Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.64□□□□□ -1.51
TRIM50Q86XT4 AL583843.1-201ENST00000456070 346 ntBASIC5.64□□□□□ -1.51
TRIM50Q86XT4 RN7SL319P-201ENST00000480656 221 ntBASIC5.64□□□□□ -1.51
TRIM50Q86XT4 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.64□□□□□ -1.51
TRIM50Q86XT4 MTND3P25-201ENST00000509243 135 ntBASIC5.64□□□□□ -1.51
TRIM50Q86XT4 GMPSP1-201ENST00000514075 579 ntBASIC5.64□□□□□ -1.51
TRIM50Q86XT4 SNORD116-26-201ENST00000516006 96 ntBASIC5.64□□□□□ -1.51
TRIM50Q86XT4 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.64□□□□□ -1.51
TRIM50Q86XT4 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM50Q86XT4 AC009643.1-201ENST00000532030 391 ntBASIC5.64□□□□□ -1.51
TRIM50Q86XT4 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC5.64□□□□□ -1.51
TRIM50Q86XT4 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.64□□□□□ -1.51
TRIM50Q86XT4 AC005951.2-201ENST00000576282 495 ntBASIC5.64□□□□□ -1.51
TRIM50Q86XT4 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM50Q86XT4 AC006272.2-201ENST00000594725 163 ntBASIC5.64□□□□□ -1.51
TRIM50Q86XT4 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM50Q86XT4 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM50Q86XT4 HMGB1P24-202ENST00000615653 685 ntBASIC5.64□□□□□ -1.51
TRIM50Q86XT4 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.64□□□□□ -1.51
TRIM50Q86XT4 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM50Q86XT4 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM50Q86XT4 AC073136.1-201ENST00000449426 2884 ntBASIC5.64□□□□□ -1.51
TRIM50Q86XT4 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM50Q86XT4 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM50Q86XT4 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM50Q86XT4 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM50Q86XT4 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
TRIM50Q86XT4 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM50Q86XT4 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM50Q86XT4 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM50Q86XT4 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM50Q86XT4 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM50Q86XT4 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
TRIM50Q86XT4 SCARNA15-201ENST00000607520 4325 ntBASIC5.63□□□□□ -1.51
TRIM50Q86XT4 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM50Q86XT4 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
TRIM50Q86XT4 RNA5SP191-201ENST00000362585 102 ntBASIC5.63□□□□□ -1.51
TRIM50Q86XT4 RN7SKP113-201ENST00000363891 295 ntBASIC5.63□□□□□ -1.51
TRIM50Q86XT4 SNORA2.3-201ENST00000383920 135 ntBASIC5.63□□□□□ -1.51
TRIM50Q86XT4 MIR578-201ENST00000384828 96 ntBASIC5.63□□□□□ -1.51
TRIM50Q86XT4 AL353997.1-201ENST00000432936 108 ntBASIC5.63□□□□□ -1.51
TRIM50Q86XT4 RPL21P2-201ENST00000440049 481 ntBASIC5.63□□□□□ -1.51
TRIM50Q86XT4 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.63□□□□□ -1.51
TRIM50Q86XT4 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.63□□□□□ -1.51
TRIM50Q86XT4 CEACAMP6-201ENST00000452007 574 ntBASIC5.63□□□□□ -1.51
TRIM50Q86XT4 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.63□□□□□ -1.51
TRIM50Q86XT4 AP000942.1-201ENST00000463969 747 ntBASIC5.63□□□□□ -1.51
TRIM50Q86XT4 RPS29P22-201ENST00000472363 168 ntBASIC5.63□□□□□ -1.51
TRIM50Q86XT4 AC008897.1-201ENST00000494006 347 ntBASIC5.63□□□□□ -1.51
TRIM50Q86XT4 AC023424.1-201ENST00000496058 459 ntBASIC5.63□□□□□ -1.51
TRIM50Q86XT4 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.63□□□□□ -1.51
TRIM50Q86XT4 RNU6-914P-201ENST00000516749 109 ntBASIC5.63□□□□□ -1.51
TRIM50Q86XT4 AC022616.4-201ENST00000522985 181 ntBASIC5.63□□□□□ -1.51
TRIM50Q86XT4 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC5.63□□□□□ -1.51
TRIM50Q86XT4 AP000827.1-201ENST00000527814 258 ntBASIC5.63□□□□□ -1.51
TRIM50Q86XT4 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.63□□□□□ -1.51
TRIM50Q86XT4 BNIP3P1-201ENST00000547295 580 ntBASIC5.63□□□□□ -1.51
TRIM50Q86XT4 EDDM3DP-201ENST00000554692 434 ntBASIC5.63□□□□□ -1.51
TRIM50Q86XT4 SUB1P3-201ENST00000564581 315 ntBASIC5.63□□□□□ -1.51
TRIM50Q86XT4 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC5.63□□□□□ -1.51
TRIM50Q86XT4 RN7SL290P-201ENST00000578661 300 ntBASIC5.63□□□□□ -1.51
TRIM50Q86XT4 MIR4330-201ENST00000579077 105 ntBASIC5.63□□□□□ -1.51
TRIM50Q86XT4 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC5.63□□□□□ -1.51
TRIM50Q86XT4 MIR7703-201ENST00000620784 77 ntBASIC5.63□□□□□ -1.51
TRIM50Q86XT4 AL031601.2-202ENST00000622650 282 ntBASIC5.63□□□□□ -1.51
TRIM50Q86XT4 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.63□□□□□ -1.51
TRIM50Q86XT4 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC5.63□□□□□ -1.51
TRIM50Q86XT4 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
TRIM50Q86XT4 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
TRIM50Q86XT4 ZNF285B-201ENST00000561698 1767 ntBASIC5.62□□□□□ -1.51
TRIM50Q86XT4 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.62□□□□□ -1.51
TRIM50Q86XT4 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM50Q86XT4 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
TRIM50Q86XT4 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM50Q86XT4 Y_RNA.106-201ENST00000363189 100 ntBASIC5.62□□□□□ -1.51
TRIM50Q86XT4 DEFB109C-201ENST00000382575 264 ntBASIC5.62□□□□□ -1.51
TRIM50Q86XT4 DEFB109B-201ENST00000382656 264 ntBASIC5.62□□□□□ -1.51
TRIM50Q86XT4 Y_RNA.396-201ENST00000383949 103 ntBASIC5.62□□□□□ -1.51
TRIM50Q86XT4 RNU6-76P-201ENST00000384060 104 ntBASIC5.62□□□□□ -1.51
TRIM50Q86XT4 Y_RNA.489-201ENST00000384410 101 ntBASIC5.62□□□□□ -1.51
TRIM50Q86XT4 RNU6-882P-201ENST00000391025 103 ntBASIC5.62□□□□□ -1.51
TRIM50Q86XT4 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC5.62□□□□□ -1.51
TRIM50Q86XT4 BX276092.3-201ENST00000424182 230 ntBASIC5.62□□□□□ -1.51
TRIM50Q86XT4 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.62□□□□□ -1.51
TRIM50Q86XT4 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.62□□□□□ -1.51
TRIM50Q86XT4 DYNLT3P2-201ENST00000442517 295 ntBASIC5.62□□□□□ -1.51
TRIM50Q86XT4 RPL29P29-201ENST00000448725 423 ntBASIC5.62□□□□□ -1.51
TRIM50Q86XT4 RPS23P3-201ENST00000470993 430 ntBASIC5.62□□□□□ -1.51
TRIM50Q86XT4 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.62□□□□□ -1.51
TRIM50Q86XT4 RNY3P15-201ENST00000516297 97 ntBASIC5.62□□□□□ -1.51
TRIM50Q86XT4 SNORA31.22-201ENST00000517204 135 ntBASIC5.62□□□□□ -1.51
TRIM50Q86XT4 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.62□□□□□ -1.51
TRIM50Q86XT4 SNRPGP16-201ENST00000533275 226 ntBASIC5.62□□□□□ -1.51
TRIM50Q86XT4 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.62□□□□□ -1.51
TRIM50Q86XT4 BNIP3P5-201ENST00000562290 498 ntBASIC5.62□□□□□ -1.51
TRIM50Q86XT4 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
TRIM50Q86XT4 MIR4737-201ENST00000583979 81 ntBASIC5.62□□□□□ -1.51
TRIM50Q86XT4 AL021879.1-201ENST00000611756 288 ntBASIC5.62□□□□□ -1.51
TRIM50Q86XT4 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.62□□□□□ -1.51
TRIM50Q86XT4 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms