ENST00000484754 458 ntBASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 RPL30P11-201ENST00000495304 339 ntBASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 HSPD1P15-201ENST00000505573 1122 ntBASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 AC021146.1-201ENST00000511202 716 ntBASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 SNORD27.1-201ENST00000516319 72 ntBASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 SNORA74D-201ENST00000516404 141 ntBASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 RNU7-30P-201ENST00000516835 62 ntBASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 RNU6-352P-201ENST00000516908 107 ntBASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 SNORA70.24-201ENST00000517233 118 ntBASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 PSMA2P1-201ENST00000526365 646 ntBASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 AC069240.1-201ENST00000548774 375 ntBASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 MTND6P33-201ENST00000571794 183 ntBASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 AC123786.2-201ENST00000603459 275 ntBASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 Z84480.1-201ENST00000605131 311 ntBASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 AL160281.1-201ENST00000605307 311 ntBASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 uc_338.5-201ENST00000611839 155 ntBASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 AC015967.1-201ENST00000619893 476 ntBASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 MIR7154-201ENST00000620673 73 ntBASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 TPTEP1-208ENST00000636884 213 ntBASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 AC074029.4-201ENST00000624796 1859 ntBASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 AC114546.3-201ENST00000623582 1734 ntBASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.15□□□□□ -1.75
SLC44A3Q8N4M1 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 AC073346.2-201ENST00000624724 2058 ntBASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 Y_RNA.138-201ENST00000363462 102 ntBASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 Y_RNA.184-201ENST00000363884 108 ntBASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 RNU6-1207P-201ENST00000384343 107 ntBASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 RNU6-606P-201ENST00000384721 111 ntBASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 PTMAP5-201ENST00000393073 333 ntBASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 AL591416.1-201ENST00000404015 867 ntBASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 RNU2-21P-201ENST00000410368 188 ntBASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 BTF3L4P3-201ENST00000418879 476 ntBASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 RPS15AP12-201ENST00000419498 388 ntBASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 AC012065.2-201ENST00000421295 375 ntBASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 AL645937.1-202ENST00000421799 937 ntBASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 AC009965.2-201ENST00000425328 970 ntBASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 AC079781.2-201ENST00000446424 169 ntBASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 MTND4P19-201ENST00000446659 478 ntBASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 ABCF2P2-201ENST00000450549 296 ntBASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 AL162388.1-201ENST00000450912 352 ntBASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 AC104308.1-201ENST00000454621 333 ntBASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 FGF7P3-201ENST00000454645 303 ntBASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 RNU7-63P-201ENST00000459054 62 ntBASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 RPL29P14-201ENST00000495837 428 ntBASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 EIF4EP3-201ENST00000498782 656 ntBASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 SNORA19.2-201ENST00000516013 114 ntBASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 RNU6-410P-201ENST00000517006 107 ntBASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 AP003497.1-201ENST00000528472 562 ntBASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 OR5BN1P-201ENST00000532955 829 ntBASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 AC087241.2-201ENST00000535801 324 ntBASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 SCOCP1-201ENST00000554676 349 ntBASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 AC105429.2-201ENST00000610567 517 ntBASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 AC123768.4-201ENST00000616244 701 ntBASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 uc_338.12-201ENST00000616344 181 ntBASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 AC002550.2-201ENST00000621246 394 ntBASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
SLC44A3Q8N4M1 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms