Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 AL136964.1-201ENST00000622038 2990 ntBASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 MAPK10-373ENST00000641983 6772 ntBASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 SNORA72.1-201ENST00000363485 129 ntBASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 Y_RNA.159-201ENST00000363674 87 ntBASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 RNY1P12-201ENST00000364251 105 ntBASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 RNU6-534P-201ENST00000364877 106 ntBASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 RNA5SP97-201ENST00000365006 84 ntBASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 AC068538.1-201ENST00000376856 336 ntBASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 RNU6-213P-201ENST00000384051 104 ntBASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 RNU6-456P-201ENST00000384493 107 ntBASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 RNU1-13P-201ENST00000384499 162 ntBASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 MIR124-3-201ENST00000384866 87 ntBASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 RNU6-328P-201ENST00000390887 106 ntBASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 AL353193.1-201ENST00000421444 268 ntBASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 RPL21P109-201ENST00000422213 475 ntBASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 AC092832.1-201ENST00000422934 400 ntBASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 RPS27AP12-201ENST00000429552 465 ntBASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 ARF4P2-201ENST00000430209 526 ntBASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 AL117339.2-201ENST00000430475 180 ntBASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 EZH2P1-201ENST00000431167 291 ntBASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 OR4C10P-201ENST00000434991 931 ntBASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 USP9YP7-201ENST00000436723 430 ntBASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 AC114755.5-201ENST00000447760 831 ntBASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 MTND3P10-201ENST00000450967 341 ntBASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 MRPS31P2-201ENST00000451581 518 ntBASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 USP9YP32-201ENST00000452432 430 ntBASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 snoU13.3-201ENST00000459441 104 ntBASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 RNU6-27P-201ENST00000516146 107 ntBASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 RNU6-352P-201ENST00000516908 107 ntBASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 RNU6-528P-201ENST00000516926 100 ntBASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 AC022695.1-201ENST00000522089 237 ntBASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 AC008752.3-201ENST00000588113 712 ntBASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 AC103710.3-201ENST00000608157 948 ntBASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 AL590099.1-201ENST00000615276 138 ntBASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 AC112204.3-201ENST00000623822 332 ntBASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 AC009902.3-201ENST00000606235 2172 ntBASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 FAM91A3P-201ENST00000456826 2544 ntBASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 AC138915.3-201ENST00000562908 1389 ntBASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CLIP4Q8N3C7 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.49□□□□□ -1.85
CLIP4Q8N3C7 AC073073.2-201ENST00000609827 2578 ntBASIC3.49□□□□□ -1.85
CLIP4Q8N3C7 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
CLIP4Q8N3C7 SPRR2C-201ENST00000290702 219 ntBASIC3.49□□□□□ -1.85
CLIP4Q8N3C7 RNU6-169P-201ENST00000365336 107 ntBASIC3.49□□□□□ -1.85
CLIP4Q8N3C7 U3.15-201ENST00000365398 212 ntBASIC3.49□□□□□ -1.85
CLIP4Q8N3C7 RNU6-877P-201ENST00000383868 107 ntBASIC3.49□□□□□ -1.85
CLIP4Q8N3C7 Y_RNA.481-201ENST00000384373 102 ntBASIC3.49□□□□□ -1.85
CLIP4Q8N3C7 RNU6-114P-201ENST00000384704 105 ntBASIC3.49□□□□□ -1.85
CLIP4Q8N3C7 RNU6-876P-201ENST00000391295 104 ntBASIC3.49□□□□□ -1.85
CLIP4Q8N3C7 AL391417.1-201ENST00000404100 426 ntBASIC3.49□□□□□ -1.85
CLIP4Q8N3C7 ELOCP4-201ENST00000420090 333 ntBASIC3.49□□□□□ -1.85
CLIP4Q8N3C7 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.49□□□□□ -1.85
CLIP4Q8N3C7 C4BPAP2-201ENST00000428434 478 ntBASIC3.49□□□□□ -1.85
CLIP4Q8N3C7 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.49□□□□□ -1.85
CLIP4Q8N3C7 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.49□□□□□ -1.85
CLIP4Q8N3C7 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.49□□□□□ -1.85
CLIP4Q8N3C7 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.49□□□□□ -1.85
CLIP4Q8N3C7 AL121601.2-201ENST00000438019 707 ntBASIC3.49□□□□□ -1.85
CLIP4Q8N3C7 HMGB3P12-201ENST00000438745 556 ntBASIC3.49□□□□□ -1.85
CLIP4Q8N3C7 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.49□□□□□ -1.85
CLIP4Q8N3C7 Z95327.1-201ENST00000446082 482 ntBASIC3.49□□□□□ -1.85
CLIP4Q8N3C7 MTND5P20-201ENST00000448677 143 ntBASIC3.49□□□□□ -1.85
CLIP4Q8N3C7 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.49□□□□□ -1.85
CLIP4Q8N3C7 SNRPGP5-201ENST00000456003 220 ntBASIC3.49□□□□□ -1.85
CLIP4Q8N3C7 AC098799.2-201ENST00000509466 868 ntBASIC3.49□□□□□ -1.85
CLIP4Q8N3C7 RNU6-1281P-201ENST00000516223 105 ntBASIC3.49□□□□□ -1.85
CLIP4Q8N3C7 RN7SKP116-201ENST00000516902 319 ntBASIC3.49□□□□□ -1.85
CLIP4Q8N3C7 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.49□□□□□ -1.85
CLIP4Q8N3C7 AC022616.3-201ENST00000523940 148 ntBASIC3.49□□□□□ -1.85
CLIP4Q8N3C7 AP003385.6-201ENST00000531603 374 ntBASIC3.49□□□□□ -1.85
CLIP4Q8N3C7 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.49□□□□□ -1.85
CLIP4Q8N3C7 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CLIP4Q8N3C7 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.49□□□□□ -1.85
CLIP4Q8N3C7 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.49□□□□□ -1.85
CLIP4Q8N3C7 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.49□□□□□ -1.85
CLIP4Q8N3C7 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.49□□□□□ -1.85
CLIP4Q8N3C7 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.49□□□□□ -1.85
CLIP4Q8N3C7 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.49□□□□□ -1.85
CLIP4Q8N3C7 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.49□□□□□ -1.85
CLIP4Q8N3C7 HMGN2P28-201ENST00000606102 262 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms